Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CIITA

Gene Name Gene ID Reads Annotation
CIITA ENSG00000179583 4 class II major histocompatibility complex transactivator [Source:HGNC Symbol;Acc:HGNC:7067]



Genes with expression patterns similar to CIITA

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. CIITA ENSG00000179583 4 2 1.000 1.000 class II major histocompatibility complex transactivator [Source:HGNC Symbol;Acc:HGNC:7067]
2. RBMY2FP ENSG00000243040 6 1 - 1.000 RNA binding motif protein, Y-linked, family 2, member F pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]
3. MLIP-IT1 ENSG00000236996 2 0.957 - 0.957 MLIP intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41461]
4. PROP1 ENSG00000175325, ENSG00000274382, ENSG00000280635 1 0.957 - 0.957 PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]
5. HOTS 2 0.957 - 0.957 H19 opposite tumor suppressor
6. PATE1 ENSG00000171053 2 0.957 - 0.957 prostate and testis expressed 1 [Source:HGNC Symbol;Acc:HGNC:24664]
7. ADAM29 ENSG00000168594 1 0.957 - 0.957 ADAM metallopeptidase domain 29 [Source:HGNC Symbol;Acc:HGNC:207]
8. POM121L2 ENSG00000158553 3 0.957 - 0.957 POM121 transmembrane nucleoporin like 2 [Source:HGNC Symbol;Acc:HGNC:13973]
9. LOC100130849 1 0.957 - 0.957 phosphorylase kinase gamma subunit 1 pseudogene
10. FLJ40288 ENSG00000183470 4 0.957 - 0.957 uncharacterized FLJ40288 [Source:NCBI gene;Acc:286023]
11. CAPNS2 ENSG00000256812 2 0.957 - 0.957 calpain small subunit 2 [Source:HGNC Symbol;Acc:HGNC:16371]
12. SLC5A11 ENSG00000158865 1 0.957 - 0.957 solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
13. LOC101927919 3 0.957 - 0.957 uncharacterized LOC101927919
14. FAM99A ENSG00000205866, ENSG00000281261, ENSG00000281733 1 0.957 - 0.957 family with sequence similarity 99 member A [Source:HGNC Symbol;Acc:HGNC:32368]
15. FCRL5 ENSG00000143297 1 0.957 - 0.957 Fc receptor like 5 [Source:HGNC Symbol;Acc:HGNC:18508]
16. FOXH1 ENSG00000160973 2 0.957 - 0.957 forkhead box H1 [Source:HGNC Symbol;Acc:HGNC:3814]
17. CYP8B1 ENSG00000180432 2 0.957 - 0.957 cytochrome P450 family 8 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2653]
18. CELF2-AS2 ENSG00000237986 1 0.957 - 0.957 CELF2 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:44703]
19. PROL1 PROL1 1 0.957 - 0.957
20. SLC26A9 ENSG00000174502 8 0.957 - 0.957 solute carrier family 26 member 9 [Source:HGNC Symbol;Acc:HGNC:14469]
21. FAM9C ENSG00000187268 3 0.954 - 0.954 family with sequence similarity 9 member C [Source:HGNC Symbol;Acc:HGNC:18405]
22. MASP2 ENSG00000009724 4 0.938 - 0.938 mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]
23. CCL19 ENSG00000172724 1 0.937 - 0.937 C-C motif chemokine ligand 19 [Source:HGNC Symbol;Acc:HGNC:10617]
24. LSAMP-AS1 ENSG00000240922 2 0.932 - 0.932 LSAMP antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40350]
25. INHBC ENSG00000175189 2 0.93 - 0.930 inhibin subunit beta C [Source:HGNC Symbol;Acc:HGNC:6068]
26. IRGM ENSG00000237693 1 0.916 - 0.916 immunity related GTPase M [Source:HGNC Symbol;Acc:HGNC:29597]
27. LINC01179 ENSG00000249500 9 0.916 - 0.916 long intergenic non-protein coding RNA 1179 [Source:HGNC Symbol;Acc:HGNC:49556]
28. OIT3 ENSG00000138315 41 0.916 - 0.916 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
29. TMED6 ENSG00000157315 9 0.911 - 0.911 transmembrane p24 trafficking protein 6 [Source:HGNC Symbol;Acc:HGNC:28331]
30. BPIFB2 ENSG00000078898 3 0.902 - 0.902 BPI fold containing family B member 2 [Source:HGNC Symbol;Acc:HGNC:16177]
31. EPHA1 ENSG00000146904, ENSG00000284816 6 0.896 - 0.896 EPH receptor A1 [Source:HGNC Symbol;Acc:HGNC:3385]
32. SNORA4 ENSG00000263776 1 0.895 - 0.895 small nucleolar RNA, H/ACA box 4 [Source:HGNC Symbol;Acc:HGNC:32587]
33. RIMS4 ENSG00000101098 4 0.892 0.892 - regulating synaptic membrane exocytosis 4 [Source:HGNC Symbol;Acc:HGNC:16183]
34. URAHP ENSG00000222019 2 0.892 0.892 - urate (hydroxyiso-) hydrolase, pseudogene [Source:HGNC Symbol;Acc:HGNC:43695]
35. NPHP3-ACAD11 ENSG00000274810 4 0.892 0.892 - NPHP3-ACAD11 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:48351]
36. SLC52A1 ENSG00000132517 3 0.892 0.892 - solute carrier family 52 member 1 [Source:HGNC Symbol;Acc:HGNC:30225]
37. EPS8L3 ENSG00000198758 4 0.892 0.892 - EPS8 like 3 [Source:HGNC Symbol;Acc:HGNC:21297]
38. GOLGA8J ENSG00000179938, ENSG00000283465 3 0.892 0.892 - golgin A8 family member J [Source:HGNC Symbol;Acc:HGNC:38650]
39. BEST1 ENSG00000167995 3 0.88 - 0.880 bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
40. BCAS1 ENSG00000064787 63 0.867 - 0.867 breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
41. LOC100506725 51 0.859 0.859 - uncharacterized LOC100506725, transcript variant 2
42. LOC100506985 4 0.856 - 0.856 uncharacterized LOC100506985
43. GPR39 ENSG00000183840 5 0.852 - 0.852 G protein-coupled receptor 39 [Source:HGNC Symbol;Acc:HGNC:4496]
44. PSCA ENSG00000167653 9 0.839 0.839 - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
45. DKFZp686K1684 14 0.839 - 0.839 uncharacterized LOC440034
46. PNLIPRP2 ENSG00000266200 8 0.829 - 0.829 pancreatic lipase related protein 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:9157]
47. SLC22A3 ENSG00000146477 28 0.828 0.828 - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
48. CDKN2B-AS1 ENSG00000240498 7 0.822 - 0.822 CDKN2B antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:34341]
49. LOC101928535 50 0.81 - 0.810 uncharacterized LOC101928535, transcript variant 2
50. MUC7 ENSG00000171195 13 0.795 - 0.795 mucin 7, secreted [Source:HGNC Symbol;Acc:HGNC:7518]
51. ITGB7 ENSG00000139626 17 0.791 0.791 - integrin subunit beta 7 [Source:HGNC Symbol;Acc:HGNC:6162]
52. NPPA ENSG00000175206 27 0.791 0.791 - natriuretic peptide A [Source:HGNC Symbol;Acc:HGNC:7939]
53. LILRA5 ENSG00000187116, ENSG00000274113, ENSG00000274914, ENSG00000275404, ENSG00000278355 3 0.785 0.785 - leukocyte immunoglobulin like receptor A5 [Source:HGNC Symbol;Acc:HGNC:16309]
54. PRR26 ENSG00000180525 6 0.782 - 0.782 proline rich 26 [Source:HGNC Symbol;Acc:HGNC:30724]
55. MARVELD2 ENSG00000152939, ENSG00000274671 6 0.782 - 0.782 MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
56. KLHDC1 ENSG00000197776 92 0.774 0.774 - kelch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19836]
57. C16orf89 ENSG00000153446 7 0.773 0.773 - chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:HGNC:28687]
58. NUP210L ENSG00000143552 12 0.77 - 0.770 nucleoporin 210 like [Source:HGNC Symbol;Acc:HGNC:29915]
59. LOC100131496 22 0.77 - 0.770 uncharacterized LOC100131496
60. HMGCS2 ENSG00000134240 22 0.767 - 0.767 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
61. GYS2 ENSG00000111713 12 0.763 0.763 - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
62. PRRG2 ENSG00000126460 16 0.763 - 0.763 proline rich and Gla domain 2 [Source:HGNC Symbol;Acc:HGNC:9470]
63. AHSG ENSG00000145192 801 0.761 0.761 - alpha 2-HS glycoprotein [Source:HGNC Symbol;Acc:HGNC:349]
64. FLJ36777 15 0.761 - 0.761 uncharacterized LOC730971
65. LOC100507351 25 0.752 - 0.752 uncharacterized LOC100507351
66. NPB ENSG00000183979 12 0.74 0.740 - neuropeptide B [Source:HGNC Symbol;Acc:HGNC:30099]
67. SOAT2 ENSG00000167780 2 0.722 - 0.722 sterol O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:11178]
68. NDUFC2-KCTD14 ENSG00000259112 9 0.719 - 0.719 NDUFC2-KCTD14 readthrough [Source:HGNC Symbol;Acc:HGNC:42956]
69. CABP1 ENSG00000157782 31 0.718 0.718 - calcium binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1384]
70. LOC100190940 12 0.717 0.717 - uncharacterized LOC100190940
71. LINC00885 ENSG00000224652 6 0.712 0.712 - long intergenic non-protein coding RNA 885 [Source:HGNC Symbol;Acc:HGNC:48571]
72. CYLC2 ENSG00000155833 44 0.709 - 0.709 cylicin 2 [Source:HGNC Symbol;Acc:HGNC:2583]
73. SRD5A1P1 ENSG00000232549 13 0.708 0.708 - steroid 5 alpha-reductase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:11286]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA