Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNORA28

Gene Name Gene ID Reads Annotation
SNORA28 SNORA28 12











Genes with expression patterns similar to SNORA28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNORA28 SNORA28 12 5 - - 1.000 1.000 1.000 1.000 - - - 1.000
2. TTBK2 ENSGALG00000009176 196 1.448 - - 0.725 - 0.723 - - - - - tau tubulin kinase 2 [Source:HGNC Symbol;Acc:HGNC:19141]
3. CRCBL ENSGALG00000025881 3 1 - - 1.000 - - - - - - - cytokine receptor common subunit beta-like, transcript variant X3
4. ENSGALG00000005427 ENSGALG00000005427 4 1 - - 1.000 - - - - - - -
5. GREM2 ENSGALG00000010773 1 1 - - 1.000 - - - - - - - gremlin 2, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:17655]
6. ENSGALG00000026256 ENSGALG00000026256 3 1 - - 1.000 - - - - - - -
7. RAD21L1 ENSGALG00000006186 2 1 - - 1.000 - - - - - - - RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
8. HTR1A ENSGALG00000014742 2 1 - - 1.000 - - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
9. FAM237A ENSGALG00000020836 21 1 - - 1.000 - - - - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
10. GGACT ENSGALG00000022758 1 1 - - 1.000 - - - - - - - gamma-glutamylamine cyclotransferase [Source:HGNC Symbol;Acc:HGNC:25100]
11. RMST_1 RMST_1 1 1 - - 1.000 - - - - - - -
12. SUB1L1 ENSGALG00000027147 73 1 - - - - - 1.000 - - - - SUB1 homolog (S. cerevisiae)-like 1
13. TH ENSGALG00000029648 2 1 - - 1.000 - - - - - - - tyrosine hydroxylase [Source:NCBI gene;Acc:395592]
14. TMEM233 ENSGALG00000020975 1 1 - - 1.000 - - - - - - - transmembrane protein 233 [Source:HGNC Symbol;Acc:HGNC:37219]
15. CCDC122 ENSGALG00000016968 5 1 - - 1.000 - - - - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
16. SLC26A1 ENSGALG00000027423 1 1 - - 1.000 - - - - - - - solute carrier family 26 member 1 [Source:HGNC Symbol;Acc:HGNC:10993]
17. CA15L ENSGALG00000005896 4 1 - - 1.000 - - - - - - - carbonic anhydrase 15-like
18. KCNH8 ENSGALG00000011262 1 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily H member 8 [Source:HGNC Symbol;Acc:HGNC:18864]
19. PAQR5 ENSGALG00000008077 1 1 - - 1.000 - - - - - - - progestin and adipoQ receptor family member 5 [Source:HGNC Symbol;Acc:HGNC:29645]
20. SHC3 ENSGALG00000010688 1 1 - - 1.000 - - - - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
21. KLHDC10 ENSGALG00000008013 4 1 - - 1.000 - - - - - - - kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
22. TMC2 ENSGALG00000042706 1 1 - - 1.000 - - - - - - - transmembrane channel like 2 [Source:NCBI gene;Acc:428456]
23. LRRIQ4 ENSGALG00000009397 1 1 - - 1.000 - - - - - - - leucine rich repeats and IQ motif containing 4, transcript variant X2
24. B-G B-G 2 1 - - 1.000 - - - - - - -
25. SLC13A1 ENSGALG00000008874 2 1 - - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
26. ENSGALG00000015793 ENSGALG00000015793 12 1 - - 1.000 - - - - - - -
27. NAMA NAMA 1 1 - - 1.000 - - - - - - -
28. SNORD83 SNORD83 1 1 - - 1.000 - - - - - - -
29. ARSE ENSGALG00000016654 8 1 - - 1.000 - - - - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
30. PIFO ENSGALG00000023763 11 1 - - 1.000 - - - - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
31. LOC421584 ENSGALG00000011579 8 1 - - 1.000 - - - - - - - solute carrier family 22 member 2-like
32. SYCP1 ENSGALG00000002511 13 1 - - - - - 1.000 - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
33. EPSTI1 ENSGALG00000016964 6 1 - - 1.000 - - - - - - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
34. SEMA5A ENSGALG00000028685 6 1 - - 1.000 - - - - - - - semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
35. SS2R SS2R 3 1 - - 1.000 - - - - - - -
36. ENSGALG00000023475 ENSGALG00000023475 19 0.973 - - 0.973 - - - - - - -
37. ENSGALG00000007050 ENSGALG00000007050 28 0.946 - - - - - 0.946 - - - -
38. USH2A_1 ENSGALG00000009652 2 0.929 - - 0.929 - - - - - - - usherin, transcript variant X3
39. TSPAN18 ENSGALG00000036901 14 0.914 - - - - - 0.914 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
40. TNNC2 ENSGALG00000006835 2963 0.912 - - - - - 0.912 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
41. RGS19 ENSGALG00000021079 1 0.902 - - 0.902 - - - - - - - regulator of G protein signaling 19 [Source:NCBI gene;Acc:374070]
42. BDNF ENSGALG00000012163 159 0.879 - - - - - 0.879 - - - - brain derived neurotrophic factor [Source:NCBI gene;Acc:396186]
43. EGLN3 ENSGALG00000010001 32 0.874 - - - - - 0.874 - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
44. TAL2 ENSGALG00000023114 17 0.863 - - - - - 0.863 - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
45. RMST RMST 2 0.861 - - - - 0.861 - - - - -
46. PQLC3 ENSGALG00000016449 39 0.861 - - - - 0.861 - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
47. GDF10 ENSGALG00000005985 11 0.861 - - - - 0.861 - - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
48. TUSC5 15 0.861 - - - - 0.861 - - - - - tumor suppressor candidate 5
49. PLSCR5 ENSGALG00000006807 9 0.861 - - - - 0.861 - - - - - phospholipid scramblase family member 5 [Source:HGNC Symbol;Acc:HGNC:19952]
50. ASIC2 ENSGALG00000000367 72 0.858 - - - - - 0.858 - - - - acid sensing ion channel subunit 2, transcript variant X2
51. gga-mir-1458 ENSGALG00000030959 41 0.856 - - - - - 0.856 - - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
52. ENSGALG00000005148 ENSGALG00000005148 9 0.854 - - 0.854 - - - - - - -
53. MGAT4D ENSGALG00000009830 23 0.847 - - - - 0.847 - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
54. MEGF6L ENSGALG00000009458 14 0.842 - - - - - 0.842 - - - - multiple EGF-like-domains 6-like, transcript variant X21
55. HMGI-C HMGI-C 34 0.838 - - - - - 0.838 - - - -
56. CTSD ENSGALG00000006613 4 0.837 - - - - - 0.837 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
57. SERPINB5 ENSGALG00000012873 24 0.837 - - - - - 0.837 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
58. MAPK11 ENSGALG00000040023 15 0.837 - - - - - 0.837 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
59. FAM149B1 ENSGALG00000002693 16 0.837 - - - - - 0.837 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
60. TP63 ENSGALG00000007324 6 0.837 - - - - - 0.837 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
61. ENSGALG00000028531 ENSGALG00000028531 2 0.837 - - - - - 0.837 - - - -
62. MARCO ENSGALG00000012119 5 0.837 - - - - - 0.837 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
63. WDR63 ENSGALG00000008696 15 0.837 - - - - - 0.837 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
64. GVINP1 ENSGALG00000016556 4 0.837 - - - - - 0.837 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
65. ENSGALG00000022715 ENSGALG00000022715 13 0.837 - - - - - 0.837 - - - -
66. ACRBP 0 0.837 - - - - - 0.837 - - - - acrosin binding protein
67. FGL1 ENSGALG00000013606 42 0.837 - - - - - 0.837 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
68. P2RX3 ENSGALG00000040479 5 0.837 - - - - - 0.837 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
69. PAPPA ENSGALG00000007079 6 0.837 - - - - - 0.837 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
70. GPR12 ENSGALG00000017102 4 0.837 - - - - - 0.837 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
71. ENSGALG00000026368 ENSGALG00000026368 1 0.837 - - - - - 0.837 - - - -
72. ST6GALNAC3 ENSGALG00000009027 17 0.837 - - - - - 0.837 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
73. SRRM3 ENSGALG00000001932 12 0.837 - - - - - 0.837 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
74. DDTNFR23 ENSGALG00000006407 4 0.837 - - - - - 0.837 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
75. CFUC-TIX CFUC-TIX 1 0.837 - - - - - 0.837 - - - -
76. CHSY1 ENSGALG00000026468 4 0.837 - - - - - 0.837 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
77. SCARNA23 SCARNA23 2 0.837 - - - - - 0.837 - - - -
78. CCDC64 CCDC64 2 0.837 - - - - - 0.837 - - - -
79. KLHL23 ENSGALG00000020737 13 0.837 - - - - - 0.837 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
80. PPFIA2 ENSGALG00000010958 27 0.837 - - - - - 0.837 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
81. gga-let-7i ENSGALG00000018237 2 0.837 - - - - - 0.837 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
82. KCNC1 ENSGALG00000006220 15 0.837 - - - - - 0.837 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
83. EPHX2 ENSGALG00000016567 399 0.837 - - - - 0.837 - - - - - epoxide hydrolase 2 [Source:NCBI gene;Acc:421999]
84. DMP1 ENSGALG00000010927 5 0.837 - - - - - 0.837 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
85. TTC34 ENSGALG00000001081 8 0.837 - - - - - 0.837 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
86. HMX2 ENSGALG00000030875 10 0.837 - - - - - 0.837 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
87. ENSGALG00000015321 ENSGALG00000015321 18 0.837 - - - - - 0.837 - - - -
88. ATP7B ENSGALG00000017021 7 0.837 - - - - - 0.837 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
89. COTL1 ENSGALG00000017644 81 0.837 - - - - - 0.837 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
90. SLCO4C1 ENSGALG00000026768 30 0.837 - - - - - 0.837 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
91. BANK1 ENSGALG00000012292 17 0.837 - - - - - 0.837 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
92. DIET1 DIET1 1 0.837 - - - - - 0.837 - - - -
93. OSTN ENSGALG00000007226 33 0.837 - - - - - 0.837 - - - - osteocrin [Source:NCBI gene;Acc:424907]
94. STK35 ENSGALG00000036219 0 0.837 - - - - - 0.837 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
95. LOC100858814 ENSGALG00000028210 3 0.837 - - - - - 0.837 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
96. BACE1 ENSGALG00000007298 3 0.837 - - - - - 0.837 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
97. SLC26A11 ENSGALG00000007018 7 0.837 - - - - - 0.837 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
98. TOX3 ENSGALG00000034649 54 0.837 - - - - - 0.837 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
99. ST7L ENSGALG00000001538 5 0.837 - - - - - 0.837 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
100. TSSK3 4 0.837 - - - - - 0.837 - - - - testis specific serine kinase 3

There are 101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA