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Results for TPM1

Gene Name Gene ID Reads Annotation
TPM1 ENSG00000140416 44382 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]



Genes with expression patterns similar to TPM1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. TPM1 ENSG00000140416 44382 2 1.000 1.000 tropomyosin 1 [Source:HGNC Symbol;Acc:HGNC:12010]
2. SNAI2 ENSG00000019549 22574 1.542 0.774 0.768 snail family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:11094]
3. CXCL12 ENSG00000107562 23857 0.883 0.883 - C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
4. IFITM2 ENSG00000185201 72348 0.86 0.860 - interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
5. GPC6 ENSG00000183098 5564 0.838 0.838 - glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
6. PCOLCE ENSG00000106333 16043 0.826 0.826 - procollagen C-endopeptidase enhancer [Source:HGNC Symbol;Acc:HGNC:8738]
7. PARVA ENSG00000197702 7507 0.82 0.820 - parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
8. FLNB ENSG00000136068 2306 0.81 0.810 - filamin B [Source:HGNC Symbol;Acc:HGNC:3755]
9. CD81 ENSG00000110651 39138 0.809 0.809 - CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]
10. HSPB1 ENSG00000106211 26988 0.808 0.808 - heat shock protein family B (small) member 1 [Source:HGNC Symbol;Acc:HGNC:5246]
11. ADAMTS7 ENSG00000136378 7794 0.807 0.807 - ADAM metallopeptidase with thrombospondin type 1 motif 7 [Source:HGNC Symbol;Acc:HGNC:223]
12. PDGFRA ENSG00000134853 7332 0.791 0.791 - platelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]
13. IFITM3 ENSG00000142089 57239 0.783 0.783 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
14. FAM198B ENSG00000164125 9061 0.78 0.780 - family with sequence similarity 198 member B [Source:HGNC Symbol;Acc:HGNC:25312]
15. CNN2 ENSG00000064666 22298 0.777 0.777 - calponin 2 [Source:HGNC Symbol;Acc:HGNC:2156]
16. HMGA2 ENSG00000149948 86734 0.775 0.775 - high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
17. PHACTR2 ENSG00000112419 13720 0.769 0.769 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
18. MMP2 ENSG00000087245 4593 0.768 0.768 - matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]
19. FZD8 ENSG00000177283 1239 0.767 0.767 - frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]
20. PEG10 ENSG00000242265 45369 0.764 0.764 - paternally expressed 10 [Source:HGNC Symbol;Acc:HGNC:14005]
21. MYH10 ENSG00000133026 19118 0.763 0.763 - myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568]
22. AXL ENSG00000167601 3992 0.762 0.762 - AXL receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:905]
23. FN1 ENSG00000115414 18367 0.759 0.759 - fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]
24. MEIS1 ENSG00000143995 11216 0.758 0.758 - Meis homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7000]
25. EDNRA ENSG00000151617 6209 0.75 0.750 - endothelin receptor type A [Source:HGNC Symbol;Acc:HGNC:3179]
26. MDK ENSG00000110492 213340 0.749 0.749 - midkine [Source:HGNC Symbol;Acc:HGNC:6972]
27. FLNA ENSG00000196924 5359 0.745 0.745 - filamin A [Source:HGNC Symbol;Acc:HGNC:3754]
28. CALD1 ENSG00000122786 14110 0.74 0.740 - caldesmon 1 [Source:HGNC Symbol;Acc:HGNC:1441]
29. PTGIS ENSG00000124212 3432 0.739 0.739 - prostaglandin I2 synthase [Source:HGNC Symbol;Acc:HGNC:9603]
30. PEAR1 ENSG00000187800 3067 0.738 0.738 - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
31. RAB34 ENSG00000109113 8321 0.737 0.737 - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
32. EVA1B ENSG00000142694 5343 0.736 0.736 - eva-1 homolog B [Source:HGNC Symbol;Acc:HGNC:25558]
33. ARMCX2 ENSG00000184867 8129 0.733 0.733 - armadillo repeat containing X-linked 2 [Source:HGNC Symbol;Acc:HGNC:16869]
34. TIMP1 ENSG00000102265 19585 0.73 0.730 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
35. AMOT ENSG00000126016 13416 0.729 0.729 - angiomotin [Source:HGNC Symbol;Acc:HGNC:17810]
36. FZD4 ENSG00000174804 2195 0.727 0.727 - frizzled class receptor 4 [Source:HGNC Symbol;Acc:HGNC:4042]
37. LAMB1 ENSG00000091136 9036 0.726 0.726 - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
38. TWIST2 ENSG00000233608 3167 0.721 0.721 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
39. ANXA6 ENSG00000197043 15243 0.719 0.719 - annexin A6 [Source:HGNC Symbol;Acc:HGNC:544]
40. MAP3K1 ENSG00000095015 8341 0.713 0.713 - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
41. GPC3 ENSG00000147257 34465 0.713 0.713 - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
42. COL5A1 ENSG00000130635 11942 0.712 0.712 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
43. NYNRIN ENSG00000205978 4875 0.712 0.712 - NYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]
44. LPAR1 ENSG00000198121 3173 0.711 0.711 - lysophosphatidic acid receptor 1 [Source:HGNC Symbol;Acc:HGNC:3166]
45. ITGA8 ENSG00000077943 1889 0.709 0.709 - integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
46. SMO ENSG00000128602 4392 0.709 0.709 - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
47. SLC38A2 ENSG00000134294 18805 0.708 0.708 - solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
48. SERPINH1 ENSG00000149257 8264 0.706 0.706 - serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546]
49. FHL2 ENSG00000115641 3164 0.704 0.704 - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
50. ITGB1 ENSG00000150093 34753 0.703 0.703 - integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
51. BNC2 ENSG00000173068 7220 0.7 0.700 - basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA