Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TIMP1

Gene Name Gene ID Reads Annotation
TIMP1 ENSG00000102265 19585 TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]



Genes with expression patterns similar to TIMP1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. TIMP1 ENSG00000102265 19585 2 1.000 1.000 TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
2. IFITM3 ENSG00000142089 57239 1.631 0.923 0.708 interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
3. SPARC ENSG00000113140 39707 1.616 0.876 0.740 secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
4. APOBEC3C ENSG00000244509 3066 1.583 0.759 0.824 apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
5. MYL9 ENSG00000101335 4604 1.561 0.859 0.702 myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
6. GPC3 ENSG00000147257 34465 1.56 0.813 0.747 glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
7. FBXO17 ENSG00000269190, ENSG00000282954 4383 1.553 0.751 0.802 F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
8. CSRP1 ENSG00000159176 5731 1.545 0.786 0.759 cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
9. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 1.521 0.730 0.791 Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
10. MIR503HG ENSG00000223749 600 1.515 0.805 0.710 MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
11. GRN ENSG00000030582 15538 1.505 0.803 0.702 granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
12. CD151 ENSG00000177697 7219 1.439 0.721 0.718 CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
13. COL5A1 ENSG00000130635 11942 0.896 0.896 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
14. PHACTR2 ENSG00000112419 13720 0.891 0.891 - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
15. CXCL12 ENSG00000107562 23857 0.876 0.876 - C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]
16. SNAI2 ENSG00000019549 22574 0.874 0.874 - snail family transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:11094]
17. MYH9 ENSG00000100345 12447 0.874 0.874 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
18. COL1A2 ENSG00000164692 43340 0.865 0.865 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
19. NFIB ENSG00000147862 8306 0.863 0.863 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
20. COL1A1 ENSG00000108821 71290 0.854 0.854 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
21. FHL2 ENSG00000115641 3164 0.845 0.845 - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
22. PDGFRB ENSG00000113721 2455 0.844 0.844 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
23. FNDC3B ENSG00000075420 3523 0.836 0.836 - fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:HGNC:24670]
24. SPINT2 ENSG00000167642 25745 0.833 0.833 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
25. RBPMS ENSG00000157110 10094 0.828 0.828 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
26. PVRL2 PVRL2 2781 0.826 0.826 -
27. HAND2 ENSG00000164107 5416 0.824 0.824 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
28. TEAD3 ENSG00000007866 2898 0.823 0.823 - TEA domain transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11716]
29. ITM2C ENSG00000135916 51525 0.823 0.823 - integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
30. SERPINH1 ENSG00000149257 8264 0.821 0.821 - serpin family H member 1 [Source:HGNC Symbol;Acc:HGNC:1546]
31. KCTD12 ENSG00000178695 23035 0.817 0.817 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
32. PXDN ENSG00000130508 44183 0.81 0.810 - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
33. RBMS1 ENSG00000153250 11118 0.808 0.808 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
34. FREM2 ENSG00000150893 3376 0.807 0.807 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
35. NFIC ENSG00000141905 3106 0.807 0.807 - nuclear factor I C [Source:HGNC Symbol;Acc:HGNC:7786]
36. AHNAK ENSG00000124942 11800 0.806 0.806 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
37. WT1 ENSG00000184937 5369 0.806 0.806 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
38. COL3A1 ENSG00000168542 140021 0.804 0.804 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
39. KRT19 ENSG00000171345 1700 0.803 0.803 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
40. COL6A1 ENSG00000142156 20649 0.803 0.803 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
41. S100A11 ENSG00000163191 11475 0.802 0.802 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
42. MMP11 ENSG00000099953, ENSG00000275365 2049 0.801 0.801 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
43. DSP ENSG00000096696 5097 0.801 0.801 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
44. COL6A2 ENSG00000142173 2550 0.798 0.798 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
45. MXRA8 ENSG00000162576 6851 0.794 0.794 - matrix remodeling associated 8 [Source:HGNC Symbol;Acc:HGNC:7542]
46. STAT6 ENSG00000166888 2411 0.788 0.788 - signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]
47. MAGI2-AS3 ENSG00000234456 5066 0.786 0.786 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
48. LEPROT ENSG00000213625 6185 0.786 0.786 - leptin receptor overlapping transcript [Source:HGNC Symbol;Acc:HGNC:29477]
49. SMAD6 ENSG00000137834 805 0.785 0.785 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
50. RFTN1 ENSG00000131378 3531 0.785 0.785 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
51. SLC9A3R1 ENSG00000109062 4036 0.784 0.784 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
52. EFNB1 ENSG00000090776 2908 0.781 0.781 - ephrin B1 [Source:HGNC Symbol;Acc:HGNC:3226]
53. FLRT3 ENSG00000125848 10097 0.78 0.780 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
54. FOS ENSG00000170345 1363 0.78 0.780 - Fos proto-oncogene, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3796]
55. ATP2B4 ENSG00000058668 5432 0.78 0.780 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
56. CTGF ENSG00000118523 4166 0.779 0.779 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
57. TWIST2 ENSG00000233608 3167 0.778 0.778 - twist family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:20670]
58. MAP3K1 ENSG00000095015 8341 0.778 0.778 - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
59. KLK6 ENSG00000167755 1069 0.778 0.778 - kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
60. TRABD2B ENSG00000269113 1426 0.773 0.773 - TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
61. RHOBTB3 ENSG00000164292 20064 0.773 0.773 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
62. CYGB ENSG00000161544 1373 0.769 0.769 - cytoglobin [Source:HGNC Symbol;Acc:HGNC:16505]
63. PLAGL1 ENSG00000118495 6344 0.768 0.768 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
64. CDH9 ENSG00000113100 257 0.767 0.767 - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
65. FZD4 ENSG00000174804 2195 0.767 0.767 - frizzled class receptor 4 [Source:HGNC Symbol;Acc:HGNC:4042]
66. GNG12 ENSG00000172380 3600 0.765 0.765 - G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]
67. TSHZ2 ENSG00000182463 10473 0.764 0.764 - teashirt zinc finger homeobox 2 [Source:HGNC Symbol;Acc:HGNC:13010]
68. LAMC1 ENSG00000135862 20353 0.763 0.763 - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
69. CRISPLD2 ENSG00000103196 2911 0.761 0.761 - cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]
70. HSPB1 ENSG00000106211 26988 0.761 0.761 - heat shock protein family B (small) member 1 [Source:HGNC Symbol;Acc:HGNC:5246]
71. PITX1 ENSG00000069011 817 0.759 0.759 - paired like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]
72. SFRP1 ENSG00000104332 280077 0.759 0.759 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
73. CTSB ENSG00000164733 7440 0.758 0.758 - cathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]
74. PEG3 ENSG00000198300 11207 0.758 0.758 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
75. NFATC2 ENSG00000101096 898 0.757 0.757 - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
76. ITGB1 ENSG00000150093 34753 0.757 0.757 - integrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
77. CD59 ENSG00000085063 5557 0.757 0.757 - CD59 molecule (CD59 blood group) [Source:HGNC Symbol;Acc:HGNC:1689]
78. UNC5B ENSG00000107731 3573 0.757 0.757 - unc-5 netrin receptor B [Source:HGNC Symbol;Acc:HGNC:12568]
79. CD164 ENSG00000135535 8737 0.755 0.755 - CD164 molecule [Source:HGNC Symbol;Acc:HGNC:1632]
80. CTDSP2 ENSG00000175215 12159 0.754 0.754 - CTD small phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:17077]
81. KRT8 ENSG00000170421 12050 0.754 0.754 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
82. PEAR1 ENSG00000187800 3067 0.753 0.753 - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
83. WASF2 ENSG00000158195 11361 0.753 0.753 - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
84. CDH3 ENSG00000062038 5449 0.753 0.753 - cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
85. GUCY1B3 1302 0.752 0.752 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
86. GATA6 ENSG00000141448 3614 0.751 0.751 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
87. BST2 ENSG00000130303 1588 0.75 0.750 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
88. LASP1 ENSG00000002834 16618 0.75 - 0.750 LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:HGNC:6513]
89. CREB3L1 ENSG00000157613 755 0.749 0.749 - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
90. ADAMTS9 ENSG00000163638 2110 0.749 0.749 - ADAM metallopeptidase with thrombospondin type 1 motif 9 [Source:HGNC Symbol;Acc:HGNC:13202]
91. CUX1 ENSG00000257923 10777 0.748 0.748 - cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]
92. DMKN ENSG00000161249 3603 0.747 0.747 - dermokine [Source:HGNC Symbol;Acc:HGNC:25063]
93. LAMA5 ENSG00000130702 4073 0.745 0.745 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
94. ITM2B ENSG00000136156 52463 0.744 0.744 - integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
95. EVA1B ENSG00000142694 5343 0.743 0.743 - eva-1 homolog B [Source:HGNC Symbol;Acc:HGNC:25558]
96. KIF1C ENSG00000129250 4353 0.743 0.743 - kinesin family member 1C [Source:HGNC Symbol;Acc:HGNC:6317]
97. KRT18 ENSG00000111057 1738 0.742 0.742 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
98. ARMCX2 ENSG00000184867 8129 0.742 0.742 - armadillo repeat containing X-linked 2 [Source:HGNC Symbol;Acc:HGNC:16869]
99. SERINC5 ENSG00000164300 3838 0.742 0.742 - serine incorporator 5 [Source:HGNC Symbol;Acc:HGNC:18825]
100. ADD3 ENSG00000148700 7732 0.742 0.742 - adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA