Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCN3B

Gene Name Gene ID Reads Annotation
SCN3B ENSG00000166257 491 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]



Genes with expression patterns similar to SCN3B

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SCN3B ENSG00000166257 491 2 1.000 1.000 sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
2. SV2C ENSG00000122012 837 1.709 0.816 0.893 synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
3. NEFL ENSG00000277586 6204 1.665 0.776 0.889 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
4. MAPT ENSG00000186868, ENSG00000276155, ENSG00000277956 1829 1.648 0.785 0.863 microtubule associated protein tau [Source:HGNC Symbol;Acc:HGNC:6893]
5. MYT1 ENSG00000196132, ENSG00000276876 1089 1.643 0.781 0.862 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
6. RTN1 ENSG00000139970 4545 1.635 0.774 0.861 reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]
7. CDK5R1 ENSG00000176749 4151 1.616 0.781 0.835 cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]
8. INA ENSG00000148798 12811 1.597 0.756 0.841 internexin neuronal intermediate filament protein alpha [Source:HGNC Symbol;Acc:HGNC:6057]
9. PDLIM1 ENSG00000107438 11977 1.592 0.759 0.833 PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
10. NEFM ENSG00000104722 6565 1.591 0.761 0.830 neurofilament medium [Source:HGNC Symbol;Acc:HGNC:7734]
11. STMN2 ENSG00000104435 16286 1.589 0.782 0.807 stathmin 2 [Source:HGNC Symbol;Acc:HGNC:10577]
12. L1CAM ENSG00000198910 1652 1.587 0.815 0.772 L1 cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:6470]
13. SST ENSG00000157005 12887 1.586 0.771 0.815 somatostatin [Source:HGNC Symbol;Acc:HGNC:11329]
14. GNAO1 ENSG00000087258 567 1.57 0.723 0.847 G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]
15. GAP43 ENSG00000172020 9990 1.568 0.759 0.809 growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]
16. DCX ENSG00000077279 9569 1.566 0.780 0.786 doublecortin [Source:HGNC Symbol;Acc:HGNC:2714]
17. KLC1 ENSG00000126214 6387 1.557 0.739 0.818 kinesin light chain 1 [Source:HGNC Symbol;Acc:HGNC:6387]
18. SCN3A ENSG00000153253 621 1.53 0.735 0.795 sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
19. MLLT11 ENSG00000213190 18099 1.523 0.775 0.748 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
20. TUBB2A ENSG00000137267 4508 1.52 0.743 0.777 tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412]
21. MAPRE2 ENSG00000166974 5413 1.506 0.711 0.795 microtubule associated protein RP/EB family member 2 [Source:HGNC Symbol;Acc:HGNC:6891]
22. ELAVL2 ENSG00000107105 5067 1.497 0.773 0.724 ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
23. ENO2 ENSG00000111674 2931 1.493 0.759 0.734 enolase 2 [Source:HGNC Symbol;Acc:HGNC:3353]
24. GDAP1L1 ENSG00000124194 1388 1.487 0.750 0.737 ganglioside induced differentiation associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:4213]
25. PGM2L1 ENSG00000165434 4182 1.482 0.704 0.778 phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
26. OLIG2 ENSG00000205927 533 1.45 0.734 0.716 oligodendrocyte transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]
27. LOC101929563 1404 1.443 0.742 0.701 uncharacterized LOC101929563
28. TUBB3 ENSG00000258947 53998 1.438 0.723 0.715 tubulin beta 3 class III [Source:HGNC Symbol;Acc:HGNC:20772]
29. ELAVL3 ENSG00000196361 2164 1.431 0.722 0.709 ELAV like RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3314]
30. STMN4 ENSG00000015592 748 1.426 0.722 0.704 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
31. KIF1A ENSG00000130294 2920 1.423 0.720 0.703 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
32. OLIG1 ENSG00000184221 511 1.414 0.704 0.710 oligodendrocyte transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16983]
33. PHF21B ENSG00000056487 2704 1.413 0.703 0.710 PHD finger protein 21B [Source:HGNC Symbol;Acc:HGNC:25161]
34. BASP1 ENSG00000176788 18176 1.412 0.708 0.704 brain abundant membrane attached signal protein 1 [Source:HGNC Symbol;Acc:HGNC:957]
35. CCDC184 ENSG00000177875 785 0.903 - 0.903 coiled-coil domain containing 184 [Source:HGNC Symbol;Acc:HGNC:33749]
36. CDK5R2 ENSG00000171450 62 0.87 - 0.870 cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]
37. ATP1A3 ENSG00000105409 428 0.869 - 0.869 ATPase Na+/K+ transporting subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:801]
38. ISLR2 ENSG00000167178 161 0.869 - 0.869 immunoglobulin superfamily containing leucine rich repeat 2 [Source:HGNC Symbol;Acc:HGNC:29286]
39. RET ENSG00000165731 339 0.854 - 0.854 ret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]
40. UTS2B ENSG00000188958 280 0.853 0.853 - urotensin 2B [Source:HGNC Symbol;Acc:HGNC:30894]
41. PAK7 348 0.852 0.852 - p21 (RAC1) activated kinase 7, transcript variant X6
42. ARHGAP36 ENSG00000147256 614 0.848 - 0.848 Rho GTPase activating protein 36 [Source:HGNC Symbol;Acc:HGNC:26388]
43. RBFOX1 ENSG00000078328 852 0.846 - 0.846 RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
44. JPH3 ENSG00000154118 420 0.845 - 0.845 junctophilin 3 [Source:HGNC Symbol;Acc:HGNC:14203]
45. DUSP8 ENSG00000184545, ENSG00000273793, ENSG00000278165 213 0.838 - 0.838 dual specificity phosphatase 8 [Source:HGNC Symbol;Acc:HGNC:3074]
46. KIF5C ENSG00000168280, ENSG00000276734 1294 0.838 - 0.838 kinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]
47. AKAP6 ENSG00000151320 580 0.827 - 0.827 A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
48. NELL1 ENSG00000165973 2345 0.825 - 0.825 neural EGFL like 1 [Source:HGNC Symbol;Acc:HGNC:7750]
49. Mar-04 Mar-04 149 0.819 - 0.819
50. RAB6B ENSG00000154917 1104 0.814 - 0.814 RAB6B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14902]
51. LINC00957 ENSG00000235314 72 0.806 - 0.806 long intergenic non-protein coding RNA 957 [Source:HGNC Symbol;Acc:HGNC:22332]
52. AMER2 ENSG00000165566 317 0.805 - 0.805 APC membrane recruitment protein 2 [Source:HGNC Symbol;Acc:HGNC:26360]
53. LHX3 ENSG00000107187 507 0.804 0.804 - LIM homeobox 3 [Source:HGNC Symbol;Acc:HGNC:6595]
54. SNAP25 ENSG00000132639 1533 0.799 - 0.799 synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]
55. UBE2QL1 ENSG00000215218 1320 0.795 - 0.795 ubiquitin conjugating enzyme E2 Q family like 1 [Source:HGNC Symbol;Acc:HGNC:37269]
56. EPB41L1 ENSG00000088367 2310 0.793 - 0.793 erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
57. RUNDC3A ENSG00000108309 522 0.791 - 0.791 RUN domain containing 3A [Source:HGNC Symbol;Acc:HGNC:16984]
58. AP3B2 ENSG00000103723 307 0.787 - 0.787 adaptor related protein complex 3 subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:567]
59. IRX6 ENSG00000159387 238 0.784 - 0.784 iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
60. ISL2 ENSG00000159556 593 0.783 0.783 - ISL LIM homeobox 2 [Source:HGNC Symbol;Acc:HGNC:18524]
61. SYT4 ENSG00000132872 928 0.781 - 0.781 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
62. SPRN ENSG00000203772 33 0.78 - 0.780 shadow of prion protein [Source:HGNC Symbol;Acc:HGNC:16871]
63. RUFY3 ENSG00000018189 4536 0.779 - 0.779 RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
64. HMP19 643 0.776 - 0.776 HMP19 protein
65. ECEL1 ENSG00000171551 286 0.774 - 0.774 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
66. LMO1 ENSG00000166407 258 0.768 - 0.768 LIM domain only 1 [Source:HGNC Symbol;Acc:HGNC:6641]
67. SLC18A3 ENSG00000187714 4213 0.768 0.768 - solute carrier family 18 member A3 [Source:HGNC Symbol;Acc:HGNC:10936]
68. SYP ENSG00000102003 170 0.766 - 0.766 synaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]
69. SRCIN1 ENSG00000273608, ENSG00000277363 177 0.764 - 0.764 SRC kinase signaling inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:29506]
70. DNER ENSG00000187957 2971 0.761 - 0.761 delta/notch like EGF repeat containing [Source:HGNC Symbol;Acc:HGNC:24456]
71. ISL1 ENSG00000016082 4314 0.761 0.761 - ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:HGNC:6132]
72. CADPS ENSG00000163618 1353 0.758 0.758 - calcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]
73. SEZ6L2 ENSG00000174938 1533 0.757 - 0.757 seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]
74. CHRNA4 ENSG00000101204 750 0.756 - 0.756 cholinergic receptor nicotinic alpha 4 subunit [Source:HGNC Symbol;Acc:HGNC:1958]
75. CTXN3 ENSG00000205279 84 0.754 0.754 - cortexin 3 [Source:HGNC Symbol;Acc:HGNC:31110]
76. PHACTR3 ENSG00000087495 749 0.752 - 0.752 phosphatase and actin regulator 3 [Source:HGNC Symbol;Acc:HGNC:15833]
77. BLACAT1 ENSG00000281406 57 0.752 - 0.752 bladder cancer associated transcript 1 [Source:HGNC Symbol;Acc:HGNC:48597]
78. CAMK2N1 ENSG00000162545 10727 0.752 - 0.752 calcium/calmodulin dependent protein kinase II inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:24190]
79. GRIA1 ENSG00000155511 273 0.751 - 0.751 glutamate ionotropic receptor AMPA type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4571]
80. TRIM36 ENSG00000152503 452 0.749 - 0.749 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
81. SLC8A2 ENSG00000118160 66 0.748 0.748 - solute carrier family 8 member A2 [Source:HGNC Symbol;Acc:HGNC:11069]
82. NKAIN3 ENSG00000185942 2284 0.748 0.748 - sodium/potassium transporting ATPase interacting 3 [Source:HGNC Symbol;Acc:HGNC:26829]
83. SCG3 ENSG00000104112 681 0.747 0.747 - secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]
84. GLRA2 ENSG00000101958 149 0.745 - 0.745 glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
85. EPS8L1 ENSG00000131037 124 0.744 - 0.744 EPS8 like 1 [Source:HGNC Symbol;Acc:HGNC:21295]
86. SYT1 ENSG00000067715 4379 0.744 - 0.744 synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]
87. SMPD3 ENSG00000103056 241 0.744 0.744 - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
88. RUNDC3B ENSG00000105784 261 0.742 - 0.742 RUN domain containing 3B [Source:HGNC Symbol;Acc:HGNC:30286]
89. AKR1C2 ENSG00000151632 457 0.74 0.740 - aldo-keto reductase family 1 member C2 [Source:HGNC Symbol;Acc:HGNC:385]
90. REEP1 ENSG00000068615 2132 0.738 - 0.738 receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
91. ST6GALNAC5 ENSG00000117069 555 0.738 0.738 - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:19342]
92. UNC79 ENSG00000133958, ENSG00000276416 151 0.737 - 0.737 unc-79 homolog, NALCN channel complex subunit [Source:HGNC Symbol;Acc:HGNC:19966]
93. DLGAP2 ENSG00000198010, ENSG00000274161, ENSG00000282103, ENSG00000282152, ENSG00000282318 213 0.737 0.737 - DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
94. RBFOX3 ENSG00000167281 329 0.735 0.735 - RNA binding fox-1 homolog 3 [Source:HGNC Symbol;Acc:HGNC:27097]
95. RLTPR RLTPR 11 0.735 - 0.735
96. GRIK3 ENSG00000163873 146 0.732 0.732 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
97. CYFIP2 ENSG00000055163 1163 0.73 - 0.730 cytoplasmic FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:13760]
98. MAP2 ENSG00000078018 3573 0.728 - 0.728 microtubule associated protein 2 [Source:HGNC Symbol;Acc:HGNC:6839]
99. YWHAZ ENSG00000164924 56105 0.727 0.727 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
100. NYAP1 ENSG00000166924 47 0.726 - 0.726 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 [Source:HGNC Symbol;Acc:HGNC:22009]

There are 34 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA