Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIF1

Gene Name Gene ID Reads Annotation
RIF1 ENSG00000080345 7757 replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]



Genes with expression patterns similar to RIF1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RIF1 ENSG00000080345 7757 2 1.000 1.000 replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
2. NUP50 ENSG00000093000 9939 0.822 - 0.822 nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]
3. YTHDF3 ENSG00000185728 6048 0.809 - 0.809 YTH N6-methyladenosine RNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:26465]
4. SMC2 ENSG00000136824 5127 0.802 - 0.802 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]
5. ARID2 ENSG00000189079 7763 0.795 - 0.795 AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
6. DCP2 ENSG00000172795 5680 0.789 - 0.789 decapping mRNA 2 [Source:HGNC Symbol;Acc:HGNC:24452]
7. ZNF292 ENSG00000188994 11216 0.788 - 0.788 zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]
8. FBXO30 ENSG00000118496 5755 0.785 - 0.785 F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
9. MATR3 ENSG00000015479, ENSG00000280987 35194 0.784 - 0.784 matrin 3 [Source:NCBI gene;Acc:9782]
10. ENAH ENSG00000154380 34591 0.783 - 0.783 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
11. SYNCRIP ENSG00000135316 27558 0.779 - 0.779 synaptotagmin binding cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:HGNC:16918]
12. KIF5B ENSG00000170759 16732 0.779 - 0.779 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
13. WDFY1 ENSG00000085449 3401 0.777 - 0.777 WD repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20451]
14. DICER1 ENSG00000100697 6501 0.771 - 0.771 dicer 1, ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17098]
15. ZNF281 ENSG00000162702 5443 0.765 - 0.765 zinc finger protein 281 [Source:HGNC Symbol;Acc:HGNC:13075]
16. SMC4 ENSG00000113810 14567 0.764 - 0.764 structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
17. STAG2 ENSG00000101972 5606 0.762 - 0.762 stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
18. RB1CC1 ENSG00000023287 3626 0.761 - 0.761 RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
19. TROVE2 ENSG00000116747 5903 0.759 - 0.759 TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
20. HSP90AA1 ENSG00000080824 45716 0.758 - 0.758 heat shock protein 90 alpha family class A member 1 [Source:HGNC Symbol;Acc:HGNC:5253]
21. SUZ12 ENSG00000178691 6660 0.758 - 0.758 SUZ12, polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:17101]
22. NIPBL ENSG00000164190 4262 0.754 - 0.754 NIPBL, cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]
23. KIAA1524 1371 0.754 - 0.754 KIAA1524, transcript variant X4
24. RAD21 ENSG00000164754 25784 0.753 - 0.753 RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]
25. LARP4 ENSG00000161813 3066 0.752 - 0.752 La ribonucleoprotein domain family member 4 [Source:HGNC Symbol;Acc:HGNC:24320]
26. ZNF268 ENSG00000090612 2007 0.75 - 0.750 zinc finger protein 268 [Source:HGNC Symbol;Acc:HGNC:13061]
27. KPNA3 ENSG00000102753 4370 0.749 - 0.749 karyopherin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6396]
28. ZNF148 ENSG00000163848 2766 0.747 - 0.747 zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
29. ZNF708 ENSG00000182141 2284 0.747 - 0.747 zinc finger protein 708 [Source:HGNC Symbol;Acc:HGNC:12945]
30. HDAC2 ENSG00000196591 39313 0.747 - 0.747 histone deacetylase 2 [Source:HGNC Symbol;Acc:HGNC:4853]
31. OSBPL8 ENSG00000091039 3510 0.747 - 0.747 oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
32. SOCS6 ENSG00000170677 2759 0.745 - 0.745 suppressor of cytokine signaling 6 [Source:HGNC Symbol;Acc:HGNC:16833]
33. RAD50 ENSG00000113522 3743 0.745 - 0.745 RAD50 double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
34. PRPF40A ENSG00000196504 9481 0.744 - 0.744 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
35. EXOC5 ENSG00000070367 4895 0.744 - 0.744 exocyst complex component 5 [Source:HGNC Symbol;Acc:HGNC:10696]
36. MTF2 ENSG00000143033 11940 0.743 - 0.743 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]
37. MBNL1 ENSG00000152601 2750 0.743 - 0.743 muscleblind like splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:6923]
38. KBTBD7 ENSG00000120696 992 0.742 - 0.742 kelch repeat and BTB domain containing 7 [Source:HGNC Symbol;Acc:HGNC:25266]
39. CWF19L2 ENSG00000152404 6226 0.742 - 0.742 CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
40. EIF1AX ENSG00000173674 24992 0.741 - 0.741 eukaryotic translation initiation factor 1A X-linked [Source:HGNC Symbol;Acc:HGNC:3250]
41. PPIP5K2 ENSG00000145725 4821 0.74 - 0.740 diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
42. PTPN12 ENSG00000127947 7897 0.738 - 0.738 protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]
43. RSBN1 ENSG00000081019 5051 0.737 - 0.737 round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
44. PDS5B ENSG00000083642 3994 0.737 - 0.737 PDS5 cohesin associated factor B [Source:HGNC Symbol;Acc:HGNC:20418]
45. NUDT21 ENSG00000167005 13881 0.735 - 0.735 nudix hydrolase 21 [Source:HGNC Symbol;Acc:HGNC:13870]
46. STT3B ENSG00000163527 8014 0.732 - 0.732 STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:HGNC Symbol;Acc:HGNC:30611]
47. SESN3 ENSG00000149212 4524 0.731 - 0.731 sestrin 3 [Source:HGNC Symbol;Acc:HGNC:23060]
48. PHIP ENSG00000146247 9731 0.731 - 0.731 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
49. KLHL9 ENSG00000198642 4699 0.731 - 0.731 kelch like family member 9 [Source:HGNC Symbol;Acc:HGNC:18732]
50. ANKRD26 ENSG00000107890 2534 0.728 - 0.728 ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:HGNC:29186]
51. ERBB2IP ERBB2IP 3327 0.727 - 0.727
52. ATAD2B ENSG00000119778 1798 0.727 - 0.727 ATPase family, AAA domain containing 2B [Source:HGNC Symbol;Acc:HGNC:29230]
53. AKAP9 ENSG00000127914 5166 0.727 - 0.727 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
54. SREK1IP1 ENSG00000153006 5833 0.726 - 0.726 SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]
55. MED13L ENSG00000123066 3218 0.724 - 0.724 mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
56. USP47 ENSG00000170242 5618 0.724 - 0.724 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:HGNC:20076]
57. ROCK1 ENSG00000067900 3375 0.721 - 0.721 Rho associated coiled-coil containing protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:10251]
58. TMTC3 ENSG00000139324 2355 0.721 - 0.721 transmembrane and tetratricopeptide repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:26899]
59. UBE3A ENSG00000114062 9252 0.72 - 0.720 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
60. CMTR2 ENSG00000180917, ENSG00000282945 1028 0.719 - 0.719 cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
61. CHD1 ENSG00000153922 3592 0.718 - 0.718 chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1915]
62. ZDHHC20 ENSG00000180776 3062 0.717 - 0.717 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
63. GALNT1 ENSG00000141429 4702 0.716 - 0.716 polypeptide N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4123]
64. ZBTB44 ENSG00000196323 6946 0.716 - 0.716 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
65. CDK1 ENSG00000170312 16931 0.716 - 0.716 cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]
66. ZMYM2 ENSG00000121741 4271 0.715 - 0.715 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
67. SMAD5 ENSG00000113658 5641 0.713 - 0.713 SMAD family member 5 [Source:HGNC Symbol;Acc:HGNC:6771]
68. USP16 ENSG00000156256 3161 0.713 - 0.713 ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
69. CCAR1 ENSG00000060339 27115 0.712 - 0.712 cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
70. MORF4L1 ENSG00000185787 87871 0.712 - 0.712 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
71. ZC3H15 ENSG00000065548 7991 0.71 - 0.710 zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:HGNC:29528]
72. ATRX ENSG00000085224 27422 0.709 - 0.709 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
73. CENPE ENSG00000138778 4793 0.708 - 0.708 centromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]
74. ASPM ENSG00000066279 7430 0.708 - 0.708 abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
75. SMARCA5 ENSG00000153147 11058 0.708 - 0.708 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
76. CTNNB1 ENSG00000168036 16377 0.708 - 0.708 catenin beta 1 [Source:HGNC Symbol;Acc:HGNC:2514]
77. TBL1XR1 ENSG00000177565 10246 0.706 - 0.706 transducin beta like 1 X-linked receptor 1 [Source:HGNC Symbol;Acc:HGNC:29529]
78. PPP1CB ENSG00000213639 14737 0.706 - 0.706 protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]
79. NAA50 ENSG00000121579 7881 0.705 - 0.705 N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:HGNC Symbol;Acc:HGNC:29533]
80. CEP350 ENSG00000135837 5480 0.704 - 0.704 centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
81. MBNL2 ENSG00000139793 3212 0.703 - 0.703 muscleblind like splicing regulator 2 [Source:HGNC Symbol;Acc:HGNC:16746]
82. TRIM13 ENSG00000204977 7252 0.702 - 0.702 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
83. MORC3 ENSG00000159256 1619 0.702 - 0.702 MORC family CW-type zinc finger 3 [Source:HGNC Symbol;Acc:HGNC:23572]
84. CEBPZ ENSG00000115816 4024 0.702 - 0.702 CCAAT enhancer binding protein zeta [Source:HGNC Symbol;Acc:HGNC:24218]
85. SLC5A3 ENSG00000198743 5045 0.701 - 0.701 solute carrier family 5 member 3 [Source:HGNC Symbol;Acc:HGNC:11038]
86. TRIP12 ENSG00000153827 10285 0.701 - 0.701 thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
87. IMPA1 ENSG00000133731 2531 0.7 - 0.700 inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
88. MED13 ENSG00000108510 4518 0.7 - 0.700 mediator complex subunit 13 [Source:HGNC Symbol;Acc:HGNC:22474]
89. NSA2 ENSG00000164346 9129 0.7 - 0.700 NSA2, ribosome biogenesis homolog [Source:HGNC Symbol;Acc:HGNC:30728]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA