Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01016

Gene Name Gene ID Reads Annotation
LINC01016 ENSG00000249346 3 long intergenic non-protein coding RNA 1016 [Source:HGNC Symbol;Acc:HGNC:48991]



Genes with expression patterns similar to LINC01016

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01016 ENSG00000249346 3 2 1.000 1.000 long intergenic non-protein coding RNA 1016 [Source:HGNC Symbol;Acc:HGNC:48991]
2. MAPT-IT1 ENSG00000279685, ENSG00000281284, ENSG00000282620 12 1.762 1.000 0.762 MAPT intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43741]
3. MLXIPL ENSG00000009950 11 1.74 1.000 0.740 MLX interacting protein like [Source:HGNC Symbol;Acc:HGNC:12744]
4. MRGPRF ENSG00000172935 68 1.435 0.715 0.720 MAS related GPR family member F [Source:HGNC Symbol;Acc:HGNC:24828]
5. LINC00941 ENSG00000235884, ENSG00000285517 3 1 1.000 - long intergenic non-protein coding RNA 941 [Source:NCBI gene;Acc:100287314]
6. PILRB ENSG00000121716 4 1 1.000 - paired immunoglobin-like type 2 receptor beta [Source:HGNC Symbol;Acc:HGNC:18297]
7. MIR3976HG ENSG00000261738 2 1 1.000 - MIR3976 host gene [Source:HGNC Symbol;Acc:HGNC:51104]
8. GPRC5D ENSG00000111291 2 1 1.000 - G protein-coupled receptor class C group 5 member D [Source:HGNC Symbol;Acc:HGNC:13310]
9. DLGAP3 ENSG00000116544 9 1 1.000 - DLG associated protein 3 [Source:HGNC Symbol;Acc:HGNC:30368]
10. SLAMF8 ENSG00000158714 2 1 1.000 - SLAM family member 8 [Source:HGNC Symbol;Acc:HGNC:21391]
11. CD19 ENSG00000177455 22 1 1.000 - CD19 molecule [Source:HGNC Symbol;Acc:HGNC:1633]
12. PI4KAP1 ENSG00000274602 4 1 1.000 - phosphatidylinositol 4-kinase alpha pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33576]
13. LINC00269 ENSG00000215162 3 1 1.000 - long intergenic non-protein coding RNA 269 [Source:HGNC Symbol;Acc:HGNC:26586]
14. AMTN ENSG00000187689 4 1 1.000 - amelotin [Source:HGNC Symbol;Acc:HGNC:33188]
15. HIST1H2BO ENSG00000274641 9 1 1.000 - histone cluster 1 H2B family member o [Source:HGNC Symbol;Acc:HGNC:4758]
16. C2CD4D ENSG00000225556 2 1 1.000 - C2 calcium dependent domain containing 4D [Source:HGNC Symbol;Acc:HGNC:37210]
17. GALNT5 ENSG00000136542 5 1 1.000 - polypeptide N-acetylgalactosaminyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4127]
18. RSPH6A ENSG00000104941 2 1 1.000 - radial spoke head 6 homolog A [Source:HGNC Symbol;Acc:HGNC:14241]
19. LINC01304 ENSG00000237401 2 1 1.000 - long intergenic non-protein coding RNA 1304 [Source:HGNC Symbol;Acc:HGNC:50472]
20. LOC100507073 2 1 1.000 - uncharacterized LOC100507073
21. OTC ENSG00000036473 13 1 1.000 - ornithine carbamoyltransferase [Source:HGNC Symbol;Acc:HGNC:8512]
22. MIR202HG ENSG00000166917 6 1 1.000 - MIR202 host gene [Source:HGNC Symbol;Acc:HGNC:49402]
23. LOC100506076 2 1 1.000 - uncharacterized LOC100506076, transcript variant 1
24. TTC23L ENSG00000205838 2 1 1.000 - tetratricopeptide repeat domain 23 like [Source:HGNC Symbol;Acc:HGNC:26355]
25. SMN1 ENSG00000172062, ENSG00000275349 4 1 1.000 - survival of motor neuron 1, telomeric [Source:HGNC Symbol;Acc:HGNC:11117]
26. ANKRD36BP2 ENSG00000230006 4 1 1.000 - ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]
27. LOC153684 5 1 1.000 - uncharacterized LOC153684
28. ELANE ENSG00000197561, ENSG00000277571 2 1 1.000 - elastase, neutrophil expressed [Source:HGNC Symbol;Acc:HGNC:3309]
29. CRH ENSG00000147571 2 1 1.000 - corticotropin releasing hormone [Source:HGNC Symbol;Acc:HGNC:2355]
30. CYP4Z1 ENSG00000186160 9 0.971 0.971 - cytochrome P450 family 4 subfamily Z member 1 [Source:HGNC Symbol;Acc:HGNC:20583]
31. CCL1 ENSG00000108702 1 0.951 - 0.951 C-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:10609]
32. PVRIG ENSG00000213413 7 0.941 0.941 - PVR related immunoglobulin domain containing [Source:HGNC Symbol;Acc:HGNC:32190]
33. CST5 ENSG00000170367 7 0.922 - 0.922 cystatin D [Source:HGNC Symbol;Acc:HGNC:2477]
34. LINC01229 ENSG00000260876 6 0.913 0.913 - long intergenic non-protein coding RNA 1229 [Source:HGNC Symbol;Acc:HGNC:49682]
35. PRTN3 ENSG00000196415, ENSG00000277804 24 0.906 0.906 - proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]
36. AQP3 ENSG00000165272 137 0.903 - 0.903 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
37. NPHS1 ENSG00000161270 1427 0.89 - 0.890 NPHS1, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]
38. ADGRG5 ENSG00000159618 23 0.887 0.887 - adhesion G protein-coupled receptor G5 [Source:HGNC Symbol;Acc:HGNC:19010]
39. AADACL4 ENSG00000204518 5 0.881 - 0.881 arylacetamide deacetylase like 4 [Source:HGNC Symbol;Acc:HGNC:32038]
40. DMRT1 ENSG00000137090 16 0.88 0.880 - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
41. SPOCK2 ENSG00000107742 3481 0.879 - 0.879 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:13564]
42. NPHS2 ENSG00000116218 6339 0.865 - 0.865 NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
43. INTS4P2 ENSG00000273024 5 0.86 0.860 - integrator complex subunit 4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:22351]
44. PTPRO ENSG00000151490 826 0.858 - 0.858 protein tyrosine phosphatase, receptor type O [Source:HGNC Symbol;Acc:HGNC:9678]
45. AQP7 ENSG00000165269 51 0.857 - 0.857 aquaporin 7 [Source:HGNC Symbol;Acc:HGNC:640]
46. GADD45A ENSG00000116717 1743 0.855 - 0.855 growth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]
47. FAM65A 3785 0.85 - 0.850 family with sequence similarity 65 member A, transcript variant X7
48. ST6GALNAC2 ENSG00000070731 59 0.845 - 0.845 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10867]
49. PLEK2 ENSG00000100558 40 0.84 0.840 - pleckstrin 2 [Source:HGNC Symbol;Acc:HGNC:19238]
50. KLK7 ENSG00000169035 20 0.84 - 0.840 kallikrein related peptidase 7 [Source:HGNC Symbol;Acc:HGNC:6368]
51. CLIC5 ENSG00000112782 1596 0.829 - 0.829 chloride intracellular channel 5 [Source:HGNC Symbol;Acc:HGNC:13517]
52. FA2H ENSG00000103089 28 0.822 - 0.822 fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
53. LRIT2 ENSG00000204033 6 0.821 0.821 - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
54. SLC48A1 ENSG00000211584 2891 0.818 - 0.818 solute carrier family 48 member 1 [Source:HGNC Symbol;Acc:HGNC:26035]
55. C1orf204 18 0.816 0.816 - chromosome 1 open reading frame 204
56. FLJ38576 ENSG00000279943 11 0.814 0.814 - uncharacterized LOC651430 [Source:NCBI gene;Acc:651430]
57. ITGA3 ENSG00000005884 402 0.81 - 0.810 integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
58. SPATA41 ENSG00000189419 21 0.804 0.804 - spermatogenesis associated 41 [Source:HGNC Symbol;Acc:HGNC:48613]
59. PCDHGA11 ENSG00000253873 4 0.804 0.804 - protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]
60. TEX26 ENSG00000175664 7 0.804 0.804 - testis expressed 26 [Source:HGNC Symbol;Acc:HGNC:28622]
61. MAFB ENSG00000204103 4840 0.803 - 0.803 MAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]
62. ERV3-1 ENSG00000213462 25 0.802 0.802 - endogenous retrovirus group 3 member 1, envelope [Source:HGNC Symbol;Acc:HGNC:3454]
63. CARD10 ENSG00000100065 273 0.801 - 0.801 caspase recruitment domain family member 10 [Source:HGNC Symbol;Acc:HGNC:16422]
64. DDN ENSG00000181418 742 0.8 - 0.800 dendrin [Source:HGNC Symbol;Acc:HGNC:24458]
65. NPNT ENSG00000168743 749 0.8 - 0.800 nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
66. TDRD5 ENSG00000162782 15 0.796 - 0.796 tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
67. NTNG1 ENSG00000162631 293 0.793 - 0.793 netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
68. KLK6 ENSG00000167755 1069 0.791 - 0.791 kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
69. MISP ENSG00000099812 7 0.79 - 0.790 mitotic spindle positioning [Source:HGNC Symbol;Acc:HGNC:27000]
70. C5orf66 ENSG00000224186 9 0.79 0.790 - chromosome 5 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:48332]
71. TNFRSF8 ENSG00000120949 11 0.788 - 0.788 TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]
72. LINC01537 ENSG00000227467 5 0.786 - 0.786 long intergenic non-protein coding RNA 1537 [Source:HGNC Symbol;Acc:HGNC:51301]
73. CD38 ENSG00000004468 8 0.784 0.784 - CD38 molecule [Source:HGNC Symbol;Acc:HGNC:1667]
74. C15orf27 C15orf27 41 0.78 - 0.780
75. CA10 ENSG00000154975 225 0.779 - 0.779 carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]
76. SOST ENSG00000167941 830 0.773 - 0.773 sclerostin [Source:HGNC Symbol;Acc:HGNC:13771]
77. S100A7 ENSG00000143556 4 0.771 - 0.771 S100 calcium binding protein A7 [Source:HGNC Symbol;Acc:HGNC:10497]
78. KRT24 ENSG00000167916 1 0.771 - 0.771 keratin 24 [Source:HGNC Symbol;Acc:HGNC:18527]
79. KLRC2 ENSG00000205809 4 0.771 - 0.771 killer cell lectin like receptor C2 [Source:HGNC Symbol;Acc:HGNC:6375]
80. LOC284080 6 0.771 - 0.771 uncharacterized LOC284080
81. TMEM61 ENSG00000143001 5 0.771 - 0.771 transmembrane protein 61 [Source:HGNC Symbol;Acc:HGNC:27296]
82. HEPACAM2 ENSG00000188175 1 0.771 - 0.771 HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
83. LINC00238 1 0.771 - 0.771 long intergenic non-protein coding RNA 238, transcript variant 3
84. NEBL ENSG00000078114 534 0.771 - 0.771 nebulette [Source:HGNC Symbol;Acc:HGNC:16932]
85. LOC101927798 1 0.771 - 0.771 uncharacterized LOC101927798
86. TEX101 ENSG00000131126 1 0.771 - 0.771 testis expressed 101 [Source:HGNC Symbol;Acc:HGNC:30722]
87. LOC101928569 4 0.771 - 0.771 uncharacterized LOC101928569
88. DLG3-AS1 ENSG00000231651 1 0.771 - 0.771 DLG3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40182]
89. LINC00460 ENSG00000233532 3 0.771 - 0.771 long intergenic non-protein coding RNA 460 [Source:HGNC Symbol;Acc:HGNC:42809]
90. LINC00304 ENSG00000180422 3 0.771 - 0.771 long intergenic non-protein coding RNA 304 [Source:HGNC Symbol;Acc:HGNC:26713]
91. NXPE1 ENSG00000095110 3 0.771 - 0.771 neurexophilin and PC-esterase domain family member 1 [Source:HGNC Symbol;Acc:HGNC:28527]
92. CCDC110 ENSG00000168491 19 0.769 0.769 - coiled-coil domain containing 110 [Source:HGNC Symbol;Acc:HGNC:28504]
93. CHI3L1 ENSG00000133048 63 0.763 - 0.763 chitinase 3 like 1 [Source:HGNC Symbol;Acc:HGNC:1932]
94. ANXA1 ENSG00000135046 512 0.763 - 0.763 annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]
95. CTGF ENSG00000118523 4166 0.762 - 0.762 connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
96. ADAM20P1 ENSG00000259158 6 0.76 0.760 - ADAM metallopeptidase domain 20 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:20102]
97. ENPEP ENSG00000138792 1005 0.756 - 0.756 glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
98. GHRL ENSG00000157017 4 0.751 - 0.751 ghrelin and obestatin prepropeptide [Source:HGNC Symbol;Acc:HGNC:18129]
99. SBSPON ENSG00000164764 263 0.749 - 0.749 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
100. C16orf89 ENSG00000153446 7 0.748 - 0.748 chromosome 16 open reading frame 89 [Source:HGNC Symbol;Acc:HGNC:28687]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA