Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00515

Gene Name Gene ID Reads Annotation
LINC00515 ENSG00000260583 47 long intergenic non-protein coding RNA 515 [Source:NCBI gene;Acc:282566]



Genes with expression patterns similar to LINC00515

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00515 ENSG00000260583 47 2 1.000 1.000 long intergenic non-protein coding RNA 515 [Source:NCBI gene;Acc:282566]
2. TULP2 ENSG00000104804 26 0.893 - 0.893 tubby like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]
3. SDR16C6P ENSG00000253542 5 0.889 - 0.889 short chain dehydrogenase/reductase family 16C member 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:35413]
4. TSPAN19 ENSG00000231738 7 0.888 - 0.888 tetraspanin 19 [Source:HGNC Symbol;Acc:HGNC:31886]
5. DEFB124 ENSG00000180383 6 0.88 - 0.880 defensin beta 124 [Source:HGNC Symbol;Acc:HGNC:18104]
6. KCNK9 ENSG00000169427 18 0.879 - 0.879 potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
7. KCNQ5-IT1 ENSG00000233844 16 0.877 - 0.877 KCNQ5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41354]
8. FAM83E ENSG00000105523 14 0.871 - 0.871 family with sequence similarity 83 member E [Source:HGNC Symbol;Acc:HGNC:25972]
9. LINC01492 ENSG00000225564 9 0.87 - 0.870 long intergenic non-protein coding RNA 1492 [Source:HGNC Symbol;Acc:HGNC:51149]
10. EPB42 ENSG00000166947 53 0.858 - 0.858 erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:HGNC:3381]
11. LOC100996634 6 0.857 - 0.857 transmembrane protein FLJ37396, transcript variant X2
12. CXCL16 ENSG00000161921 77 0.851 - 0.851 C-X-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:16642]
13. ALMS1-IT1 ENSG00000230002 127 0.845 - 0.845 ALMS1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41305]
14. RLN1 ENSG00000107018 7 0.843 - 0.843 relaxin 1 [Source:HGNC Symbol;Acc:HGNC:10026]
15. CD244 ENSG00000122223 8 0.839 - 0.839 CD244 molecule [Source:HGNC Symbol;Acc:HGNC:18171]
16. LANCL3 ENSG00000147036 24 0.82 - 0.820 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
17. PSMA8 ENSG00000154611 26 0.818 - 0.818 proteasome subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:22985]
18. DEPDC1-AS1 ENSG00000234264 17 0.815 - 0.815 DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]
19. LOC101929229 9 0.812 - 0.812 uncharacterized LOC101929229
20. FAM228A ENSG00000186453 65 0.811 - 0.811 family with sequence similarity 228 member A [Source:HGNC Symbol;Acc:HGNC:34418]
21. AGTR1 ENSG00000144891 36 0.801 - 0.801 angiotensin II receptor type 1 [Source:HGNC Symbol;Acc:HGNC:336]
22. DNAJC27-AS1 ENSG00000224165 97 0.785 - 0.785 DNAJC27 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42943]
23. FIRRE ENSG00000213468 58 0.785 - 0.785 firre intergenic repeating RNA element [Source:HGNC Symbol;Acc:HGNC:49627]
24. POU6F1 ENSG00000184271 155 0.783 - 0.783 POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]
25. LBP ENSG00000129988 12 0.778 - 0.778 lipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]
26. HELZ2 ENSG00000130589 486 0.777 - 0.777 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
27. LOC401134 22 0.776 - 0.776 uncharacterized LOC401134
28. PTPN6 ENSG00000111679 23 0.775 - 0.775 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]
29. SNHG24 17 0.774 - 0.774 small nucleolar RNA host gene 24
30. RNF217-AS1 ENSG00000236548 20 0.773 - 0.773 RNF217 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:50866]
31. TARSL2 ENSG00000185418 716 0.769 - 0.769 threonyl-tRNA synthetase like 2 [Source:HGNC Symbol;Acc:HGNC:24728]
32. NANOGNB ENSG00000205857 74 0.768 - 0.768 NANOG neighbor homeobox [Source:HGNC Symbol;Acc:HGNC:24958]
33. RGMB-AS1 ENSG00000246763 25 0.765 - 0.765 RGMB antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48666]
34. MAGEB3 ENSG00000198798 21 0.764 - 0.764 MAGE family member B3 [Source:HGNC Symbol;Acc:HGNC:6810]
35. SYT16 ENSG00000139973 18 0.76 - 0.760 synaptotagmin 16 [Source:HGNC Symbol;Acc:HGNC:23142]
36. SPTA1 ENSG00000163554 52 0.759 - 0.759 spectrin alpha, erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11272]
37. NOX1 ENSG00000007952 30 0.757 - 0.757 NADPH oxidase 1 [Source:HGNC Symbol;Acc:HGNC:7889]
38. PKN2-AS1 ENSG00000237505 30 0.753 - 0.753 PKN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50597]
39. S100A14 ENSG00000189334 15 0.753 - 0.753 S100 calcium binding protein A14 [Source:HGNC Symbol;Acc:HGNC:18901]
40. LOC145845 130 0.743 - 0.743 uncharacterized LOC145845
41. TMEM45A ENSG00000181458 1869 0.735 - 0.735 transmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]
42. FAM19A3 ENSG00000184599 151 0.735 - 0.735 family with sequence similarity 19 member A3, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21590]
43. NR1D2 ENSG00000174738 844 0.732 - 0.732 nuclear receptor subfamily 1 group D member 2 [Source:HGNC Symbol;Acc:HGNC:7963]
44. OPHN1 ENSG00000079482 300 0.729 - 0.729 oligophrenin 1 [Source:HGNC Symbol;Acc:HGNC:8148]
45. CDKL2 ENSG00000138769 94 0.727 - 0.727 cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
46. SAXO2 ENSG00000188659 30 0.726 - 0.726 stabilizer of axonemal microtubules 2 [Source:HGNC Symbol;Acc:HGNC:33727]
47. COX8C ENSG00000187581, ENSG00000277018 18 0.722 - 0.722 cytochrome c oxidase subunit 8C [Source:HGNC Symbol;Acc:HGNC:24382]
48. ZNF460 ENSG00000197714 205 0.722 - 0.722 zinc finger protein 460 [Source:HGNC Symbol;Acc:HGNC:21628]
49. LINC00324 ENSG00000178977 91 0.721 - 0.721 long intergenic non-protein coding RNA 324 [Source:HGNC Symbol;Acc:HGNC:26628]
50. LOC100131347 36 0.718 - 0.718 RAD52 motif containing 1 pseudogene
51. SH2D4B ENSG00000178217 15 0.718 - 0.718 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
52. GPR85 ENSG00000164604 325 0.717 - 0.717 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
53. LOC646029 53 0.716 - 0.716 uncharacterized LOC646029
54. KLHL32 ENSG00000186231 136 0.715 - 0.715 kelch like family member 32 [Source:HGNC Symbol;Acc:HGNC:21221]
55. RRN3 ENSG00000085721, ENSG00000278494 2935 0.712 - 0.712 RRN3 homolog, RNA polymerase I transcription factor [Source:HGNC Symbol;Acc:HGNC:30346]
56. AGBL4 ENSG00000186094 25 0.711 - 0.711 ATP/GTP binding protein like 4 [Source:HGNC Symbol;Acc:HGNC:25892]
57. ZBTB11-AS1 ENSG00000256628 176 0.708 - 0.708 ZBTB11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48573]
58. NEK7 ENSG00000151414 969 0.708 - 0.708 NIMA related kinase 7 [Source:HGNC Symbol;Acc:HGNC:13386]
59. C1orf141 ENSG00000203963 18 0.703 - 0.703 chromosome 1 open reading frame 141 [Source:HGNC Symbol;Acc:HGNC:32044]
60. TAF1A ENSG00000143498 798 0.7 - 0.700 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:11532]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA