Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00473

Gene Name Gene ID Reads Annotation
LINC00473 12 long intergenic non-protein coding RNA 473, transcript variant 2



Genes with expression patterns similar to LINC00473

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00473 12 2 1.000 1.000 long intergenic non-protein coding RNA 473, transcript variant 2
2. LINC01031 ENSG00000232077 1 0.9 - 0.900 long intergenic non-protein coding RNA 1031 [Source:HGNC Symbol;Acc:HGNC:49017]
3. KCNAB1-AS2 ENSG00000240596 3 0.9 - 0.900 KCNAB1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40315]
4. BRWD1-AS1 ENSG00000238141 1 0.9 - 0.900 BRWD1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40614]
5. MIR497HG ENSG00000267532 1 0.9 - 0.900 mir-497-195 cluster host gene [Source:HGNC Symbol;Acc:HGNC:39523]
6. SLC5A10 ENSG00000154025 1 0.9 - 0.900 solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
7. ZNF804B ENSG00000182348 5 0.9 - 0.900 zinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]
8. IGFBP7-AS1 ENSG00000245067 1 0.9 - 0.900 IGFBP7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40296]
9. OR5H2 ENSG00000197938 1 0.9 - 0.900 olfactory receptor family 5 subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:14752]
10. TYR ENSG00000077498 1 0.9 - 0.900 tyrosinase [Source:HGNC Symbol;Acc:HGNC:12442]
11. ADTRP ENSG00000111863 3 0.9 - 0.900 androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
12. DGKG ENSG00000058866 3 0.9 - 0.900 diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
13. CEACAM4 ENSG00000105352, ENSG00000274131 1 0.9 - 0.900 carcinoembryonic antigen related cell adhesion molecule 4 [Source:HGNC Symbol;Acc:HGNC:1816]
14. SYS1-DBNDD2 ENSG00000254806 1 0.9 - 0.900 SYS1-DBNDD2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:33535]
15. LINC00221 ENSG00000270816 2 0.9 - 0.900 long intergenic non-protein coding RNA 221 [Source:HGNC Symbol;Acc:HGNC:20169]
16. KCNAB1-AS1 ENSG00000242370 2 0.9 - 0.900 KCNAB1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40316]
17. SMIM2 ENSG00000139656 1 0.9 - 0.900 small integral membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:28776]
18. MMP3 ENSG00000149968 5 0.9 - 0.900 matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]
19. OR2B3 ENSG00000204703, ENSG00000206524, ENSG00000225736, ENSG00000226832, ENSG00000231319, ENSG00000233054, ENSG00000233180, ENSG00000233687 1 0.9 - 0.900 olfactory receptor family 2 subfamily B member 3 [Source:HGNC Symbol;Acc:HGNC:8238]
20. LCN12 ENSG00000184925 9 0.9 - 0.900 lipocalin 12 [Source:HGNC Symbol;Acc:HGNC:28733]
21. GUCA1C ENSG00000138472 1 0.9 - 0.900 guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
22. LINC00479 ENSG00000236384 55 0.897 0.897 - long intergenic non-protein coding RNA 479 [Source:HGNC Symbol;Acc:HGNC:19727]
23. LOC400558 8 0.893 - 0.893 uncharacterized LOC400558
24. LOC101929680 3 0.89 - 0.890 uncharacterized LOC101929680
25. LINC01123 ENSG00000204588 1 0.889 - 0.889 long intergenic non-protein coding RNA 1123 [Source:HGNC Symbol;Acc:HGNC:49269]
26. LOC100507651 LOC100507651 32 0.887 - 0.887
27. SEPT4-AS1 ENSG00000264672 1 0.887 - 0.887 SEPT4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51345]
28. ODF3L2 ENSG00000181781 2 0.887 - 0.887 outer dense fiber of sperm tails 3 like 2 [Source:HGNC Symbol;Acc:HGNC:26841]
29. TM4SF19-TCTEX1D2 ENSG00000273331 1 0.886 - 0.886 TM4SF19-TCTEX1D2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49190]
30. FRMD1 ENSG00000153303 69 0.883 - 0.883 FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]
31. SLC34A1 ENSG00000131183 86 0.88 - 0.880 solute carrier family 34 member 1 [Source:HGNC Symbol;Acc:HGNC:11019]
32. LINC01506 ENSG00000234506 1 0.875 - 0.875 long intergenic non-protein coding RNA 1506 [Source:HGNC Symbol;Acc:HGNC:51187]
33. GLOD5 ENSG00000171433 4 0.874 - 0.874 glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
34. KIAA1045 KIAA1045 12 0.874 0.874 -
35. PDIA2 ENSG00000185615 4 0.87 0.870 - protein disulfide isomerase family A member 2 [Source:HGNC Symbol;Acc:HGNC:14180]
36. LOC101928174 3 0.87 0.870 - uncharacterized LOC101928174
37. KCNH3 ENSG00000135519 8 0.87 0.870 - potassium voltage-gated channel subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:6252]
38. LOC101927523 4 0.87 0.870 - uncharacterized LOC101927523
39. HCG9 ENSG00000204625, ENSG00000206504, ENSG00000227647, ENSG00000234313, ENSG00000234599, ENSG00000236579, ENSG00000237812 3 0.87 0.870 - HLA complex group 9 [Source:HGNC Symbol;Acc:HGNC:21243]
40. OR51B4 ENSG00000183251 5 0.87 0.870 - olfactory receptor family 51 subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:14708]
41. LOC400794 5 0.87 0.870 - uncharacterized LOC400794
42. LINC01248 ENSG00000224128 8 0.87 0.870 - long intergenic non-protein coding RNA 1248 [Source:HGNC Symbol;Acc:HGNC:49842]
43. LINC00550 ENSG00000281778 12 0.87 0.870 - long intergenic non-protein coding RNA 550 [Source:HGNC Symbol;Acc:HGNC:43688]
44. GIP ENSG00000159224 8 0.87 0.870 - gastric inhibitory polypeptide [Source:HGNC Symbol;Acc:HGNC:4270]
45. ACSM4 ENSG00000215009 7 0.866 - 0.866 acyl-CoA synthetase medium chain family member 4 [Source:HGNC Symbol;Acc:HGNC:32016]
46. RGPD5 ENSG00000015568 5 0.862 - 0.862 RANBP2-like and GRIP domain containing 5 [Source:HGNC Symbol;Acc:HGNC:32418]
47. LOC101060553 5 0.862 - 0.862 uncharacterized LOC101060553
48. LOC646029 53 0.858 0.858 - uncharacterized LOC646029
49. SAMD15 ENSG00000100583 16 0.855 0.855 - sterile alpha motif domain containing 15 [Source:HGNC Symbol;Acc:HGNC:18631]
50. CXCL10 ENSG00000169245 1 0.85 - 0.850 C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]
51. HIGD2B ENSG00000175202 3 0.846 - 0.846 HIG1 hypoxia inducible domain family member 2B [Source:HGNC Symbol;Acc:HGNC:26984]
52. SMEK3P SMEK3P 1 0.844 - 0.844
53. VAX1 ENSG00000148704 13 0.841 0.841 - ventral anterior homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12660]
54. FBXO40 ENSG00000163833 9 0.841 0.841 - F-box protein 40 [Source:HGNC Symbol;Acc:HGNC:29816]
55. DDN ENSG00000181418 742 0.838 - 0.838 dendrin [Source:HGNC Symbol;Acc:HGNC:24458]
56. TDRD5 ENSG00000162782 15 0.823 - 0.823 tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
57. DPPA3 ENSG00000187569 33 0.822 0.822 - developmental pluripotency associated 3 [Source:HGNC Symbol;Acc:HGNC:19199]
58. HS6ST3 ENSG00000185352 183 0.819 0.819 - heparan sulfate 6-O-sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:19134]
59. LOC101929596 3 0.818 - 0.818 uncharacterized LOC101929596
60. NLRP8 ENSG00000179709 25 0.818 0.818 - NLR family pyrin domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22940]
61. LINC00052 ENSG00000259527 3 0.814 - 0.814 long intergenic non-protein coding RNA 52 [Source:HGNC Symbol;Acc:HGNC:26455]
62. FTH1P18 ENSG00000243048 8 0.808 0.808 - ferritin heavy chain 1 pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:3988]
63. FLT3 ENSG00000122025 7 0.807 0.807 - fms related tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:3765]
64. CRSP8P ENSG00000248569 12 0.807 0.807 - mediator complex subunit 27 pseudogene [Source:NCBI gene;Acc:441089]
65. SLC51A ENSG00000163959 16 0.804 0.804 - solute carrier family 51 alpha subunit [Source:HGNC Symbol;Acc:HGNC:29955]
66. PLP2 ENSG00000102007 138 0.804 0.804 - proteolipid protein 2 [Source:HGNC Symbol;Acc:HGNC:9087]
67. CCNYL2 ENSG00000182632 8 0.802 0.802 - cyclin Y-like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:23495]
68. SERPINE3 ENSG00000253309 5 0.802 0.802 - serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
69. LOC100506258 20 0.802 0.802 - uncharacterized LOC100506258
70. TEC ENSG00000135605 11 0.802 0.802 - tec protein tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11719]
71. PCDHGC3 ENSG00000240184 7 0.802 0.802 - protocadherin gamma subfamily C, 3 [Source:HGNC Symbol;Acc:HGNC:8716]
72. CDCP2 ENSG00000157211 2 0.798 - 0.798 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
73. VEGFA ENSG00000112715 2715 0.795 - 0.795 vascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]
74. TINAG ENSG00000137251 40 0.793 - 0.793 tubulointerstitial nephritis antigen [Source:HGNC Symbol;Acc:HGNC:14599]
75. GACAT2 ENSG00000265962 1 0.792 - 0.792 gastric cancer associated transcript 2 [Source:HGNC Symbol;Acc:HGNC:50516]
76. MAMDC2 ENSG00000165072, ENSG00000278608 173 0.79 0.790 - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
77. DCAF4L2 ENSG00000176566 10 0.788 0.788 - DDB1 and CUL4 associated factor 4 like 2 [Source:HGNC Symbol;Acc:HGNC:26657]
78. NRIP2 ENSG00000053702 758 0.784 - 0.784 nuclear receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23078]
79. LINC00668 ENSG00000265933 3 0.775 - 0.775 long intergenic non-protein coding RNA 668 [Source:HGNC Symbol;Acc:HGNC:44328]
80. LOC101928324 6 0.772 0.772 - uncharacterized LOC101928324, transcript variant 2
81. DEPDC1-AS1 ENSG00000234264 17 0.772 0.772 - DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]
82. LOC644919 10 0.77 0.770 - uncharacterized LOC644919, transcript variant 2
83. C17orf102 ENSG00000197322 32 0.768 0.768 - chromosome 17 open reading frame 102 [Source:HGNC Symbol;Acc:HGNC:34412]
84. TCL1A ENSG00000100721 42 0.766 0.766 - T cell leukemia/lymphoma 1A [Source:HGNC Symbol;Acc:HGNC:11648]
85. DFNB59 73 0.763 0.763 - deafness, autosomal recessive 59, transcript variant X6
86. LOC101928163 24 0.762 0.762 - uncharacterized LOC101928163
87. CABP5 ENSG00000105507 3 0.76 - 0.760 calcium binding protein 5 [Source:HGNC Symbol;Acc:HGNC:13714]
88. LLPH-AS1 6 0.76 0.760 - LLPH antisense RNA 1 (head to head)
89. NTNG1 ENSG00000162631 293 0.758 - 0.758 netrin G1 [Source:HGNC Symbol;Acc:HGNC:23319]
90. CTD-2270F17.1 ENSG00000253647 9 0.757 0.757 - uncharacterized LOC101928033 [Source:NCBI gene;Acc:101928033]
91. LOC441455 16 0.756 0.756 - makorin ring finger protein 1 pseudogene
92. GOLGA6L5P ENSG00000230373 26 0.755 0.755 - golgin A6 family-like 5, pseudogene [Source:HGNC Symbol;Acc:HGNC:30472]
93. PRR7-AS1 ENSG00000246334 1 0.755 - 0.755 PRR7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27961]
94. TPK1 ENSG00000196511, ENSG00000285075 76 0.753 0.753 - thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:HGNC:17358]
95. LGALS3 ENSG00000131981 100 0.751 0.751 - galectin 3 [Source:HGNC Symbol;Acc:HGNC:6563]
96. CERS3-AS1 ENSG00000259430 5 0.749 0.749 - CERS3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51431]
97. AADACL4 ENSG00000204518 5 0.748 - 0.748 arylacetamide deacetylase like 4 [Source:HGNC Symbol;Acc:HGNC:32038]
98. UTF1 ENSG00000171794 4 0.748 - 0.748 undifferentiated embryonic cell transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12634]
99. GOLGA8S ENSG00000261739 6 0.746 0.746 - golgin A8 family member S [Source:HGNC Symbol;Acc:HGNC:44409]
100. KLK8 ENSG00000129455 12 0.744 0.744 - kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA