Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for EFNB1

Gene Name Gene ID Reads Annotation
EFNB1 ENSG00000090776 2908 ephrin B1 [Source:HGNC Symbol;Acc:HGNC:3226]



Genes with expression patterns similar to EFNB1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. EFNB1 ENSG00000090776 2908 2 1.000 1.000 ephrin B1 [Source:HGNC Symbol;Acc:HGNC:3226]
2. MYL9 ENSG00000101335 4604 0.808 0.808 - myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]
3. SPINT2 ENSG00000167642 25745 0.798 0.798 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
4. MYH9 ENSG00000100345 12447 0.786 0.786 - myosin heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:7579]
5. TIMP1 ENSG00000102265 19585 0.781 0.781 - TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]
6. SPARC ENSG00000113140 39707 0.777 0.777 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
7. RFTN1 ENSG00000131378 3531 0.774 0.774 - raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]
8. DSP ENSG00000096696 5097 0.771 0.771 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
9. PLAGL1 ENSG00000118495 6344 0.765 0.765 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
10. COL1A1 ENSG00000108821 71290 0.761 0.761 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
11. HAND2 ENSG00000164107 5416 0.757 0.757 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
12. KCTD12 ENSG00000178695 23035 0.752 0.752 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
13. CD151 ENSG00000177697 7219 0.752 0.752 - CD151 molecule (Raph blood group) [Source:HGNC Symbol;Acc:HGNC:1630]
14. NFIB ENSG00000147862 8306 0.75 0.750 - nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
15. CTGF ENSG00000118523 4166 0.749 0.749 - connective tissue growth factor [Source:HGNC Symbol;Acc:HGNC:2500]
16. CSRP1 ENSG00000159176 5731 0.747 0.747 - cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]
17. PDGFRB ENSG00000113721 2455 0.746 0.746 - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
18. LAMA5 ENSG00000130702 4073 0.746 0.746 - laminin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6485]
19. MIR503HG ENSG00000223749 600 0.746 0.746 - MIR503 host gene [Source:HGNC Symbol;Acc:HGNC:28258]
20. FNDC3B ENSG00000075420 3523 0.745 0.745 - fibronectin type III domain containing 3B [Source:HGNC Symbol;Acc:HGNC:24670]
21. GUCY1B3 1302 0.744 0.744 - guanylate cyclase 1, soluble, beta 3, transcript variant X5
22. RBPMS ENSG00000157110 10094 0.744 0.744 - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
23. COL5A1 ENSG00000130635 11942 0.74 0.740 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
24. HIF3A ENSG00000124440 866 0.738 0.738 - hypoxia inducible factor 3 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15825]
25. AHNAK ENSG00000124942 11800 0.737 0.737 - AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
26. PEG3 ENSG00000198300 11207 0.736 0.736 - paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
27. CTSB ENSG00000164733 7440 0.736 0.736 - cathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]
28. ITM2C ENSG00000135916 51525 0.736 0.736 - integral membrane protein 2C [Source:HGNC Symbol;Acc:HGNC:6175]
29. FREM2 ENSG00000150893 3376 0.735 0.735 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
30. MAGI2-AS3 ENSG00000234456 5066 0.733 0.733 - MAGI2 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40862]
31. NFATC2 ENSG00000101096 898 0.733 0.733 - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
32. BST2 ENSG00000130303 1588 0.73 0.730 - bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]
33. COL6A2 ENSG00000142173 2550 0.73 0.730 - collagen type VI alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2212]
34. NPHS1 ENSG00000161270 1427 0.73 0.730 - NPHS1, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]
35. GATA6 ENSG00000141448 3614 0.729 0.729 - GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
36. COL1A2 ENSG00000164692 43340 0.728 0.728 - collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
37. ANXA1 ENSG00000135046 512 0.728 0.728 - annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]
38. KRT19 ENSG00000171345 1700 0.728 0.728 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
39. CDKN1C ENSG00000129757, ENSG00000273707 21622 0.728 0.728 - cyclin dependent kinase inhibitor 1C [Source:HGNC Symbol;Acc:HGNC:1786]
40. RHOBTB3 ENSG00000164292 20064 0.727 0.727 - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
41. SGK1 ENSG00000118515 1716 0.726 0.726 - serum/glucocorticoid regulated kinase 1 [Source:HGNC Symbol;Acc:HGNC:10810]
42. LEPROT ENSG00000213625 6185 0.726 0.726 - leptin receptor overlapping transcript [Source:HGNC Symbol;Acc:HGNC:29477]
43. MAFB ENSG00000204103 4840 0.725 0.725 - MAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]
44. TCF21 ENSG00000118526 1286 0.725 0.725 - transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]
45. NEBL ENSG00000078114 534 0.725 0.725 - nebulette [Source:HGNC Symbol;Acc:HGNC:16932]
46. SGCG ENSG00000102683 246 0.725 0.725 - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
47. SYTL1 ENSG00000142765 333 0.724 0.724 - synaptotagmin like 1 [Source:HGNC Symbol;Acc:HGNC:15584]
48. PODXL ENSG00000128567 4375 0.723 0.723 - podocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]
49. SMAD6 ENSG00000137834 805 0.722 0.722 - SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]
50. RBMS1 ENSG00000153250 11118 0.722 0.722 - RNA binding motif single stranded interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9907]
51. SFRP1 ENSG00000104332 280077 0.722 0.722 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
52. SLC9A3R1 ENSG00000109062 4036 0.72 0.720 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
53. COL3A1 ENSG00000168542 140021 0.72 0.720 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
54. APOBEC3C ENSG00000244509 3066 0.719 0.719 - apolipoprotein B mRNA editing enzyme catalytic subunit 3C [Source:HGNC Symbol;Acc:HGNC:17353]
55. GRN ENSG00000030582 15538 0.717 0.717 - granulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]
56. IFITM3 ENSG00000142089 57239 0.712 0.712 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
57. NFIC ENSG00000141905 3106 0.71 0.710 - nuclear factor I C [Source:HGNC Symbol;Acc:HGNC:7786]
58. KLK6 ENSG00000167755 1069 0.71 0.710 - kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]
59. ALPK2 ENSG00000198796 503 0.708 0.708 - alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:20565]
60. ARHGAP23 ENSG00000273780, ENSG00000275832 6311 0.707 0.707 - Rho GTPase activating protein 23 [Source:HGNC Symbol;Acc:HGNC:29293]
61. SOST ENSG00000167941 830 0.704 0.704 - sclerostin [Source:HGNC Symbol;Acc:HGNC:13771]
62. JUP ENSG00000173801 5100 0.703 0.703 - junction plakoglobin [Source:HGNC Symbol;Acc:HGNC:6207]
63. GADD45A ENSG00000116717 1743 0.702 0.702 - growth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]
64. PXDN ENSG00000130508 44183 0.702 0.702 - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
65. FBXO17 ENSG00000269190, ENSG00000282954 4383 0.702 0.702 - F-box protein 17 [Source:HGNC Symbol;Acc:HGNC:18754]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA