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Results for ALMS1-IT1

Gene Name Gene ID Reads Annotation
ALMS1-IT1 ENSG00000230002 127 ALMS1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41305]



Genes with expression patterns similar to ALMS1-IT1

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. ALMS1-IT1 ENSG00000230002 127 2 1.000 1.000 ALMS1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41305]
2. SDR16C6P ENSG00000253542 5 0.94 - 0.940 short chain dehydrogenase/reductase family 16C member 6, pseudogene [Source:HGNC Symbol;Acc:HGNC:35413]
3. TSPAN19 ENSG00000231738 7 0.938 - 0.938 tetraspanin 19 [Source:HGNC Symbol;Acc:HGNC:31886]
4. TULP2 ENSG00000104804 26 0.928 - 0.928 tubby like protein 2 [Source:HGNC Symbol;Acc:HGNC:12424]
5. FAM83E ENSG00000105523 14 0.926 - 0.926 family with sequence similarity 83 member E [Source:HGNC Symbol;Acc:HGNC:25972]
6. DEFB124 ENSG00000180383 6 0.925 - 0.925 defensin beta 124 [Source:HGNC Symbol;Acc:HGNC:18104]
7. KCNK9 ENSG00000169427 18 0.923 - 0.923 potassium two pore domain channel subfamily K member 9 [Source:HGNC Symbol;Acc:HGNC:6283]
8. LINC01492 ENSG00000225564 9 0.915 - 0.915 long intergenic non-protein coding RNA 1492 [Source:HGNC Symbol;Acc:HGNC:51149]
9. LOC100996634 6 0.908 - 0.908 transmembrane protein FLJ37396, transcript variant X2
10. KCNQ5-IT1 ENSG00000233844 16 0.907 - 0.907 KCNQ5 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41354]
11. RLN1 ENSG00000107018 7 0.894 - 0.894 relaxin 1 [Source:HGNC Symbol;Acc:HGNC:10026]
12. CD244 ENSG00000122223 8 0.893 - 0.893 CD244 molecule [Source:HGNC Symbol;Acc:HGNC:18171]
13. EPB42 ENSG00000166947 53 0.884 - 0.884 erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:HGNC:3381]
14. CXCL16 ENSG00000161921 77 0.875 - 0.875 C-X-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:16642]
15. LANCL3 ENSG00000147036 24 0.865 - 0.865 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
16. AGTR1 ENSG00000144891 36 0.86 - 0.860 angiotensin II receptor type 1 [Source:HGNC Symbol;Acc:HGNC:336]
17. LOC101929229 9 0.859 - 0.859 uncharacterized LOC101929229
18. DEPDC1-AS1 ENSG00000234264 17 0.854 - 0.854 DEPDC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50592]
19. PSMA8 ENSG00000154611 26 0.846 - 0.846 proteasome subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:22985]
20. LINC00515 ENSG00000260583 47 0.845 - 0.845 long intergenic non-protein coding RNA 515 [Source:NCBI gene;Acc:282566]
21. FAM228A ENSG00000186453 65 0.842 - 0.842 family with sequence similarity 228 member A [Source:HGNC Symbol;Acc:HGNC:34418]
22. DNAJC27-AS1 ENSG00000224165 97 0.834 - 0.834 DNAJC27 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42943]
23. RGMB-AS1 ENSG00000246763 25 0.826 - 0.826 RGMB antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48666]
24. SH2D4B ENSG00000178217 15 0.825 - 0.825 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
25. CDKL2 ENSG00000138769 94 0.824 - 0.824 cyclin dependent kinase like 2 [Source:HGNC Symbol;Acc:HGNC:1782]
26. FIRRE ENSG00000213468 58 0.819 - 0.819 firre intergenic repeating RNA element [Source:HGNC Symbol;Acc:HGNC:49627]
27. LBP ENSG00000129988 12 0.818 - 0.818 lipopolysaccharide binding protein [Source:HGNC Symbol;Acc:HGNC:6517]
28. MAGEB3 ENSG00000198798 21 0.818 - 0.818 MAGE family member B3 [Source:HGNC Symbol;Acc:HGNC:6810]
29. NOX1 ENSG00000007952 30 0.814 - 0.814 NADPH oxidase 1 [Source:HGNC Symbol;Acc:HGNC:7889]
30. LOC401134 22 0.808 - 0.808 uncharacterized LOC401134
31. FAM19A3 ENSG00000184599 151 0.804 - 0.804 family with sequence similarity 19 member A3, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21590]
32. ZNF460 ENSG00000197714 205 0.803 - 0.803 zinc finger protein 460 [Source:HGNC Symbol;Acc:HGNC:21628]
33. SYT16 ENSG00000139973 18 0.799 - 0.799 synaptotagmin 16 [Source:HGNC Symbol;Acc:HGNC:23142]
34. LOC100131347 36 0.797 - 0.797 RAD52 motif containing 1 pseudogene
35. PKN2-AS1 ENSG00000237505 30 0.792 - 0.792 PKN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50597]
36. NANOGNB ENSG00000205857 74 0.792 - 0.792 NANOG neighbor homeobox [Source:HGNC Symbol;Acc:HGNC:24958]
37. S100A14 ENSG00000189334 15 0.791 - 0.791 S100 calcium binding protein A14 [Source:HGNC Symbol;Acc:HGNC:18901]
38. RASSF8 ENSG00000123094 1293 0.789 - 0.789 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
39. RNF217-AS1 ENSG00000236548 20 0.789 - 0.789 RNF217 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:50866]
40. MAK ENSG00000111837 104 0.785 - 0.785 male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
41. LOC145845 130 0.784 - 0.784 uncharacterized LOC145845
42. TAF1A ENSG00000143498 798 0.784 - 0.784 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:11532]
43. SAXO2 ENSG00000188659 30 0.78 - 0.780 stabilizer of axonemal microtubules 2 [Source:HGNC Symbol;Acc:HGNC:33727]
44. HTATIP2 ENSG00000109854 118 0.778 - 0.778 HIV-1 Tat interactive protein 2 [Source:HGNC Symbol;Acc:HGNC:16637]
45. POU6F1 ENSG00000184271 155 0.776 - 0.776 POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]
46. SNHG24 17 0.772 - 0.772 small nucleolar RNA host gene 24
47. SPTA1 ENSG00000163554 52 0.763 - 0.763 spectrin alpha, erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11272]
48. PTPN6 ENSG00000111679 23 0.763 - 0.763 protein tyrosine phosphatase, non-receptor type 6 [Source:HGNC Symbol;Acc:HGNC:9658]
49. TARSL2 ENSG00000185418 716 0.761 - 0.761 threonyl-tRNA synthetase like 2 [Source:HGNC Symbol;Acc:HGNC:24728]
50. KLHL32 ENSG00000186231 136 0.761 - 0.761 kelch like family member 32 [Source:HGNC Symbol;Acc:HGNC:21221]
51. NEK7 ENSG00000151414 969 0.76 - 0.760 NIMA related kinase 7 [Source:HGNC Symbol;Acc:HGNC:13386]
52. ARHGEF33 ENSG00000214694 29 0.756 - 0.756 Rho guanine nucleotide exchange factor 33 [Source:HGNC Symbol;Acc:HGNC:37252]
53. SLC16A7 ENSG00000118596 337 0.754 - 0.754 solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
54. C1orf141 ENSG00000203963 18 0.754 - 0.754 chromosome 1 open reading frame 141 [Source:HGNC Symbol;Acc:HGNC:32044]
55. LINC00324 ENSG00000178977 91 0.749 - 0.749 long intergenic non-protein coding RNA 324 [Source:HGNC Symbol;Acc:HGNC:26628]
56. LOC646029 53 0.748 - 0.748 uncharacterized LOC646029
57. BIN2 ENSG00000110934 62 0.746 - 0.746 bridging integrator 2 [Source:HGNC Symbol;Acc:HGNC:1053]
58. TRPC3 ENSG00000138741 54 0.744 - 0.744 transient receptor potential cation channel subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:12335]
59. PLCL1 ENSG00000115896 205 0.743 - 0.743 phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
60. MTUS2 ENSG00000132938 408 0.743 - 0.743 microtubule associated scaffold protein 2 [Source:HGNC Symbol;Acc:HGNC:20595]
61. SLAIN2 ENSG00000109171 2800 0.738 - 0.738 SLAIN motif family member 2 [Source:HGNC Symbol;Acc:HGNC:29282]
62. HELZ2 ENSG00000130589 486 0.737 - 0.737 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
63. GPR85 ENSG00000164604 325 0.732 - 0.732 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
64. RRN3 ENSG00000085721, ENSG00000278494 2935 0.732 - 0.732 RRN3 homolog, RNA polymerase I transcription factor [Source:HGNC Symbol;Acc:HGNC:30346]
65. OPHN1 ENSG00000079482 300 0.731 - 0.731 oligophrenin 1 [Source:HGNC Symbol;Acc:HGNC:8148]
66. ATL3 ENSG00000184743 1826 0.727 - 0.727 atlastin GTPase 3 [Source:HGNC Symbol;Acc:HGNC:24526]
67. SMIM13 ENSG00000224531 2659 0.723 - 0.723 small integral membrane protein 13 [Source:HGNC Symbol;Acc:HGNC:27356]
68. USPL1 ENSG00000132952 697 0.721 - 0.721 ubiquitin specific peptidase like 1 [Source:HGNC Symbol;Acc:HGNC:20294]
69. WDR37 ENSG00000047056 780 0.72 - 0.720 WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
70. HCFC2 ENSG00000111727 568 0.719 - 0.719 host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
71. TMEM45A ENSG00000181458 1869 0.719 - 0.719 transmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]
72. ZNF721 ENSG00000182903 1453 0.715 - 0.715 zinc finger protein 721 [Source:HGNC Symbol;Acc:HGNC:29425]
73. THAP9 ENSG00000168152 324 0.713 - 0.713 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
74. ZNF624 ENSG00000197566 1210 0.708 - 0.708 zinc finger protein 624 [Source:HGNC Symbol;Acc:HGNC:29254]
75. LTBP2 ENSG00000119681 40 0.704 - 0.704 latent transforming growth factor beta binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6715]
76. CLDN7 ENSG00000181885 191 0.703 - 0.703 claudin 7 [Source:HGNC Symbol;Acc:HGNC:2049]
77. CRYBG3 ENSG00000080200 63 0.702 - 0.702 crystallin beta-gamma domain containing 3 [Source:HGNC Symbol;Acc:HGNC:34427]
78. LOC101927740 61 0.702 - 0.702 uncharacterized LOC101927740
79. NFYC-AS1 ENSG00000272145 272 0.7 - 0.700 NFYC antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49451]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA