Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo2, section s82.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 10504.12 78740.28
2. eef1a1l1 ENSDARG00000020850 3151.24 23622.12 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
3. tpma ENSDARG00000033683 3151.24 23622.12 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. apoc1l apoc1l 2100.82 15748.03
5. cct6a ENSDARG00000021252 2100.82 15748.03 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
6. ckma ENSDARG00000035327, ENSDARG00000114671 2100.82 15748.03 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. ckmb ENSDARG00000040565 2100.82 15748.03 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. fabp3 ENSDARG00000023290 2100.82 15748.03 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
9. gnb2l1 2100.82 15748.03 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
10. hmgn2 ENSDARG00000099572 2100.82 15748.03 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
11. hoxb9a ENSDARG00000056023 2100.82 15748.03 homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
12. mt-nd2 ENSDARG00000063899 2100.82 15748.03 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. nhp2 ENSDARG00000069422 2100.82 15748.03 NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
14. pabpc1a ENSDARG00000017219 2100.82 15748.03 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
15. ptmab ENSDARG00000101766 2100.82 15748.03 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
16. rpl10a ENSDARG00000042905, ENSDARG00000115649 2100.82 15748.03 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
17. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 2100.82 15748.03 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
18. tnnc2 ENSDARG00000070835, ENSDARG00000111155 2100.82 15748.03 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
19. BX511086.1 BX511086.1 1050.41 7874.01
20. EPHB3 1050.41 7874.01 EPH receptor B3
21. HNRNPA2B1 HNRNPA2B1 1050.41 7874.01
22. MYO5C ENSDARG00000104235 1050.41 7874.01 myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
23. SLC9A1 ENSDARG00000067784 1050.41 7874.01 solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
24. TUBA1A ENSDARG00000001889 1050.41 7874.01 tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
25. abca12 ENSDARG00000074749 1050.41 7874.01 ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
26. acta1b ENSDARG00000055618 1050.41 7874.01 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
27. add3a ENSDARG00000040874 1050.41 7874.01 adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
28. aldoab ENSDARG00000034470 1050.41 7874.01 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
29. amd1 ENSDARG00000043856, ENSDARG00000111778 1050.41 7874.01 adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
30. atp5g3b 1050.41 7874.01 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
31. aurka ENSDARG00000012485 1050.41 7874.01 aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
32. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 1050.41 7874.01 BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
33. bcam ENSDARG00000090190 1050.41 7874.01 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
34. bhlhe22 ENSDARG00000058039 1050.41 7874.01 basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
35. bin2b ENSDARG00000010255 1050.41 7874.01 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
36. calm2a ENSDARG00000031427, ENSDARG00000111871 1050.41 7874.01 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
37. ccnt2b ENSDARG00000036510 1050.41 7874.01 cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
38. celf2 ENSDARG00000002131, ENSDARG00000110267 1050.41 7874.01 cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
39. col9a1 col9a1 1050.41 7874.01
40. cox10 ENSDARG00000034309, ENSDARG00000113352 1050.41 7874.01 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
41. cox8a ENSDARG00000095273 1050.41 7874.01 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
42. crygm2d3 ENSDARG00000088823 1050.41 7874.01 crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
43. eef1g ENSDARG00000056119 1050.41 7874.01 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
44. eif3ha ENSDARG00000102452 1050.41 7874.01 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
45. eif5a ENSDARG00000017235 1050.41 7874.01 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
46. eno2 ENSDARG00000014287 1050.41 7874.01 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
47. erc1b ENSDARG00000031930 1050.41 7874.01 ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
48. faua ENSDARG00000099022 1050.41 7874.01 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
49. gapdh ENSDARG00000043457 1050.41 7874.01 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
50. h2afy2_1 ENSDARG00000087897 1050.41 7874.01 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
51. h3f3a 1050.41 7874.01 H3 histone, family 3A, transcript variant X1
52. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 1050.41 7874.01 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
53. hbae3 ENSDARG00000079305 1050.41 7874.01 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
54. hbbe3 ENSDARG00000038147, ENSDARG00000109344 1050.41 7874.01 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
55. hist2h2l ENSDARG00000068996, ENSDARG00000112150 1050.41 7874.01 histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
56. hoxb4a ENSDARG00000013533 1050.41 7874.01 homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
57. hsp90ab1 ENSDARG00000029150 1050.41 7874.01 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
58. hspa8 ENSDARG00000068992, ENSDARG00000114726 1050.41 7874.01 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
59. krt4 ENSDARG00000017624, ENSDARG00000115790 1050.41 7874.01 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
60. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1050.41 7874.01 l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
61. lig3 ENSDARG00000052553 1050.41 7874.01 ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
62. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 1050.41 7874.01 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
63. mt-co1 ENSDARG00000063905 1050.41 7874.01 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
64. mt-nd1 ENSDARG00000063895 1050.41 7874.01 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
65. myhz1.2 ENSDARG00000067995 1050.41 7874.01 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
66. mylpfb ENSDARG00000002589 1050.41 7874.01 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
67. mylz3 ENSDARG00000017441 1050.41 7874.01 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
68. nacad ENSDARG00000012347 1050.41 7874.01 NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
69. nol11 ENSDARG00000026767 1050.41 7874.01 nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
70. notch2 ENSDARG00000043130 1050.41 7874.01 notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
71. notch3 ENSDARG00000052139 1050.41 7874.01 notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
72. nucks1a ENSDARG00000078473 1050.41 7874.01 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
73. obsl1b ENSDARG00000077388 1050.41 7874.01 obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
74. pgam2 ENSDARG00000057571 1050.41 7874.01 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
75. postnb ENSDARG00000104267 1050.41 7874.01 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
76. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1050.41 7874.01 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
77. rab2a ENSDARG00000020261 1050.41 7874.01 RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
78. ranbp10 ENSDARG00000062138, ENSDARG00000110661 1050.41 7874.01 RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
79. rnf150a ENSDARG00000024827 1050.41 7874.01 ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
80. rpl11 ENSDARG00000043509 1050.41 7874.01 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
81. rpl19 ENSDARG00000013307 1050.41 7874.01 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
82. rpl23a ENSDARG00000006316 1050.41 7874.01 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
83. rpl31 ENSDARG00000053365 1050.41 7874.01 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
84. rpl36 ENSDARG00000100588 1050.41 7874.01 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
85. rpl8 ENSDARG00000014867 1050.41 7874.01 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
86. rps10 ENSDARG00000034897 1050.41 7874.01 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
87. rps25 ENSDARG00000041811 1050.41 7874.01 ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
88. seta ENSDARG00000031495 1050.41 7874.01 SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
89. slc25a22 1050.41 7874.01 solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
90. slc25a47a ENSDARG00000059923 1050.41 7874.01 solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
91. sptbn2 ENSDARG00000053956 1050.41 7874.01 spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
92. thoc2 ENSDARG00000037503 1050.41 7874.01 THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
93. uqcrc2a ENSDARG00000014794 1050.41 7874.01 ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
94. uqcrq ENSDARG00000029064, ENSDARG00000116372 1050.41 7874.01 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
95. vgll4b ENSDARG00000103730 1050.41 7874.01 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
96. vps51 ENSDARG00000062016, ENSDARG00000110076 1050.41 7874.01 vacuolar protein sorting 51 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6008]
97. yipf4 ENSDARG00000030957, ENSDARG00000109994 1050.41 7874.01 Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
98. zgc:112425 zgc:112425 1050.41 7874.01
99. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 1050.41 7874.01 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
100. 5S_rRNA 5S_rRNA 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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