Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo2, section s74.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 18191.23 136363.70 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 6063.74 45454.54
3. CABZ01055343.2 CABZ01055343.2 6063.74 45454.54
4. MRPL47 ENSDARG00000075743, ENSDARG00000114962 6063.74 45454.54 mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
5. actc1b ENSDARG00000099197 6063.74 45454.54 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
6. apoa1a ENSDARG00000012076, ENSDARG00000110395 6063.74 45454.54 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
7. cd164 ENSDARG00000013628 6063.74 45454.54 CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
8. dnajc18 ENSDARG00000056005 6063.74 45454.54 DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
9. hnrnpab hnrnpab 6063.74 45454.54
10. letm2 ENSDARG00000077515 6063.74 45454.54 leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
11. mcm7 ENSDARG00000101180 6063.74 45454.54 minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
12. ppp4ca ENSDARG00000070570 6063.74 45454.54 protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
13. rpl39 ENSDARG00000036316, ENSDARG00000117167 6063.74 45454.54 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
14. rplp2 ENSDARG00000101406 6063.74 45454.54 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
15. rps18 ENSDARG00000100392 6063.74 45454.54 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
16. tnnt3b ENSDARG00000068457 6063.74 45454.54 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
17. top1l ENSDARG00000070545 6063.74 45454.54 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
18. tubb5 ENSDARG00000037997 6063.74 45454.54 tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
19. xbp1 ENSDARG00000035622 6063.74 45454.54 X-box binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-011210-2]
20. zbtb10 ENSDARG00000077101 6063.74 45454.54 zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
21. 5S_rRNA 5S_rRNA 0.00 0.00
22. 5S_rRNA_1 5S_rRNA_1 0.00 0.00
23. 5S_rRNA_10 5S_rRNA_10 0.00 0.00
24. 5S_rRNA_11 5S_rRNA_11 0.00 0.00
25. 5S_rRNA_12 5S_rRNA_12 0.00 0.00
26. 5S_rRNA_13 5S_rRNA_13 0.00 0.00
27. 5S_rRNA_14 5S_rRNA_14 0.00 0.00
28. 5S_rRNA_15 5S_rRNA_15 0.00 0.00
29. 5S_rRNA_16 5S_rRNA_16 0.00 0.00
30. 5S_rRNA_17 5S_rRNA_17 0.00 0.00
31. 5S_rRNA_18 5S_rRNA_18 0.00 0.00
32. 5S_rRNA_19 5S_rRNA_19 0.00 0.00
33. 5S_rRNA_2 5S_rRNA_2 0.00 0.00
34. 5S_rRNA_20 5S_rRNA_20 0.00 0.00
35. 5S_rRNA_21 5S_rRNA_21 0.00 0.00
36. 5S_rRNA_22 5S_rRNA_22 0.00 0.00
37. 5S_rRNA_23 5S_rRNA_23 0.00 0.00
38. 5S_rRNA_24 5S_rRNA_24 0.00 0.00
39. 5S_rRNA_25 5S_rRNA_25 0.00 0.00
40. 5S_rRNA_26 5S_rRNA_26 0.00 0.00
41. 5S_rRNA_27 5S_rRNA_27 0.00 0.00
42. 5S_rRNA_28 5S_rRNA_28 0.00 0.00
43. 5S_rRNA_29 5S_rRNA_29 0.00 0.00
44. 5S_rRNA_3 5S_rRNA_3 0.00 0.00
45. 5S_rRNA_30 5S_rRNA_30 0.00 0.00
46. 5S_rRNA_31 5S_rRNA_31 0.00 0.00
47. 5S_rRNA_4 5S_rRNA_4 0.00 0.00
48. 5S_rRNA_5 5S_rRNA_5 0.00 0.00
49. 5S_rRNA_6 5S_rRNA_6 0.00 0.00
50. 5S_rRNA_7 5S_rRNA_7 0.00 0.00
51. 5S_rRNA_8 5S_rRNA_8 0.00 0.00
52. 5S_rRNA_9 5S_rRNA_9 0.00 0.00
53. 5_8S_rRNA 5_8S_rRNA 0.00 0.00
54. 5_8S_rRNA_1 5_8S_rRNA_1 0.00 0.00
55. 5_8S_rRNA_2 5_8S_rRNA_2 0.00 0.00
56. 5_8S_rRNA_3 5_8S_rRNA_3 0.00 0.00
57. 5_8S_rRNA_4 5_8S_rRNA_4 0.00 0.00
58. 5_8S_rRNA_5 5_8S_rRNA_5 0.00 0.00
59. AADAT ENSDARG00000011410 0.00 0.00 aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
60. AAED1 ENSDARG00000075299 0.00 0.00 AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
61. AAK1 AAK1 0.00 0.00
62. ABCA7 ABCA7 0.00 0.00
63. ABCC1 ENSDARG00000104719 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-15]
64. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
65. ABCC3 ENSDARG00000096662 0.00 0.00 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
66. ABCC6 ABCC6 0.00 0.00
67. ABCC6_1 ABCC6_1 0.00 0.00
68. ABCD2 ENSDARG00000059409 0.00 0.00 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
69. ABCD2_1 ABCD2_1 0.00 0.00
70. ABCF3 ENSDARG00000089705 0.00 0.00 ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
71. ABHD12B ABHD12B 0.00 0.00
72. ABHD12B_1 ABHD12B_1 0.00 0.00
73. ABHD15 ABHD15 0.00 0.00
74. ABHD17A ABHD17A 0.00 0.00
75. ABHD17A_1 ABHD17A_1 0.00 0.00
76. ABI3 ABI3 0.00 0.00
77. ABI3BP 0.00 0.00 ABI family member 3 binding protein, transcript variant X3
78. ABI3_1 ABI3_1 0.00 0.00
79. ABR ENSDARG00000095180 0.00 0.00 ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
80. ABR_1 ABR_1 0.00 0.00
81. ABTB1 ENSDARG00000063354 0.00 0.00 ankyrin repeat and BTB (POZ) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-141212-241]
82. ABTB2 ABTB2 0.00 0.00
83. AC024175.11 AC024175.11 0.00 0.00
84. AC024175.17 AC024175.17 0.00 0.00
85. AC024175.21 AC024175.21 0.00 0.00
86. AC024175.9 AC024175.9 0.00 0.00
87. ACAP2 ENSDARG00000060783 0.00 0.00 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
88. ACAP3 ACAP3 0.00 0.00
89. ACBD3 ENSDARG00000042623 0.00 0.00 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
90. ACER2 ENSDARG00000077782 0.00 0.00 alkaline ceramidase 2 [Source:ZFIN;Acc:ZDB-GENE-121026-1]
91. ACKR3 ACKR3 0.00 0.00
92. ACOT12 ENSDARG00000054534 0.00 0.00 acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
93. ACP2 ENSDARG00000007244 0.00 0.00 acid phosphatase 2, lysosomal [Source:ZFIN;Acc:ZDB-GENE-050306-40]
94. ACSL1 ACSL1 0.00 0.00
95. ACSL6 0.00 0.00 acyl-CoA synthetase long-chain family member 6
96. ACTL7B ACTL7B 0.00 0.00
97. ACTN2 ACTN2 0.00 0.00
98. ACTN4 ENSDARG00000099786 0.00 0.00 actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
99. ACTN4_1 ACTN4_1 0.00 0.00
100. ACTN4_2 ACTN4_2 0.00 0.00
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA