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Experiment Zebrafish_40hpf_whole_embryo2, section s72.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 5910.23 44303.73
2. ckmb ENSDARG00000040565 4221.59 31645.50 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 3377.28 25316.46 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. mt-nd2 ENSDARG00000063899 3377.28 25316.46 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
5. mt-co2 ENSDARG00000063908 2532.96 18987.34 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. ahnak ENSDARG00000061764 1688.64 12658.23 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
7. apoa2 ENSDARG00000015866 1688.64 12658.23 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
8. atp2a1 ENSDARG00000020574 1688.64 12658.23 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
9. cox6b2 ENSDARG00000037860 1688.64 12658.23 cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
10. eef1a1l1 ENSDARG00000020850 1688.64 12658.23 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
11. eef2b ENSDARG00000100371, ENSDARG00000109247 1688.64 12658.23 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
12. oxnad1 ENSDARG00000062664 1688.64 12658.23 oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
13. ptmab ENSDARG00000101766 1688.64 12658.23 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
14. pvalb1 ENSDARG00000037789 1688.64 12658.23 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
15. rpl8 ENSDARG00000014867 1688.64 12658.23 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
16. rps26l ENSDARG00000030408 1688.64 12658.23 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
17. BX511252.1 BX511252.1 844.32 6329.11
18. C3H16orf72 C3H16orf72 844.32 6329.11
19. CCDC150 CCDC150 844.32 6329.11
20. ENDOD1_5 ENDOD1_5 844.32 6329.11
21. FAM210B ENSDARG00000052638 844.32 6329.11 family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
22. FP067396.1 FP067396.1 844.32 6329.11
23. HMGXB4_1 HMGXB4_1 844.32 6329.11
24. KCNAB1 KCNAB1 844.32 6329.11
25. LENG8 ENSDARG00000076805, ENSDARG00000113326 844.32 6329.11 leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
26. RPL29 ENSDARG00000077717 844.32 6329.11 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
27. RPL37A RPL37A 844.32 6329.11
28. SSBP4 ENSDARG00000056483 844.32 6329.11 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
29. Sep-02 Sep-02 844.32 6329.11
30. UBE2D2 ENSDARG00000043484 844.32 6329.11 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
31. acss2 ENSDARG00000037781, ENSDARG00000112371 844.32 6329.11 acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
32. actb2 ENSDARG00000037870 844.32 6329.11 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
33. actc1b ENSDARG00000099197 844.32 6329.11 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
34. add1 ENSDARG00000103962 844.32 6329.11 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
35. agrn ENSDARG00000079388, ENSDARG00000110127 844.32 6329.11 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
36. alas2 ENSDARG00000038643, ENSDARG00000113125 844.32 6329.11 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
37. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 844.32 6329.11 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
38. and3 ENSDARG00000056873 844.32 6329.11 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
39. apoa1a ENSDARG00000012076, ENSDARG00000110395 844.32 6329.11 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
40. apoc1l apoc1l 844.32 6329.11
41. arhgef12b ENSDARG00000100913 844.32 6329.11 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
42. atp1b1b ENSDARG00000076833 844.32 6329.11 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
43. bhmt ENSDARG00000013430 844.32 6329.11 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
44. blcap ENSDARG00000052073 844.32 6329.11 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
45. c1galt1b ENSDARG00000055561, ENSDARG00000113870 844.32 6329.11 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
46. ccnd1 ENSDARG00000101637 844.32 6329.11 cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
47. cct6a ENSDARG00000021252 844.32 6329.11 chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
48. cfl1l ENSDARG00000012972 844.32 6329.11 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
49. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 844.32 6329.11 chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
50. ckma ENSDARG00000035327, ENSDARG00000114671 844.32 6329.11 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
51. cx43.4 ENSDARG00000007099 844.32 6329.11 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
52. echs1 ENSDARG00000001578 844.32 6329.11 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
53. fbxo18 ENSDARG00000062983, ENSDARG00000113423 844.32 6329.11 F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
54. fbxw11a ENSDARG00000104806 844.32 6329.11 F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
55. frem2a ENSDARG00000076856 844.32 6329.11 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
56. gabarapa ENSDARG00000035557, ENSDARG00000110690 844.32 6329.11 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
57. glrx3 ENSDARG00000098785 844.32 6329.11 glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
58. gnl3l ENSDARG00000020595, ENSDARG00000109309 844.32 6329.11 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
59. gstp1 ENSDARG00000104068 844.32 6329.11 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
60. h3f3d ENSDARG00000045248 844.32 6329.11 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
61. haus1 ENSDARG00000058968 844.32 6329.11 HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
62. hmgb1b ENSDARG00000030479 844.32 6329.11 high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
63. hmgn2 ENSDARG00000099572 844.32 6329.11 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
64. hnrpdl 844.32 6329.11 heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
65. hspa8 ENSDARG00000068992, ENSDARG00000114726 844.32 6329.11 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
66. iars2 ENSDARG00000044134 844.32 6329.11 isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
67. icn ENSDARG00000009978 844.32 6329.11 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
68. lasp1 ENSDARG00000057867 844.32 6329.11 LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
69. lgals1l1 ENSDARG00000088711 844.32 6329.11 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
70. lin54 ENSDARG00000063194 844.32 6329.11 lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
71. msna ENSDARG00000058128, ENSDARG00000114614 844.32 6329.11 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
72. msxd msxd 844.32 6329.11
73. mt-atp6 ENSDARG00000063911 844.32 6329.11 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
74. mt-nd3 ENSDARG00000063914 844.32 6329.11 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
75. mt-nd4 ENSDARG00000063917 844.32 6329.11 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
76. myhz1.3 ENSDARG00000067997 844.32 6329.11 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
77. myl10 ENSDARG00000062592 844.32 6329.11 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
78. mylz3 ENSDARG00000017441 844.32 6329.11 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
79. nccrp1 ENSDARG00000035326, ENSDARG00000113175 844.32 6329.11 non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
80. ndufa7 ENSDARG00000036684 844.32 6329.11 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
81. pfn2l ENSDARG00000012682 844.32 6329.11 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
82. pip5k2 pip5k2 844.32 6329.11
83. prkab1b ENSDARG00000046143 844.32 6329.11 protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
84. prps1a ENSDARG00000015524 844.32 6329.11 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
85. pvalb2 ENSDARG00000002768, ENSDARG00000114085 844.32 6329.11 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
86. rab14 ENSDARG00000074246 844.32 6329.11 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
87. rac1 rac1 844.32 6329.11
88. rbm24b ENSDARG00000031809, ENSDARG00000110167 844.32 6329.11 RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
89. rbm39a ENSDARG00000011613 844.32 6329.11 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
90. rhag ENSDARG00000019253 844.32 6329.11 Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
91. rnd1 rnd1 844.32 6329.11
92. rpl19 ENSDARG00000013307 844.32 6329.11 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
93. rpl22l1 ENSDARG00000010244 844.32 6329.11 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
94. rpl23a ENSDARG00000006316 844.32 6329.11 ribosomal protein L23a [Source:ZFIN;Acc:ZDB-GENE-030131-7479]
95. rpl24 ENSDARG00000099104 844.32 6329.11 ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
96. rpl36a ENSDARG00000058105, ENSDARG00000112656 844.32 6329.11 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
97. rplp0 ENSDARG00000051783 844.32 6329.11 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
98. rps14 ENSDARG00000036629 844.32 6329.11 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
99. rps20 ENSDARG00000036044 844.32 6329.11 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
100. rps26 ENSDARG00000037071 844.32 6329.11 ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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