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Experiment Zebrafish_40hpf_whole_embryo2, section s71.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 8505.52 63758.26 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 7311.76 54809.71
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 3879.71 29082.71 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. tmsb4x ENSDARG00000077777 1641.42 12304.26 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. eef2b ENSDARG00000100371, ENSDARG00000109247 1342.98 10067.12 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
6. mt-atp6 ENSDARG00000063911 1342.98 10067.12 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
7. mt-nd4 ENSDARG00000063917 1342.98 10067.12 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
8. CABZ01074130.1 ENSDARG00000105274 1193.76 8948.55
9. cfl1l ENSDARG00000012972 1193.76 8948.55 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
10. eef1a1l1 ENSDARG00000020850 1193.76 8948.55 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
11. actb2 ENSDARG00000037870 1044.54 7829.98 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. mt-co2 ENSDARG00000063908 1044.54 7829.98 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
13. zgc:92061 zgc:92061 1044.54 7829.98
14. actb1 ENSDARG00000037746, ENSDARG00000113649 895.32 6711.41 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
15. and3 ENSDARG00000056873 895.32 6711.41 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
16. mt-nd2 ENSDARG00000063899 895.32 6711.41 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
17. cfl1 ENSDARG00000021124 746.10 5592.84 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
18. gch2 ENSDARG00000099101 746.10 5592.84 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
19. AL954137.2 ENSDARG00000114408 596.88 4474.27
20. and1 ENSDARG00000088514 596.88 4474.27 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
21. hmgn2 ENSDARG00000099572 596.88 4474.27 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
22. icn ENSDARG00000009978 596.88 4474.27 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
23. marcksb ENSDARG00000008803 596.88 4474.27 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
24. mt-cyb ENSDARG00000063924 596.88 4474.27 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. pfn1 ENSDARG00000088091 596.88 4474.27 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
26. zgc:92533 zgc:92533 596.88 4474.27
27. ckmb ENSDARG00000040565 447.66 3355.71 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
28. col1a1b ENSDARG00000035809 447.66 3355.71 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
29. dad1 ENSDARG00000102105 447.66 3355.71 defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
30. efemp2a ENSDARG00000094324 447.66 3355.71 EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
31. h3f3d ENSDARG00000045248 447.66 3355.71 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
32. hbbe3 ENSDARG00000038147, ENSDARG00000109344 447.66 3355.71 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
33. im:7150988 ENSDARG00000109310 447.66 3355.71 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
34. khdrbs1a ENSDARG00000052856 447.66 3355.71 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
35. mt-co3 ENSDARG00000063912 447.66 3355.71 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
36. nr2f2 ENSDARG00000040926 447.66 3355.71 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
37. rbm4.3 ENSDARG00000022129 447.66 3355.71 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
38. rpl31 ENSDARG00000053365 447.66 3355.71 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
39. rpl8 ENSDARG00000014867 447.66 3355.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
40. rplp2 ENSDARG00000101406 447.66 3355.71 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
41. sepw1 447.66 3355.71 selenoprotein W, 1
42. SENP7 SENP7 298.44 2237.14
43. acta1a ENSDARG00000036371 298.44 2237.14 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
44. akap12b ENSDARG00000055678, ENSDARG00000110544 298.44 2237.14 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
45. and2 ENSDARG00000079302 298.44 2237.14 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
46. anxa1a ENSDARG00000026726 298.44 2237.14 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
47. anxa1c ENSDARG00000104359 298.44 2237.14 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
48. apoc1l apoc1l 298.44 2237.14
49. arpc4l ENSDARG00000058225 298.44 2237.14 actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
50. atf6 ENSDARG00000012656 298.44 2237.14 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
51. atp5g3b 298.44 2237.14 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
52. bcam ENSDARG00000090190 298.44 2237.14 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
53. casq2 ENSDARG00000008982 298.44 2237.14 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
54. cdc42ep4b ENSDARG00000045036 298.44 2237.14 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
55. ckma ENSDARG00000035327, ENSDARG00000114671 298.44 2237.14 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
56. cxcr4b ENSDARG00000041959 298.44 2237.14 chemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
57. cycsb ENSDARG00000044562 298.44 2237.14 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
58. eef1g ENSDARG00000056119 298.44 2237.14 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
59. eif5a ENSDARG00000017235 298.44 2237.14 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
60. esrp1 ENSDARG00000011245 298.44 2237.14 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
61. glrx ENSDARG00000028106 298.44 2237.14 glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
62. hbae3 ENSDARG00000079305 298.44 2237.14 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
63. hn1l hn1l 298.44 2237.14
64. hnrnpk ENSDARG00000018914 298.44 2237.14 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
65. hnrpdl 298.44 2237.14 heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
66. homer3 homer3 298.44 2237.14
67. hspa8 ENSDARG00000068992, ENSDARG00000114726 298.44 2237.14 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
68. klhdc4 ENSDARG00000100206, ENSDARG00000113735 298.44 2237.14 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
69. mt-co1 ENSDARG00000063905 298.44 2237.14 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
70. mt-nd1 ENSDARG00000063895 298.44 2237.14 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
71. myl1 ENSDARG00000014196 298.44 2237.14 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
72. mylpfb ENSDARG00000002589 298.44 2237.14 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
73. mylz3 ENSDARG00000017441 298.44 2237.14 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
74. nccrp1 ENSDARG00000035326, ENSDARG00000113175 298.44 2237.14 non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
75. ndufab1b ENSDARG00000014915 298.44 2237.14 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
76. otub1a ENSDARG00000055536 298.44 2237.14 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
77. pmp22a ENSDARG00000105223, ENSDARG00000115339 298.44 2237.14 peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
78. ppa1b ENSDARG00000030441 298.44 2237.14 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
79. ppiaa ENSDARG00000009212 298.44 2237.14 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
80. ppp2r2d ENSDARG00000102009 298.44 2237.14 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
81. ptmab ENSDARG00000101766 298.44 2237.14 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
82. rpl14 ENSDARG00000103433 298.44 2237.14 ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
83. rpl19 ENSDARG00000013307 298.44 2237.14 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
84. rpl35a ENSDARG00000088030 298.44 2237.14 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
85. rpl6 ENSDARG00000058451 298.44 2237.14 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
86. rpl9 ENSDARG00000037350, ENSDARG00000112384 298.44 2237.14 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
87. rps12 ENSDARG00000036875, ENSDARG00000115157 298.44 2237.14 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
88. rps15 ENSDARG00000070849, ENSDARG00000110979 298.44 2237.14 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
89. rps17 ENSDARG00000104011 298.44 2237.14 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
90. rps26l ENSDARG00000030408 298.44 2237.14 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
91. rps4x ENSDARG00000014690 298.44 2237.14 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
92. rps7 ENSDARG00000042566 298.44 2237.14 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
93. rps9 ENSDARG00000011405, ENSDARG00000113248 298.44 2237.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
94. scaf11 ENSDARG00000045885 298.44 2237.14 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
95. slc2a15a ENSDARG00000029894 298.44 2237.14 solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
96. sparc ENSDARG00000019353 298.44 2237.14 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
97. sra1 ENSDARG00000053619 298.44 2237.14 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
98. srebf2 ENSDARG00000063438 298.44 2237.14 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
99. tnnc2 ENSDARG00000070835, ENSDARG00000111155 298.44 2237.14 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
100. tpm2 ENSDARG00000104682 298.44 2237.14 tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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