Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo2, section s65.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 17275.13 129493.76
2. krt4 ENSDARG00000017624, ENSDARG00000115790 8349.65 62588.68 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 3694.96 27697.29 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. tmsb4x ENSDARG00000077777 2591.27 19424.07 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. actb1 ENSDARG00000037746, ENSDARG00000113649 1439.59 10791.12 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
6. actb2 ENSDARG00000037870 1151.68 8632.95 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. and1 ENSDARG00000088514 1151.68 8632.95 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
8. and2 ENSDARG00000079302 959.73 7194.10 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
9. mt-co2 ENSDARG00000063908 767.78 5755.25 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. CABZ01074130.1 ENSDARG00000105274 719.80 5395.60
11. eef1a1l1 ENSDARG00000020850 671.81 5035.86 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
12. cfl1l ENSDARG00000012972 623.82 4676.13 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
13. mt-nd4 ENSDARG00000063917 623.82 4676.13 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. icn ENSDARG00000009978 527.85 3956.74 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
15. im:7150988 ENSDARG00000109310 527.85 3956.74 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
16. rplp1 ENSDARG00000021864 479.86 3597.01 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
17. bcam ENSDARG00000090190 431.88 3237.36 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
18. id1 ENSDARG00000040764 431.88 3237.36 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
19. mt-atp6 ENSDARG00000063911 431.88 3237.36 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
20. mt-cyb ENSDARG00000063924 431.88 3237.36 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
21. rpl8 ENSDARG00000014867 431.88 3237.36 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
22. rps27a ENSDARG00000032725, ENSDARG00000114059 431.88 3237.36 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
23. si:dkey-151g10.6 si:dkey-151g10.6 431.88 3237.36
24. acta1a ENSDARG00000036371 383.89 2877.63 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
25. and3 ENSDARG00000056873 383.89 2877.63 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
26. cyt1l ENSDARG00000036832 383.89 2877.63 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
27. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 383.89 2877.63 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
28. ptmab ENSDARG00000101766 383.89 2877.63 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
29. s100a10b ENSDARG00000025254 383.89 2877.63 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
30. si:ch1073-429i10.3 383.89 2877.63 si:ch1073-429i10.3, transcript variant X2
31. zgc:165571 zgc:165571 383.89 2877.63
32. gch2 ENSDARG00000099101 335.91 2517.97 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
33. mt-nd2 ENSDARG00000063899 335.91 2517.97 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
34. ppiaa ENSDARG00000009212 335.91 2517.97 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
35. col1a1b ENSDARG00000035809 287.92 2158.24 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
36. col2a1a ENSDARG00000069093, ENSDARG00000111202 287.92 2158.24 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
37. eef2b ENSDARG00000100371, ENSDARG00000109247 287.92 2158.24 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
38. hmga1a ENSDARG00000028335 287.92 2158.24 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
39. hspa8 ENSDARG00000068992, ENSDARG00000114726 287.92 2158.24 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
40. krt8 ENSDARG00000058358, ENSDARG00000109279 287.92 2158.24 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
41. myh9a ENSDARG00000063295 287.92 2158.24 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
42. pfn1 ENSDARG00000088091 287.92 2158.24 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
43. rpl26 ENSDARG00000102317 287.92 2158.24 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
44. rps4x ENSDARG00000014690 287.92 2158.24 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
45. zgc:92533 zgc:92533 287.92 2158.24
46. btf3 ENSDARG00000035400, ENSDARG00000116462 239.93 1798.51 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
47. capns1b ENSDARG00000013804 239.93 1798.51 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
48. icn2 ENSDARG00000055514 239.93 1798.51 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
49. krt5 ENSDARG00000058371, ENSDARG00000112017 239.93 1798.51 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
50. pleca ENSDARG00000062590 239.93 1798.51 plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
51. ppiab ENSDARG00000103994 239.93 1798.51 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
52. rpl23 ENSDARG00000053457 239.93 1798.51 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
53. rpl28 ENSDARG00000005791 239.93 1798.51 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
54. rps20 ENSDARG00000036044 239.93 1798.51 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
55. tnc ENSDARG00000021948, ENSDARG00000113518 239.93 1798.51 tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
56. zgc:112425 zgc:112425 239.93 1798.51
57. AL954137.2 ENSDARG00000114408 191.95 1438.85
58. CABZ01080098.1 ENSDARG00000110680 191.95 1438.85
59. CABZ01092303.1 CABZ01092303.1 191.95 1438.85
60. ahnak ENSDARG00000061764 191.95 1438.85 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
61. apoc1l apoc1l 191.95 1438.85
62. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 191.95 1438.85 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
63. clta ENSDARG00000045618, ENSDARG00000115484 191.95 1438.85 clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
64. eef1g ENSDARG00000056119 191.95 1438.85 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
65. egln1 egln1 191.95 1438.85
66. eif4g2b ENSDARG00000057167 191.95 1438.85 eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
67. eif5a2 ENSDARG00000056186 191.95 1438.85 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
68. gnb2l1 191.95 1438.85 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
69. hdlbp hdlbp 191.95 1438.85
70. histh1l ENSDARG00000035519 191.95 1438.85 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
71. hmgn2 ENSDARG00000099572 191.95 1438.85 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
72. hnrnpab hnrnpab 191.95 1438.85
73. krt18 ENSDARG00000018404, ENSDARG00000109528 191.95 1438.85 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
74. mdka ENSDARG00000036036 191.95 1438.85 midkine a [Source:ZFIN;Acc:ZDB-GENE-990621-1]
75. mt-co1 ENSDARG00000063905 191.95 1438.85 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
76. mt-co3 ENSDARG00000063912 191.95 1438.85 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
77. mt-nd1 ENSDARG00000063895 191.95 1438.85 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
78. myl10 ENSDARG00000062592 191.95 1438.85 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
79. pabpc1a ENSDARG00000017219 191.95 1438.85 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
80. pcna ENSDARG00000054155 191.95 1438.85 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
81. prdx5 ENSDARG00000055064 191.95 1438.85 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
82. rpl18 ENSDARG00000029533 191.95 1438.85 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
83. rpl9 ENSDARG00000037350, ENSDARG00000112384 191.95 1438.85 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
84. rps12 ENSDARG00000036875, ENSDARG00000115157 191.95 1438.85 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
85. rps23 ENSDARG00000021838 191.95 1438.85 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
86. rps28 ENSDARG00000035860 191.95 1438.85 ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
87. rpsa ENSDARG00000019181 191.95 1438.85 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
88. si:dkey-150i13.2 ENSDARG00000071052 191.95 1438.85 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
89. si:dkeyp-86f7.3 si:dkeyp-86f7.3 191.95 1438.85
90. sparc ENSDARG00000019353 191.95 1438.85 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
91. zgc:113413 zgc:113413 191.95 1438.85
92. zgc:153129 zgc:153129 191.95 1438.85
93. ATP5B 143.96 1079.12 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
94. CABZ01038493.1 ENSDARG00000117625 143.96 1079.12
95. CCNA2 ENSDARG00000011094 143.96 1079.12 cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
96. FP067396.1 FP067396.1 143.96 1079.12
97. PRODH_1 PRODH_1 143.96 1079.12
98. UBC ENSDARG00000102632 143.96 1079.12 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
99. ahcy ENSDARG00000005191 143.96 1079.12 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
100. aldoaa ENSDARG00000011665 143.96 1079.12 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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