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Experiment Zebrafish_40hpf_whole_embryo2, section s24.

Sample reads: 133,389. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 27411.94 205503.51
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3817.40 28618.52 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 3158.37 23677.86 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2898.80 21731.90 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. ckmb ENSDARG00000040565 1787.46 13400.34 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. ckma ENSDARG00000035327, ENSDARG00000114671 1784.36 13377.10 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. mylz3 ENSDARG00000017441 1733.06 12992.51 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
8. apoa1b ENSDARG00000101324 1478.16 11081.56 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
9. apoc1l apoc1l 1442.41 10813.55
10. mt-co2 ENSDARG00000063908 1134.65 8506.31 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. atp2a1 ENSDARG00000020574 1077.14 8075.17 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
12. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1053.83 7900.42 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
13. apoa2 ENSDARG00000015866 1024.30 7679.03 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
14. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1000.98 7504.21 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
15. mt-nd2 ENSDARG00000063899 980.77 7352.70 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. tmsb4x ENSDARG00000077777 976.11 7317.76 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
17. acta1b ENSDARG00000055618 960.57 7201.26 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
18. mt-atp6 ENSDARG00000063911 859.54 6443.85 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
19. mt-nd4 ENSDARG00000063917 842.44 6315.66 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. pvalb1 ENSDARG00000037789 794.26 5954.46 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
21. actb2 ENSDARG00000037870 770.94 5779.63 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. mt-co3 ENSDARG00000063912 767.83 5756.31 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. actc1b ENSDARG00000099197 764.72 5733.00 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
24. apobb apobb 694.78 5208.67
25. apoeb ENSDARG00000040295 612.40 4591.08 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
26. tnnt3a ENSDARG00000030270 593.75 4451.26 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
27. apoa1a ENSDARG00000012076, ENSDARG00000110395 571.99 4288.13 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
28. mt-nd1 ENSDARG00000063895 511.37 3833.67 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
29. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 502.04 3763.72 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
30. mt-cyb ENSDARG00000063924 486.50 3647.22 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. tnnt3b ENSDARG00000068457 480.28 3600.59 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
32. bhmt ENSDARG00000013430 475.62 3565.66 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
33. si:dkey-151g10.6 si:dkey-151g10.6 474.07 3554.04
34. tnni2a.4 ENSDARG00000029069 474.07 3554.04 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
35. eef1a1l1 ENSDARG00000020850 467.85 3507.41 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
36. ttna ttna 456.97 3425.84
37. mylpfb ENSDARG00000002589 428.99 3216.08 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
38. zgc:161979_1 zgc:161979_1 413.45 3099.58
39. actb1 ENSDARG00000037746, ENSDARG00000113649 404.12 3029.63 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
40. acta1a ENSDARG00000036371 385.47 2889.82 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
41. ttnb ttnb 379.25 2843.18
42. myhz1.2 ENSDARG00000067995 374.59 2808.25 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
43. ppiaa ENSDARG00000009212 307.75 2307.16 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
44. rpl8 ENSDARG00000014867 306.20 2295.54 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. zgc:92533 zgc:92533 293.77 2202.35
46. AC024175.17 AC024175.17 284.44 2132.41
47. zgc:161979 zgc:161979 279.78 2097.47
48. si:ch211-226o13.2 275.11 2062.46 si:ch211-226o13.2
49. rpl18a ENSDARG00000025073 270.45 2027.53 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
50. nme2b.2 ENSDARG00000099420 253.35 1899.33 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
51. apoa4 apoa4 247.14 1852.77
52. myl1 ENSDARG00000014196 247.14 1852.77 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
53. sepp1a 234.70 1759.51 selenoprotein P, plasma, 1a
54. zgc:112425 zgc:112425 233.15 1747.89
55. ptmab ENSDARG00000101766 230.04 1724.58 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
56. rpl23 ENSDARG00000053457 228.48 1712.88 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
57. col1a1a ENSDARG00000012405, ENSDARG00000116113 223.82 1677.95 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
58. pkmb ENSDARG00000099860 223.82 1677.95 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
59. gapdh ENSDARG00000043457 216.05 1619.70 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
60. btf3 ENSDARG00000035400, ENSDARG00000116462 214.50 1608.08 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
61. cyt1l ENSDARG00000036832 203.62 1526.51 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
62. rpl26 ENSDARG00000102317 203.62 1526.51 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
63. hmga1a ENSDARG00000028335 202.06 1514.82 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
64. col1a1b ENSDARG00000035809 200.51 1503.20 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
65. myhz1.3 ENSDARG00000067997 200.51 1503.20 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
66. hspa8 ENSDARG00000068992, ENSDARG00000114726 198.95 1491.50 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
67. rpl10a ENSDARG00000042905, ENSDARG00000115649 189.63 1421.63 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
68. rpl11 ENSDARG00000043509 189.63 1421.63 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
69. rplp1 ENSDARG00000021864 186.52 1398.31 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
70. mt-co1 ENSDARG00000063905 183.41 1375.00 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
71. rps23 ENSDARG00000021838 183.41 1375.00 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
72. eef2b ENSDARG00000100371, ENSDARG00000109247 178.75 1340.06 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
73. icn ENSDARG00000009978 175.64 1316.75 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
74. rplp2 ENSDARG00000101406 175.64 1316.75 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
75. zgc:66286 zgc:66286 175.64 1316.75
76. pabpc1a ENSDARG00000017219 172.53 1293.43 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
77. apoc2 ENSDARG00000092155 170.97 1281.74 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
78. hbae3 ENSDARG00000079305 169.42 1270.12 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
79. si:dkey-150i13.2 ENSDARG00000071052 169.42 1270.12 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
80. rpsa ENSDARG00000019181 166.31 1246.80 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
81. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 164.76 1235.18 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
82. rpl19 ENSDARG00000013307 163.20 1223.49 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. rpl36a ENSDARG00000058105, ENSDARG00000112656 163.20 1223.49 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
84. rps20 ENSDARG00000036044 156.99 1176.93 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
85. fabp3 ENSDARG00000023290 155.43 1165.24 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
86. rpl21 ENSDARG00000010516, ENSDARG00000110263 155.43 1165.24 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
87. rps26l ENSDARG00000030408 155.43 1165.24 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
88. zgc:153129 zgc:153129 155.43 1165.24
89. aldoab ENSDARG00000034470 153.88 1153.62 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
90. col2a1a ENSDARG00000069093, ENSDARG00000111202 152.32 1141.92 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
91. cfl1l ENSDARG00000012972 150.77 1130.30 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
92. rps6 ENSDARG00000019778 150.77 1130.30 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
93. rpl9 ENSDARG00000037350, ENSDARG00000112384 149.21 1118.61 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
94. si:dkeyp-113d7.4 si:dkeyp-113d7.4 147.66 1106.99
95. tpm3 ENSDARG00000005162 147.66 1106.99 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
96. myl10 ENSDARG00000062592 146.11 1095.37 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
97. mt-nd3 ENSDARG00000063914 144.55 1083.67 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
98. rps14 ENSDARG00000036629 143.00 1072.05 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
99. ctsla ENSDARG00000007836 141.44 1060.36 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
100. rpl27 ENSDARG00000015128 139.89 1048.74 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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