Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s76.

Sample reads: 133,404. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 15475.64 116006.10 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 6838.07 51258.48
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 2759.22 20683.24 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. actb2 ENSDARG00000037870 2639.26 19784.01 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
5. and3 ENSDARG00000056873 1919.46 14388.36 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
6. actb1 ENSDARG00000037746, ENSDARG00000113649 1319.63 9892.01 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
7. eef1a1l1 ENSDARG00000020850 1319.63 9892.01 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
8. tmsb4x ENSDARG00000077777 1319.63 9892.01 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. and1 ENSDARG00000088514 1199.66 8992.71 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
10. zgc:92061 zgc:92061 1199.66 8992.71
11. and2 ENSDARG00000079302 1079.70 8093.48 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
12. zgc:92533 zgc:92533 1079.70 8093.48
13. cast ENSDARG00000058693 839.76 6294.88 calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
14. mt-co3 ENSDARG00000063912 839.76 6294.88 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. mt-nd2 ENSDARG00000063899 839.76 6294.88 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. mt-nd4 ENSDARG00000063917 839.76 6294.88 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. wu:fb17f05 wu:fb17f05 839.76 6294.88
18. CABZ01074130.1 ENSDARG00000105274 719.80 5395.65
19. krt8 ENSDARG00000058358, ENSDARG00000109279 719.80 5395.65 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
20. mt-co2 ENSDARG00000063908 599.83 4496.35 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. rps5 ENSDARG00000043453 599.83 4496.35 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
22. sparc ENSDARG00000019353 599.83 4496.35 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
23. zgc:153129 zgc:153129 599.83 4496.35
24. zgc:165571 zgc:165571 599.83 4496.35
25. apoc1l apoc1l 479.86 3597.05
26. col1a1b ENSDARG00000035809 479.86 3597.05 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
27. cyt1l ENSDARG00000036832 479.86 3597.05 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
28. gstp1 ENSDARG00000104068 479.86 3597.05 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
29. hdlbp hdlbp 479.86 3597.05
30. hmgn2 ENSDARG00000099572 479.86 3597.05 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
31. im:7150988 ENSDARG00000109310 479.86 3597.05 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
32. ppib ENSDARG00000092798 479.86 3597.05 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
33. rnaseka ENSDARG00000069461 479.86 3597.05 ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
34. rpl18 ENSDARG00000029533 479.86 3597.05 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
35. rps2 ENSDARG00000077291 479.86 3597.05 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
36. si:dkeyp-51b9.3 ENSDARG00000092379 479.86 3597.05 si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
37. zgc:113019 ENSDARG00000099743 479.86 3597.05 zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
38. BX649554.3_1 BX649554.3_1 359.90 2697.83
39. RPL37A RPL37A 359.90 2697.83
40. acy3.2 ENSDARG00000005525 359.90 2697.83 aspartoacylase (aminocyclase) 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040718-37]
41. angptl7 ENSDARG00000027582, ENSDARG00000110344 359.90 2697.83 angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
42. arpc5a ENSDARG00000039142 359.90 2697.83 actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
43. atp5g3b 359.90 2697.83 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
44. atp5l ENSDARG00000011841 359.90 2697.83 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [Source:ZFIN;Acc:ZDB-GENE-030131-5177]
45. cav3 ENSDARG00000024141 359.90 2697.83 caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
46. chac1 ENSDARG00000070426 359.90 2697.83 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
47. eif5a ENSDARG00000017235 359.90 2697.83 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
48. hmga1a ENSDARG00000028335 359.90 2697.83 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
49. hsp90ab1 ENSDARG00000029150 359.90 2697.83 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
50. icn2 ENSDARG00000055514 359.90 2697.83 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
51. myl10 ENSDARG00000062592 359.90 2697.83 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
52. ndrg2 ENSDARG00000011170 359.90 2697.83 NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
53. pcna ENSDARG00000054155 359.90 2697.83 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
54. pfn1 ENSDARG00000088091 359.90 2697.83 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
55. ptmab ENSDARG00000101766 359.90 2697.83 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
56. rpl23 ENSDARG00000053457 359.90 2697.83 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
57. rpl26 ENSDARG00000102317 359.90 2697.83 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. rpl36 ENSDARG00000100588 359.90 2697.83 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
59. rpl5b ENSDARG00000015862, ENSDARG00000109661 359.90 2697.83 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
60. rplp0 ENSDARG00000051783 359.90 2697.83 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
61. rps26l ENSDARG00000030408 359.90 2697.83 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
62. si:ch211-105c13.3 ENSDARG00000089441 359.90 2697.83 si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
63. si:dkey-151g10.6 si:dkey-151g10.6 359.90 2697.83
64. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 359.90 2697.83 transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
65. ube2a ENSDARG00000098466 359.90 2697.83 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
66. zgc:112425 zgc:112425 359.90 2697.83
67. BX511086.1 BX511086.1 239.93 1798.53
68. C17H15orf57 C17H15orf57 239.93 1798.53
69. NUMA1_2 NUMA1_2 239.93 1798.53
70. RIN3 ENSDARG00000077618 239.93 1798.53 Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
71. SSBP4 ENSDARG00000056483 239.93 1798.53 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
72. aldh7a1 ENSDARG00000018426 239.93 1798.53 aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
73. aldoaa ENSDARG00000011665 239.93 1798.53 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
74. ammecr1 ENSDARG00000012892 239.93 1798.53 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
75. anxa1c ENSDARG00000104359 239.93 1798.53 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
76. anxa5b ENSDARG00000016470 239.93 1798.53 annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
77. apoeb ENSDARG00000040295 239.93 1798.53 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
78. arf5 ENSDARG00000070472, ENSDARG00000115687 239.93 1798.53 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
79. arpc1a ENSDARG00000008383 239.93 1798.53 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
80. atp5g1 239.93 1798.53 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
81. atp6v1h ENSDARG00000006370 239.93 1798.53 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
82. btf3 ENSDARG00000035400, ENSDARG00000116462 239.93 1798.53 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
83. cahz ENSDARG00000011166 239.93 1798.53 carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
84. caspb ENSDARG00000052039 239.93 1798.53 caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
85. chmp2bb ENSDARG00000002190 239.93 1798.53 charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
86. cirbp cirbp 239.93 1798.53
87. ckma ENSDARG00000035327, ENSDARG00000114671 239.93 1798.53 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
88. clic1 ENSDARG00000103340 239.93 1798.53 chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
89. col18a1 col18a1 239.93 1798.53
90. cox8a ENSDARG00000095273 239.93 1798.53 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
91. csrp1a ENSDARG00000006603 239.93 1798.53 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
92. cxxc1l cxxc1l 239.93 1798.53
93. eif3f ENSDARG00000077533 239.93 1798.53 eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2]
94. eif4g2a ENSDARG00000020377, ENSDARG00000112658 239.93 1798.53 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
95. epc1 epc1 239.93 1798.53
96. faua ENSDARG00000099022 239.93 1798.53 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
97. flna ENSDARG00000074201 239.93 1798.53 filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
98. frem2a ENSDARG00000076856 239.93 1798.53 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
99. gpx4b ENSDARG00000076836 239.93 1798.53 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
100. hoxd13a ENSDARG00000059256 239.93 1798.53 homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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