Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s74.

Sample reads: 133,407. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19771.36 148202.78
2. krt4 ENSDARG00000017624, ENSDARG00000115790 9036.36 67735.03 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. col1a1a ENSDARG00000012405, ENSDARG00000116113 4463.86 33460.34 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
4. tmsb4x ENSDARG00000077777 3812.06 28574.56 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. im:7150988 ENSDARG00000109310 2251.68 16878.21 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
6. and1 ENSDARG00000088514 1955.41 14657.42 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
7. actb2 ENSDARG00000037870 1698.64 12732.72 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
8. actb1 ENSDARG00000037746, ENSDARG00000113649 1550.50 11622.29 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
9. and3 ENSDARG00000056873 1550.50 11622.29 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
10. icn ENSDARG00000009978 1313.48 9845.62 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
11. cfl1l ENSDARG00000012972 1244.35 9327.44 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
12. CABZ01074130.1 ENSDARG00000105274 1066.59 7994.98
13. eef1a1l1 ENSDARG00000020850 908.57 6810.49 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. icn2 ENSDARG00000055514 819.69 6144.26 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
15. zgc:92533 zgc:92533 720.93 5403.97
16. pfn1 ENSDARG00000088091 711.06 5329.99 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
17. and2 ENSDARG00000079302 651.80 4885.78 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
18. mt-co2 ENSDARG00000063908 641.93 4811.80 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. wu:fb17f05 wu:fb17f05 641.93 4811.80
20. krt8 ENSDARG00000058358, ENSDARG00000109279 622.18 4663.76 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
21. zgc:92061 zgc:92061 503.67 3775.43
22. cyt1l ENSDARG00000036832 483.91 3627.31 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
23. rpl10a ENSDARG00000042905, ENSDARG00000115649 454.29 3405.28 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
24. FP067396.1 FP067396.1 444.41 3331.22
25. apoeb ENSDARG00000040295 434.54 3257.24 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
26. mt-co3 ENSDARG00000063912 434.54 3257.24 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
27. sparc ENSDARG00000019353 424.66 3183.18 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
28. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 424.66 3183.18 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
29. frem2a ENSDARG00000076856 414.78 3109.12 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
30. s100a10b ENSDARG00000025254 395.03 2961.08 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
31. mt-nd2 ENSDARG00000063899 385.16 2887.09 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
32. zgc:153129 zgc:153129 375.28 2813.04
33. mt-atp6 ENSDARG00000063911 355.53 2664.99 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
34. bcam ENSDARG00000090190 345.65 2590.93 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
35. rpl21 ENSDARG00000010516, ENSDARG00000110263 345.65 2590.93 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
36. mt-nd4 ENSDARG00000063917 325.90 2442.89 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
37. ogn 325.90 2442.89 osteoglycin
38. sepw1 325.90 2442.89 selenoprotein W, 1
39. mt-cyb ENSDARG00000063924 316.03 2368.91 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
40. rpl23 ENSDARG00000053457 316.03 2368.91 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
41. si:dkey-151g10.6 si:dkey-151g10.6 316.03 2368.91
42. capns1b ENSDARG00000013804 306.15 2294.85 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
43. rps26l ENSDARG00000030408 306.15 2294.85 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
44. chac1 ENSDARG00000070426 296.27 2220.79 ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
45. rps23 ENSDARG00000021838 296.27 2220.79 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
46. hspa8 ENSDARG00000068992, ENSDARG00000114726 286.40 2146.81 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
47. fth1a ENSDARG00000015551 276.52 2072.75 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
48. id1 ENSDARG00000040764 276.52 2072.75 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
49. ptmab ENSDARG00000101766 266.65 1998.76 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
50. rplp1 ENSDARG00000021864 266.65 1998.76 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
51. rplp2 ENSDARG00000101406 266.65 1998.76 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
52. myl12.1 ENSDARG00000099766 256.77 1924.70 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
53. rpl18 ENSDARG00000029533 256.77 1924.70 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
54. rpl8 ENSDARG00000014867 256.77 1924.70 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
55. mt-co1 ENSDARG00000063905 246.90 1850.72 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. eef2b ENSDARG00000100371, ENSDARG00000109247 237.02 1776.66 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
57. rpl26 ENSDARG00000102317 237.02 1776.66 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. rps9 ENSDARG00000011405, ENSDARG00000113248 237.02 1776.66 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
59. rpl18a ENSDARG00000025073 227.14 1702.60 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 227.14 1702.60 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. rps12 ENSDARG00000036875, ENSDARG00000115157 227.14 1702.60 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
62. serpinh1b ENSDARG00000019949 227.14 1702.60 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
63. cldni ENSDARG00000054616, ENSDARG00000111133 217.27 1628.62 claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
64. eif5a ENSDARG00000017235 217.27 1628.62 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
65. rps27.1 ENSDARG00000023298 217.27 1628.62 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
66. rps5 ENSDARG00000043453 217.27 1628.62 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
67. rpl7 ENSDARG00000007320 207.39 1554.56 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
68. rps18 ENSDARG00000100392 207.39 1554.56 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
69. rps27a ENSDARG00000032725, ENSDARG00000114059 207.39 1554.56 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
70. col18a1 col18a1 197.52 1480.58
71. rps14 ENSDARG00000036629 197.52 1480.58 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. rps20 ENSDARG00000036044 197.52 1480.58 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
73. CU914813.1 CU914813.1 187.64 1406.52
74. MAL 187.64 1406.52 mal, T-cell differentiation protein
75. angptl7 ENSDARG00000027582, ENSDARG00000110344 187.64 1406.52 angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
76. arpc2 ENSDARG00000075989 187.64 1406.52 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
77. faua ENSDARG00000099022 187.64 1406.52 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
78. hmga1a ENSDARG00000028335 187.64 1406.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
79. ppiaa ENSDARG00000009212 187.64 1406.52 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
80. ppiab ENSDARG00000103994 187.64 1406.52 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
81. rpl19 ENSDARG00000013307 187.64 1406.52 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
82. si:dkeyp-86f7.3 si:dkeyp-86f7.3 187.64 1406.52
83. ywhabl ENSDARG00000040287 187.64 1406.52 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
84. zgc:112425 zgc:112425 187.64 1406.52
85. zgc:165571 zgc:165571 187.64 1406.52
86. arl4ca ENSDARG00000057606 177.76 1332.46 ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
87. mt-nd1 ENSDARG00000063895 177.76 1332.46 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
88. myh9a ENSDARG00000063295 177.76 1332.46 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
89. rpl11 ENSDARG00000043509 177.76 1332.46 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
90. rpl9 ENSDARG00000037350, ENSDARG00000112384 177.76 1332.46 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
91. rps24 ENSDARG00000039347 177.76 1332.46 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
92. rpsa ENSDARG00000019181 177.76 1332.46 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
93. tpm3 ENSDARG00000005162 177.76 1332.46 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
94. bambib ENSDARG00000099677 167.89 1258.48 BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
95. btf3 ENSDARG00000035400, ENSDARG00000116462 167.89 1258.48 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
96. fkbp1aa ENSDARG00000022684 167.89 1258.48 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
97. ppl ENSDARG00000101043 167.89 1258.48 periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
98. rps15 ENSDARG00000070849, ENSDARG00000110979 167.89 1258.48 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
99. tnc ENSDARG00000021948, ENSDARG00000113518 167.89 1258.48 tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
100. NID1 NID1 158.01 1184.42
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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