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Experiment Zebrafish_40hpf_whole_embryo1, section s67.

Sample reads: 133,398. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 23730.45 177891.79
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7420.50 55626.68 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tmsb4x ENSDARG00000077777 1696.11 12714.64 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. actb1 ENSDARG00000037746, ENSDARG00000113649 1241.80 9308.97 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
5. actb2 ENSDARG00000037870 1150.93 8627.78 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. mt-co2 ENSDARG00000063908 1044.93 7833.16 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
7. tpma ENSDARG00000033683 893.49 6697.91 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. si:dkey-151g10.6 si:dkey-151g10.6 878.34 6584.35
9. eef1a1l1 ENSDARG00000020850 742.05 5562.67 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. zgc:92533 zgc:92533 726.91 5449.17
11. ckmb ENSDARG00000040565 711.76 5335.60 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
12. mt-co3 ENSDARG00000063912 711.76 5335.60 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
13. cfl1l ENSDARG00000012972 666.33 4995.04 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
14. mt-atp6 ENSDARG00000063911 636.04 4767.98 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
15. mt-nd2 ENSDARG00000063899 605.75 4540.91 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
16. col1a1a ENSDARG00000012405, ENSDARG00000116113 530.04 3973.37 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
17. hmga1a ENSDARG00000028335 484.60 3632.73 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
18. mt-nd4 ENSDARG00000063917 484.60 3632.73 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
19. myl10 ENSDARG00000062592 484.60 3632.73 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
20. mt-cyb ENSDARG00000063924 469.46 3519.24 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
21. ckma ENSDARG00000035327, ENSDARG00000114671 454.32 3405.74 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
22. cyt1l ENSDARG00000036832 454.32 3405.74 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
23. ptmab ENSDARG00000101766 454.32 3405.74 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
24. rpl23 ENSDARG00000053457 454.32 3405.74 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
25. rplp2 ENSDARG00000101406 439.17 3292.17 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
26. btf3 ENSDARG00000035400, ENSDARG00000116462 424.03 3178.68 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
27. rpl10a ENSDARG00000042905, ENSDARG00000115649 424.03 3178.68 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
28. tnnc2 ENSDARG00000070835, ENSDARG00000111155 424.03 3178.68 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
29. zgc:66286 zgc:66286 408.88 3065.11
30. ppiaa ENSDARG00000009212 393.74 2951.61 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
31. zgc:112425 zgc:112425 393.74 2951.61
32. hspa8 ENSDARG00000068992, ENSDARG00000114726 378.60 2838.12 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
33. rpl9 ENSDARG00000037350, ENSDARG00000112384 378.60 2838.12 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
34. rps27a ENSDARG00000032725, ENSDARG00000114059 378.60 2838.12 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
35. actc1b ENSDARG00000099197 363.45 2724.55 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
36. rplp1 ENSDARG00000021864 363.45 2724.55 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
37. hbae3 ENSDARG00000079305 348.31 2611.05 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
38. rpl18a ENSDARG00000025073 348.31 2611.05 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
39. rps23 ENSDARG00000021838 348.31 2611.05 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
40. rpl8 ENSDARG00000014867 333.17 2497.56 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
41. rps9 ENSDARG00000011405, ENSDARG00000113248 333.17 2497.56 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
42. eef2b ENSDARG00000100371, ENSDARG00000109247 318.02 2383.99 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
43. pfn1 ENSDARG00000088091 318.02 2383.99 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
44. rpl7 ENSDARG00000007320 318.02 2383.99 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
45. si:ch1073-429i10.3 318.02 2383.99 si:ch1073-429i10.3, transcript variant X2
46. col1a1b ENSDARG00000035809 302.88 2270.49 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
47. id1 ENSDARG00000040764 302.88 2270.49 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
48. rpl27 ENSDARG00000015128 302.88 2270.49 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
49. tpm3 ENSDARG00000005162 302.88 2270.49 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
50. fkbp1aa ENSDARG00000022684 287.73 2156.93 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
51. hmgn2 ENSDARG00000099572 287.73 2156.93 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
52. icn ENSDARG00000009978 287.73 2156.93 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
53. krt8 ENSDARG00000058358, ENSDARG00000109279 287.73 2156.93 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
54. acta1a ENSDARG00000036371 272.59 2043.43 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
55. rpl36a ENSDARG00000058105, ENSDARG00000112656 272.59 2043.43 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
56. rps12 ENSDARG00000036875, ENSDARG00000115157 272.59 2043.43 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
57. eif5a ENSDARG00000017235 257.45 1929.94 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
58. mt-nd1 ENSDARG00000063895 257.45 1929.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
59. myhz2 ENSDARG00000012944 257.45 1929.94 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
60. rpl36 ENSDARG00000100588 257.45 1929.94 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
61. rpl6 ENSDARG00000058451 257.45 1929.94 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
62. rps2 ENSDARG00000077291 257.45 1929.94 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
63. rps27.1 ENSDARG00000023298 257.45 1929.94 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
64. si:dkeyp-86f7.3 si:dkeyp-86f7.3 257.45 1929.94
65. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 257.45 1929.94 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
66. gch2 ENSDARG00000099101 242.30 1816.37 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
67. hbbe1.1 ENSDARG00000113599 242.30 1816.37 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
68. mt-co1 ENSDARG00000063905 242.30 1816.37 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
69. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 242.30 1816.37 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
70. mylz3 ENSDARG00000017441 242.30 1816.37 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
71. rpl11 ENSDARG00000043509 242.30 1816.37 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. rpl18 ENSDARG00000029533 242.30 1816.37 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
73. rpl21 ENSDARG00000010516, ENSDARG00000110263 242.30 1816.37 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
74. rpl26 ENSDARG00000102317 242.30 1816.37 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
75. atp2a1 ENSDARG00000020574 227.16 1702.87 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
76. cirbp cirbp 227.16 1702.87
77. rpl19 ENSDARG00000013307 227.16 1702.87 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
78. rps14 ENSDARG00000036629 227.16 1702.87 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
79. rps15a ENSDARG00000010160 227.16 1702.87 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
80. rps26l ENSDARG00000030408 227.16 1702.87 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
81. tnnt3a ENSDARG00000030270 227.16 1702.87 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
82. ttna ttna 227.16 1702.87
83. zgc:113413 zgc:113413 227.16 1702.87
84. aldoab ENSDARG00000034470 212.01 1589.30 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
85. and2 ENSDARG00000079302 212.01 1589.30 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
86. and3 ENSDARG00000056873 212.01 1589.30 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
87. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 212.01 1589.30 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
88. myl12.1 ENSDARG00000099766 212.01 1589.30 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
89. rps20 ENSDARG00000036044 212.01 1589.30 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
90. zgc:165571 zgc:165571 212.01 1589.30
91. col11a1a ENSDARG00000026165, ENSDARG00000115341 196.87 1475.81 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
92. rps26 ENSDARG00000037071 196.87 1475.81 ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
93. rpsa ENSDARG00000019181 196.87 1475.81 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
94. s100a10b ENSDARG00000025254 196.87 1475.81 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
95. sparc ENSDARG00000019353 196.87 1475.81 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
96. AL954137.2 ENSDARG00000114408 181.73 1362.31
97. ATP5B 181.73 1362.31 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
98. calm2a ENSDARG00000031427, ENSDARG00000111871 181.73 1362.31 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
99. cd81 cd81 181.73 1362.31
100. cfl1 ENSDARG00000021124 181.73 1362.31 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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