Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s65.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 12161.68 91164.85
2. krt4 ENSDARG00000017624, ENSDARG00000115790 10030.25 75187.49 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. actb1 ENSDARG00000037746, ENSDARG00000113649 1880.67 14097.64 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
4. tmsb4x ENSDARG00000077777 1755.29 13157.78 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. mt-nd2 ENSDARG00000063899 1504.54 11278.14 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. tpma ENSDARG00000033683 1379.16 10338.29 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
7. ckmb ENSDARG00000040565 1253.78 9398.43 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. actc1b ENSDARG00000099197 1128.40 8458.57 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. mt-nd4 ENSDARG00000063917 1128.40 8458.57 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1003.03 7518.79 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. zgc:92533 zgc:92533 1003.03 7518.79
12. hmga1a ENSDARG00000028335 877.65 6578.93 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
13. mt-co3 ENSDARG00000063912 877.65 6578.93 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
14. myhz2 ENSDARG00000012944 877.65 6578.93 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
15. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 877.65 6578.93 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
16. apoc1l apoc1l 752.27 5639.07
17. cyt1l ENSDARG00000036832 752.27 5639.07 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
18. rpl36 ENSDARG00000100588 752.27 5639.07 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
19. eef1a1l1 ENSDARG00000020850 626.89 4699.21 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
20. id1 ENSDARG00000040764 626.89 4699.21 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
21. mt-atp6 ENSDARG00000063911 626.89 4699.21 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
22. mt-cyb ENSDARG00000063924 626.89 4699.21 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
23. rpl35 ENSDARG00000018334 626.89 4699.21 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
24. rpl8 ENSDARG00000014867 626.89 4699.21 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
25. acta1a ENSDARG00000036371 501.51 3759.36 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
26. bcam ENSDARG00000090190 501.51 3759.36 basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
27. cast ENSDARG00000058693 501.51 3759.36 calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
28. cfl1l ENSDARG00000012972 501.51 3759.36 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
29. im:7150988 ENSDARG00000109310 501.51 3759.36 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
30. pfn1 ENSDARG00000088091 501.51 3759.36 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
31. rpl5b ENSDARG00000015862, ENSDARG00000109661 501.51 3759.36 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
32. rplp0 ENSDARG00000051783 501.51 3759.36 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
33. rplp1 ENSDARG00000021864 501.51 3759.36 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
34. rps15 ENSDARG00000070849, ENSDARG00000110979 501.51 3759.36 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
35. rps27a ENSDARG00000032725, ENSDARG00000114059 501.51 3759.36 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
36. rps4x ENSDARG00000014690 501.51 3759.36 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
37. slc35f6 ENSDARG00000016745, ENSDARG00000114790 501.51 3759.36 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
38. tnnc2 ENSDARG00000070835, ENSDARG00000111155 501.51 3759.36 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
39. zgc:66286 zgc:66286 501.51 3759.36
40. zgc:92061 zgc:92061 501.51 3759.36
41. BX511252.1 BX511252.1 376.13 2819.50
42. RPL29 ENSDARG00000077717 376.13 2819.50 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
43. actn3a ENSDARG00000013755, ENSDARG00000111128 376.13 2819.50 actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
44. and1 ENSDARG00000088514 376.13 2819.50 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
45. and2 ENSDARG00000079302 376.13 2819.50 actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
46. and3 ENSDARG00000056873 376.13 2819.50 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
47. atp2a1 ENSDARG00000020574 376.13 2819.50 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
48. cirbp cirbp 376.13 2819.50
49. col1a1a ENSDARG00000012405, ENSDARG00000116113 376.13 2819.50 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
50. eef2b ENSDARG00000100371, ENSDARG00000109247 376.13 2819.50 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
51. eno3 ENSDARG00000039007 376.13 2819.50 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
52. hbbe1.1 ENSDARG00000113599 376.13 2819.50 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
53. larp4b ENSDARG00000062146 376.13 2819.50 La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
54. lbr ENSDARG00000014013 376.13 2819.50 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
55. marcksb ENSDARG00000008803 376.13 2819.50 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
56. mt-co2 ENSDARG00000063908 376.13 2819.50 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
57. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 376.13 2819.50 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
58. myl1 ENSDARG00000014196 376.13 2819.50 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
59. myl10 ENSDARG00000062592 376.13 2819.50 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
60. pleca ENSDARG00000062590 376.13 2819.50 plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
61. ppiaa ENSDARG00000009212 376.13 2819.50 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
62. ptmab ENSDARG00000101766 376.13 2819.50 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
63. puf60a ENSDARG00000032175 376.13 2819.50 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
64. rpl18 ENSDARG00000029533 376.13 2819.50 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
65. rpl23 ENSDARG00000053457 376.13 2819.50 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
66. rpl7 ENSDARG00000007320 376.13 2819.50 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
67. rps15a ENSDARG00000010160 376.13 2819.50 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
68. rps26l ENSDARG00000030408 376.13 2819.50 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
69. rsl24d1 ENSDARG00000040439 376.13 2819.50 ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
70. sept9a ENSDARG00000020235 376.13 2819.50 septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
71. si:ch211-226o13.2 376.13 2819.50 si:ch211-226o13.2
72. si:dkey-150i13.2 ENSDARG00000071052 376.13 2819.50 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
73. si:dkey-151g10.6 si:dkey-151g10.6 376.13 2819.50
74. smarca5 ENSDARG00000052348 376.13 2819.50 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
75. tuba8l ENSDARG00000042708 376.13 2819.50 tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
76. AL954137.2 ENSDARG00000114408 250.76 1879.72
77. CABZ01074130.1 ENSDARG00000105274 250.76 1879.72
78. GNAL ENSDARG00000045415 250.76 1879.72 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
79. KRT78 KRT78 250.76 1879.72
80. ZBTB16 ZBTB16 250.76 1879.72
81. actb2 ENSDARG00000037870 250.76 1879.72 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
82. actn3b ENSDARG00000001431 250.76 1879.72 actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
83. adpgk2 ENSDARG00000062785 250.76 1879.72 ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
84. aldoab ENSDARG00000034470 250.76 1879.72 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
85. ap4b1 ENSDARG00000013726 250.76 1879.72 adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
86. apoeb ENSDARG00000040295 250.76 1879.72 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
87. atp5g1 250.76 1879.72 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
88. atp5g3b 250.76 1879.72 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
89. bri3 ENSDARG00000086332 250.76 1879.72 brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
90. btbd10b ENSDARG00000020252 250.76 1879.72 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
91. cd164 ENSDARG00000013628 250.76 1879.72 CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
92. cnbpb ENSDARG00000070922 250.76 1879.72 CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
93. col1a2 ENSDARG00000020007 250.76 1879.72 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
94. col2a1a ENSDARG00000069093, ENSDARG00000111202 250.76 1879.72 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
95. cotl1 ENSDARG00000026829 250.76 1879.72 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
96. cox8a ENSDARG00000095273 250.76 1879.72 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
97. creb1a ENSDARG00000053586 250.76 1879.72 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
98. cyc1 ENSDARG00000038075 250.76 1879.72 cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
99. dpysl3 ENSDARG00000002587 250.76 1879.72 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
100. edf1 ENSDARG00000009950 250.76 1879.72 endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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