Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s51.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 25028.24 187600.69
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2766.55 20736.84 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2521.13 18897.28 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 1888.73 14157.09 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-co2 ENSDARG00000063908 1701.78 12755.80 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. ckma ENSDARG00000035327, ENSDARG00000114671 1651.78 12381.02 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. si:dkey-151g10.6 si:dkey-151g10.6 1241.72 9307.39
8. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1163.25 8719.21 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
9. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1146.32 8592.31 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
10. mt-co3 ENSDARG00000063912 1126.32 8442.40 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
11. tmsb4x ENSDARG00000077777 1123.24 8419.31 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
12. mylz3 ENSDARG00000017441 1094.77 8205.92 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
13. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1068.62 8009.91 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
14. actc1b ENSDARG00000099197 1060.92 7952.19 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
15. acta1b ENSDARG00000055618 1020.92 7652.37 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
16. mt-nd4 ENSDARG00000063917 851.66 6383.67 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. mt-atp6 ENSDARG00000063911 833.20 6245.30 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
18. tnni2a.4 ENSDARG00000029069 817.04 6124.17 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
19. mt-nd2 ENSDARG00000063899 775.50 5812.81 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
20. atp2a1 ENSDARG00000020574 773.96 5801.26 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
21. actb2 ENSDARG00000037870 763.96 5726.31 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. hbae3 ENSDARG00000079305 749.34 5616.72 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
23. myhz1.3 ENSDARG00000067997 717.80 5380.31 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
24. eef1a1l1 ENSDARG00000020850 698.56 5236.10 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. apoc1l apoc1l 665.48 4988.15
26. rpl23 ENSDARG00000053457 647.79 4855.55 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
27. hbbe3 ENSDARG00000038147, ENSDARG00000109344 607.01 4549.88 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
28. mt-cyb ENSDARG00000063924 603.93 4526.79 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
29. tnnt3a ENSDARG00000030270 570.85 4278.84 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
30. rpl10a ENSDARG00000042905, ENSDARG00000115649 523.15 3921.30 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
31. myl1 ENSDARG00000014196 517.77 3880.98 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
32. mt-nd1 ENSDARG00000063895 503.92 3777.16 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
33. ppiaa ENSDARG00000009212 490.84 3679.12 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
34. apoa2 ENSDARG00000015866 486.99 3650.26 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
35. acta1a ENSDARG00000036371 486.22 3644.49 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
36. hbbe1.1 ENSDARG00000113599 476.99 3575.31 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
37. rpl36a ENSDARG00000058105, ENSDARG00000112656 410.83 3079.40 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
38. actb1 ENSDARG00000037746, ENSDARG00000113649 398.52 2987.13 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
39. aldoab ENSDARG00000034470 391.60 2935.26 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
40. rplp1 ENSDARG00000021864 390.06 2923.72 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
41. rpl11 ENSDARG00000043509 388.52 2912.18 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
42. myl10 ENSDARG00000062592 358.51 2687.23 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
43. rps12 ENSDARG00000036875, ENSDARG00000115157 353.90 2652.68 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
44. zgc:161979_1 zgc:161979_1 352.36 2641.14
45. rps20 ENSDARG00000036044 350.82 2629.59 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
46. rps9 ENSDARG00000011405, ENSDARG00000113248 348.51 2612.28 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
47. apoeb ENSDARG00000040295 346.20 2594.96 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
48. tnnt3b ENSDARG00000068457 342.36 2566.18 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
49. rpl8 ENSDARG00000014867 336.97 2525.78 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
50. myhz2 ENSDARG00000012944 335.43 2514.24 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
51. rplp2 ENSDARG00000101406 333.13 2497.00 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
52. rpl21 ENSDARG00000010516, ENSDARG00000110263 331.59 2485.45 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
53. btf3 ENSDARG00000035400, ENSDARG00000116462 330.82 2479.68 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
54. rps23 ENSDARG00000021838 328.51 2462.37 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
55. zgc:92533 zgc:92533 327.74 2456.60
56. rpl9 ENSDARG00000037350, ENSDARG00000112384 320.82 2404.73 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
57. rps5 ENSDARG00000043453 320.82 2404.73 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
58. rpl19 ENSDARG00000013307 316.97 2375.87 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
59. rpl26 ENSDARG00000102317 315.43 2364.32 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
60. rpl27 ENSDARG00000015128 310.04 2323.92 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
61. pvalb1 ENSDARG00000037789 296.97 2225.96 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 296.20 2220.19 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. apoa1b ENSDARG00000101324 293.89 2202.87 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
64. zgc:112425 zgc:112425 293.12 2197.10
65. mylpfb ENSDARG00000002589 284.66 2133.69 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
66. rpl36 ENSDARG00000100588 284.66 2133.69 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
67. rps26l ENSDARG00000030408 283.89 2127.91 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
68. zgc:66286 zgc:66286 281.58 2110.60
69. rpl18 ENSDARG00000029533 280.81 2104.83 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
70. rpl18a ENSDARG00000025073 280.81 2104.83 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
71. hbae1_1 280.04 2099.06 hemoglobin, alpha embryonic 1
72. rps15 ENSDARG00000070849, ENSDARG00000110979 280.04 2099.06 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
73. icn ENSDARG00000009978 271.58 2035.64 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
74. mt-co1 ENSDARG00000063905 271.58 2035.64 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
75. rpl7 ENSDARG00000007320 270.04 2024.10 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
76. hmga1a ENSDARG00000028335 268.50 2012.56 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
77. hspa8 ENSDARG00000068992, ENSDARG00000114726 260.04 1949.15 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
78. si:ch211-226o13.2 259.27 1943.37 si:ch211-226o13.2
79. rps15a ENSDARG00000010160 254.65 1908.74 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
80. hbbe1.1_1 ENSDARG00000113599 242.34 1816.47 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
81. nme2b.2 ENSDARG00000099420 242.34 1816.47 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
82. pfn1 ENSDARG00000088091 242.34 1816.47 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
83. fkbp1aa ENSDARG00000022684 241.57 1810.70 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
84. gapdh ENSDARG00000043457 240.03 1799.16 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
85. rps19 ENSDARG00000030602 237.73 1781.92 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
86. rps2 ENSDARG00000077291 236.96 1776.15 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
87. zgc:161979 zgc:161979 236.19 1770.38
88. rpl35a ENSDARG00000088030 235.42 1764.60 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
89. faua ENSDARG00000099022 232.34 1741.52 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
90. ptmab ENSDARG00000101766 232.34 1741.52 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
91. rps24 ENSDARG00000039347 228.49 1712.66 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
92. rps27.1 ENSDARG00000023298 226.19 1695.42 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
93. rplp2l ENSDARG00000011201 225.42 1689.65 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
94. rpl35 ENSDARG00000018334 223.11 1672.33 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
95. mt-nd3 ENSDARG00000063914 222.34 1666.56 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
96. tpm3 ENSDARG00000005162 216.95 1626.16 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
97. cyt1l ENSDARG00000036832 214.65 1608.92 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
98. rps7 ENSDARG00000042566 213.88 1603.15 ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-040426-1718]
99. eif5a ENSDARG00000017235 213.11 1597.38 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
100. rpl5b ENSDARG00000015862, ENSDARG00000109661 212.34 1591.61 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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