Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo1, section s47.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 32549.92 244010.70
2. krt4 ENSDARG00000017624, ENSDARG00000115790 2927.29 21944.45 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2752.15 20631.51 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2013.53 15094.44 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. ckma ENSDARG00000035327, ENSDARG00000114671 1969.45 14764.00 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1646.34 12341.80 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
7. mt-co2 ENSDARG00000063908 1344.97 10082.58 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. actc1b ENSDARG00000099197 1237.47 9276.70 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
9. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1144.47 8579.53 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
10. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1134.20 8502.54 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
11. mylz3 ENSDARG00000017441 1122.12 8411.98 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
12. myhz1.3 ENSDARG00000067997 1102.19 8262.58 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
13. apoc1l apoc1l 1091.32 8181.09
14. acta1b ENSDARG00000055618 1032.74 7741.94 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
15. atp2a1 ENSDARG00000020574 1023.68 7674.02 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. mt-co3 ENSDARG00000063912 943.96 7076.40 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. mt-atp6 ENSDARG00000063911 910.14 6822.87 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
18. mt-nd2 ENSDARG00000063899 878.73 6587.41 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. si:dkey-151g10.6 si:dkey-151g10.6 870.88 6528.56
20. mt-nd4 ENSDARG00000063917 863.03 6469.71 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
21. tmsb4x ENSDARG00000077777 681.85 5111.49 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
22. tnnt3a ENSDARG00000030270 676.41 5070.71 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
23. apoa2 ENSDARG00000015866 675.81 5066.21 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
24. actb2 ENSDARG00000037870 672.18 5039.00 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
25. mt-cyb ENSDARG00000063924 667.35 5002.79 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. tnni2a.4 ENSDARG00000029069 647.42 4853.39 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
27. acta1a ENSDARG00000036371 625.08 4685.92 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
28. eef1a1l1 ENSDARG00000020850 570.12 4273.91 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
29. pvalb1 ENSDARG00000037789 568.91 4264.84 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
30. apobb apobb 506.10 3793.98
31. mt-nd1 ENSDARG00000063895 498.85 3739.63 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
32. myl1 ENSDARG00000014196 485.57 3640.08 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
33. apoeb ENSDARG00000040295 473.49 3549.52 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
34. si:ch211-226o13.2 451.75 3386.55 si:ch211-226o13.2
35. apoa1b ENSDARG00000101324 434.23 3255.21 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
36. tnnt3b ENSDARG00000068457 428.80 3214.50 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
37. aldoab ENSDARG00000034470 400.41 3001.68 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
38. zgc:161979_1 zgc:161979_1 398.00 2983.61
39. actb1 ENSDARG00000037746, ENSDARG00000113649 379.88 2847.77 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 356.32 2671.16 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. mylpfb ENSDARG00000002589 350.89 2630.45 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
42. rpl23 ENSDARG00000053457 350.28 2625.88 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
43. ppiaa ENSDARG00000009212 348.47 2612.31 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
44. myl10 ENSDARG00000062592 346.06 2594.24 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
45. zgc:66286 zgc:66286 328.54 2462.90
46. zgc:92533 zgc:92533 301.37 2259.22
47. rpl11 ENSDARG00000043509 295.33 2213.94 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
48. mt-co1 ENSDARG00000063905 292.91 2195.80 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. btf3 ENSDARG00000035400, ENSDARG00000116462 289.29 2168.66 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
50. rplp1 ENSDARG00000021864 289.29 2168.66 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
51. hbae3 ENSDARG00000079305 285.06 2136.95 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
52. ttna ttna 277.81 2082.60
53. rpl8 ENSDARG00000014867 260.30 1951.34 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
54. rps27a ENSDARG00000032725, ENSDARG00000114059 259.09 1942.27 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
55. rpl36a ENSDARG00000058105, ENSDARG00000112656 257.88 1933.20 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
56. rps23 ENSDARG00000021838 249.43 1869.85 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
57. rpl18a ENSDARG00000025073 247.62 1856.29 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
58. gapdh ENSDARG00000043457 245.20 1838.14 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
59. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 245.20 1838.14 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
60. rpl26 ENSDARG00000102317 245.20 1838.14 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
61. tpm3 ENSDARG00000005162 242.18 1815.50 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
62. rpl19 ENSDARG00000013307 241.58 1811.01 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
63. ttnb ttnb 241.58 1811.01
64. apoa1a ENSDARG00000012076, ENSDARG00000110395 240.97 1806.43 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
65. rpl21 ENSDARG00000010516, ENSDARG00000110263 240.37 1801.94 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
66. ptmab ENSDARG00000101766 233.72 1752.08 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
67. rps9 ENSDARG00000011405, ENSDARG00000113248 233.12 1747.59 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
68. ATP5B 232.52 1743.09 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
69. apoa4 apoa4 226.48 1697.81
70. rplp2 ENSDARG00000101406 225.87 1693.24 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
71. nme2b.2 ENSDARG00000099420 223.46 1675.17 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
72. hspa8 ENSDARG00000068992, ENSDARG00000114726 219.83 1647.96 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
73. rpl18 ENSDARG00000029533 216.81 1625.32 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
74. rps26l ENSDARG00000030408 216.21 1620.82 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
75. rps5 ENSDARG00000043453 214.40 1607.25 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
76. rpl9 ENSDARG00000037350, ENSDARG00000112384 213.79 1602.68 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
77. hmga1a ENSDARG00000028335 208.96 1566.47 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
78. myhz2 ENSDARG00000012944 206.55 1548.40 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
79. rpl7 ENSDARG00000007320 203.53 1525.76 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
80. rbp4 ENSDARG00000101199 201.72 1512.20 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
81. rpl27 ENSDARG00000015128 201.11 1507.62 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
82. hbbe3 ENSDARG00000038147, ENSDARG00000109344 199.30 1494.05 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
83. rps20 ENSDARG00000036044 196.88 1475.91 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
84. rps2 ENSDARG00000077291 196.28 1471.41 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
85. rps15 ENSDARG00000070849, ENSDARG00000110979 189.03 1417.06 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
86. tnni2b.1 ENSDARG00000035958 187.22 1403.50 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
87. rps15a ENSDARG00000010160 181.79 1362.79 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
88. rps14 ENSDARG00000036629 178.77 1340.15 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
89. cfl1l ENSDARG00000012972 178.16 1335.58 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
90. pkmb ENSDARG00000099860 178.16 1335.58 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
91. zgc:153129 zgc:153129 178.16 1335.58
92. zgc:161979 zgc:161979 176.95 1326.51
93. eif5a ENSDARG00000017235 175.75 1317.51 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
94. fkbp1aa ENSDARG00000022684 173.93 1303.87 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
95. cyt1l ENSDARG00000036832 173.33 1299.37 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
96. hbbe1.1 ENSDARG00000113599 173.33 1299.37 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
97. rpl36 ENSDARG00000100588 170.31 1276.73 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
98. rps4x ENSDARG00000014690 168.50 1263.16 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
99. faua ENSDARG00000099022 167.90 1258.66 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
100. zgc:112425 zgc:112425 167.90 1258.66
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA