Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo1, section s46.

Sample reads: 133,413. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 13421.70 100602.96
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3725.80 27926.90 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 3411.98 25574.65 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 3249.84 24359.32 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. ckma ENSDARG00000035327, ENSDARG00000114671 2073.43 15541.49 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1981.46 14852.12 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
7. mt-co2 ENSDARG00000063908 1637.56 12274.41 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mylz3 ENSDARG00000017441 1538.18 11529.50 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1423.55 10670.28 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
10. actc1b ENSDARG00000099197 1421.80 10657.17 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
11. acta1b ENSDARG00000055618 1238.74 9285.03 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
12. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1207.36 9049.82 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
13. atp2a1 ENSDARG00000020574 1206.48 9043.23 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
14. myhz1.3 ENSDARG00000067997 1205.61 9036.70 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
15. mt-nd4 ENSDARG00000063917 1116.26 8366.98 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
16. tmsb4x ENSDARG00000077777 1108.85 8311.44 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
17. apoa2 ENSDARG00000015866 1086.18 8141.51 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
18. mt-atp6 ENSDARG00000063911 1037.37 7775.65 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
19. apoc1l apoc1l 1008.16 7556.71
20. tnni2a.4 ENSDARG00000029069 1001.63 7507.76 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
21. mt-co3 ENSDARG00000063912 953.24 7145.05 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. mt-nd2 ENSDARG00000063899 894.84 6707.31 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
23. apobb apobb 754.49 5655.31
24. si:dkey-151g10.6 si:dkey-151g10.6 744.90 5583.43
25. mt-cyb ENSDARG00000063924 703.49 5273.04 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
26. si:ch211-226o13.2 674.72 5057.39 si:ch211-226o13.2
27. eef1a1l1 ENSDARG00000020850 669.06 5014.97 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. myl1 ENSDARG00000014196 647.26 4851.57 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
29. actb2 ENSDARG00000037870 600.63 4502.05 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
30. pvalb1 ENSDARG00000037789 563.14 4221.04 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
31. mt-nd1 ENSDARG00000063895 546.58 4096.92 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
32. tnnt3a ENSDARG00000030270 544.84 4083.87 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
33. tnnt3b ENSDARG00000068457 534.37 4005.39 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
34. apoeb ENSDARG00000040295 504.74 3783.30 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
35. actb1 ENSDARG00000037746, ENSDARG00000113649 489.48 3668.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
36. mylpfb ENSDARG00000002589 473.35 3548.02 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
37. acta1a ENSDARG00000036371 458.97 3440.23 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
38. rpl23 ENSDARG00000053457 448.94 3365.05 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
39. apoa1b ENSDARG00000101324 437.61 3280.13 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
40. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 429.33 3218.06 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
41. aldoab ENSDARG00000034470 419.74 3146.18 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
42. rpl10a ENSDARG00000042905, ENSDARG00000115649 397.08 2976.33 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
43. zgc:161979_1 zgc:161979_1 396.64 2973.03
44. mt-co1 ENSDARG00000063905 391.85 2937.13 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
45. zgc:92533 zgc:92533 389.67 2920.79
46. hbae3 ENSDARG00000079305 368.31 2760.68 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
47. gapdh ENSDARG00000043457 362.21 2714.96 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
48. ttna ttna 360.90 2705.14
49. nme2b.2 ENSDARG00000099420 348.69 2613.62 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
50. ppiaa ENSDARG00000009212 346.95 2600.58 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. zgc:66286 zgc:66286 336.93 2525.47
52. ttnb ttnb 320.36 2401.27
53. myl10 ENSDARG00000062592 300.75 2254.29 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
54. col1a1b ENSDARG00000035809 277.21 2077.84 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
55. rbp4 ENSDARG00000101199 274.16 2054.98 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
56. col2a1a ENSDARG00000069093, ENSDARG00000111202 268.93 2015.78 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 263.26 1973.28 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. col1a1a ENSDARG00000012405, ENSDARG00000116113 263.26 1973.28 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
59. rpl8 ENSDARG00000014867 260.65 1953.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
60. ATP5B 260.21 1950.42 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
61. rpl36a ENSDARG00000058105, ENSDARG00000112656 253.24 1898.17 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
62. btf3 ENSDARG00000035400, ENSDARG00000116462 252.37 1891.65 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
63. rps23 ENSDARG00000021838 249.75 1872.01 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
64. hbbe3 ENSDARG00000038147, ENSDARG00000109344 249.32 1868.79 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
65. zgc:112425 zgc:112425 249.32 1868.79
66. rpl21 ENSDARG00000010516, ENSDARG00000110263 248.88 1865.49 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
67. tpm3 ENSDARG00000005162 244.52 1832.81 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
68. cyt1l ENSDARG00000036832 236.68 1774.05 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
69. hspa8 ENSDARG00000068992, ENSDARG00000114726 236.68 1774.05 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
70. rps20 ENSDARG00000036044 234.93 1760.93 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
71. myhz2 ENSDARG00000012944 229.70 1721.73 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
72. rpl9 ENSDARG00000037350, ENSDARG00000112384 227.96 1708.68 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
73. rps27a ENSDARG00000032725, ENSDARG00000114059 227.52 1705.39 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
74. hbbe1.1 ENSDARG00000113599 226.65 1698.87 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
75. rplp1 ENSDARG00000021864 224.47 1682.53 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
76. rps26l ENSDARG00000030408 224.47 1682.53 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
77. hmga1a ENSDARG00000028335 222.73 1669.48 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
78. rpl26 ENSDARG00000102317 215.75 1617.16 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
79. apoa4 apoa4 214.88 1610.64
80. eif5a ENSDARG00000017235 211.40 1584.56 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
81. ptmab ENSDARG00000101766 211.40 1584.56 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
82. rpl19 ENSDARG00000013307 211.40 1584.56 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
83. cfl1l ENSDARG00000012972 205.29 1538.76 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
84. rpl18 ENSDARG00000029533 205.29 1538.76 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
85. zgc:161979 zgc:161979 201.81 1512.68
86. pfn1 ENSDARG00000088091 200.06 1499.56 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
87. zgc:153129 zgc:153129 200.06 1499.56
88. pkmb ENSDARG00000099860 194.40 1457.13 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
89. si:dkeyp-113d7.4 si:dkeyp-113d7.4 194.40 1457.13
90. rpl11 ENSDARG00000043509 193.53 1450.61 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
91. pvalb4 ENSDARG00000024433 190.47 1427.68 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
92. smyhc1 ENSDARG00000099959, ENSDARG00000115916 190.04 1424.45 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
93. rplp2 ENSDARG00000101406 188.30 1411.41 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
94. tmem38a ENSDARG00000024047 184.37 1381.95 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
95. rpl18a ENSDARG00000025073 182.19 1365.61 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
96. rps19 ENSDARG00000030602 179.14 1342.75 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
97. faua ENSDARG00000099022 176.09 1319.89 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. rpl7 ENSDARG00000007320 172.17 1290.51 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
99. rpl27 ENSDARG00000015128 171.73 1287.21 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
100. icn ENSDARG00000009978 171.30 1283.99 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA