Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_whole_embryo1, section s29.

Sample reads: 133,391. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 29674.89 222466.43
2. krt4 ENSDARG00000017624, ENSDARG00000115790 3070.88 23021.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2464.55 18476.21 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckma ENSDARG00000035327, ENSDARG00000114671 1900.45 14247.28 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
5. ckmb ENSDARG00000040565 1825.03 13681.87 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
6. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1825.03 13681.87 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
7. apoc1l apoc1l 1531.67 11482.61
8. mt-co2 ENSDARG00000063908 1335.59 10012.64 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
9. actc1b ENSDARG00000099197 1248.11 9356.82 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
10. mylz3 ENSDARG00000017441 1237.55 9277.65 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
11. apoa2 ENSDARG00000015866 1142.53 8565.31 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
12. atp2a1 ENSDARG00000020574 1085.22 8135.67 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1046.75 7847.27 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
14. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1006.78 7547.62 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
15. acta1b ENSDARG00000055618 996.98 7474.15 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
16. tmsb4x ENSDARG00000077777 993.96 7451.51 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
17. apoa1b ENSDARG00000101324 961.54 7208.46 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
18. mt-atp6 ENSDARG00000063911 951.73 7134.92 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
19. apobb apobb 862.74 6467.78
20. apoeb ENSDARG00000040295 835.59 6264.24 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
21. actb2 ENSDARG00000037870 831.07 6230.36 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. mt-co3 ENSDARG00000063912 806.94 6049.46 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
23. mt-nd4 ENSDARG00000063917 715.68 5365.30 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. si:dkey-151g10.6 si:dkey-151g10.6 700.60 5252.25
25. zgc:161979_1 zgc:161979_1 687.78 5156.14
26. tnni2a.4 ENSDARG00000029069 639.52 4794.35 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
27. eef1a1l1 ENSDARG00000020850 595.02 4460.74 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. mt-nd2 ENSDARG00000063899 592.00 4438.10 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
29. tnnt3a ENSDARG00000030270 545.25 4087.62 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
30. mt-cyb ENSDARG00000063924 536.20 4019.78 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
31. pvalb1 ENSDARG00000037789 477.37 3578.74 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
32. apoa1a ENSDARG00000012076, ENSDARG00000110395 472.10 3539.23 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
33. hbbe3 ENSDARG00000038147, ENSDARG00000109344 469.08 3516.59 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
34. myl1 ENSDARG00000014196 466.82 3499.65 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
35. hbae3 ENSDARG00000079305 461.54 3460.07 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
36. rpl23 ENSDARG00000053457 424.58 3182.99 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
37. apoa4 apoa4 420.06 3149.10
38. acta1a ENSDARG00000036371 417.04 3126.46 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
39. tnnt3b ENSDARG00000068457 409.50 3069.94 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 392.16 2939.94 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. zgc:161979 zgc:161979 391.40 2934.24
42. mt-nd1 ENSDARG00000063895 390.65 2928.62 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
43. zgc:92533 zgc:92533 390.65 2928.62
44. actb1 ENSDARG00000037746, ENSDARG00000113649 389.89 2922.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
45. bhmt ENSDARG00000013430 327.30 2453.70 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
46. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 324.28 2431.06 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
47. mylpfb ENSDARG00000002589 313.72 2351.89 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
48. si:ch211-226o13.2 297.13 2227.52 si:ch211-226o13.2
49. aldoab ENSDARG00000034470 285.07 2137.11 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
50. ppiaa ENSDARG00000009212 284.31 2131.41 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
51. rpl18a ENSDARG00000025073 283.56 2125.79 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
52. myhz1.2 ENSDARG00000067995 282.80 2120.09 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
53. rplp2 ENSDARG00000101406 281.30 2108.85 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
54. hbbe1.1 ENSDARG00000113599 273.75 2052.25 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
55. btf3 ENSDARG00000035400, ENSDARG00000116462 270.74 2029.68 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
56. rpl8 ENSDARG00000014867 270.74 2029.68 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
57. rpl21 ENSDARG00000010516, ENSDARG00000110263 258.67 1939.19 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 258.67 1939.19 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. rps23 ENSDARG00000021838 258.67 1939.19 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
60. gapdh ENSDARG00000043457 257.92 1933.57 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
61. nme2b.2 ENSDARG00000099420 252.64 1893.99 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
62. rps27a ENSDARG00000032725, ENSDARG00000114059 250.38 1877.05 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
63. apoc2 ENSDARG00000092155 243.59 1826.14 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
64. rps9 ENSDARG00000011405, ENSDARG00000113248 243.59 1826.14 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
65. hspa8 ENSDARG00000068992, ENSDARG00000114726 241.33 1809.20 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
66. rps26l ENSDARG00000030408 240.57 1803.50 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
67. myhz1.3 ENSDARG00000067997 239.06 1792.18 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
68. rpl36 ENSDARG00000100588 237.56 1780.94 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
69. rps15 ENSDARG00000070849, ENSDARG00000110979 236.80 1775.24 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
70. rplp1 ENSDARG00000021864 234.54 1758.30 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
71. rpl11 ENSDARG00000043509 231.52 1735.66 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
72. ttna ttna 231.52 1735.66
73. rps20 ENSDARG00000036044 228.51 1713.09 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
74. rpl9 ENSDARG00000037350, ENSDARG00000112384 227.75 1707.39 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
75. ptmab ENSDARG00000101766 227.00 1701.77 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
76. rbp4 ENSDARG00000101199 224.74 1684.83 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
77. rpl19 ENSDARG00000013307 217.95 1633.93 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
78. zgc:153129 zgc:153129 212.67 1594.34
79. hbae1_1 211.92 1588.72 hemoglobin, alpha embryonic 1
80. mt-co1 ENSDARG00000063905 211.92 1588.72 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
81. rpl18 ENSDARG00000029533 211.16 1583.02 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
82. myl10 ENSDARG00000062592 204.37 1532.12 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
83. pkmb ENSDARG00000099860 200.60 1503.86 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
84. rpl27 ENSDARG00000015128 200.60 1503.86 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
85. ttnb ttnb 199.09 1492.54
86. ATP5B 197.59 1481.29 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
87. hmga1a ENSDARG00000028335 194.57 1458.65 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
88. zgc:66286 zgc:66286 193.82 1453.03
89. rpl26 ENSDARG00000102317 193.06 1447.33 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
90. zgc:112425 zgc:112425 187.03 1402.12
91. pfn1 ENSDARG00000088091 186.27 1396.43 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
92. rps14 ENSDARG00000036629 186.27 1396.43 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
93. faua ENSDARG00000099022 185.52 1390.80 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
94. rps12 ENSDARG00000036875, ENSDARG00000115157 184.01 1379.48 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
95. rps2 ENSDARG00000077291 181.00 1356.92 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
96. rplp2l ENSDARG00000011201 180.24 1351.22 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
97. hbbe1.1_1 ENSDARG00000113599 176.47 1322.96 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
98. tnni2b.1 ENSDARG00000035958 176.47 1322.96 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
99. fkbp1aa ENSDARG00000022684 175.72 1317.34 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
100. rps19 ENSDARG00000030602 175.72 1317.34 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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