Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo1, section s22.

Sample reads: 133,412. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16154.87 121089.63
2. apoa2 ENSDARG00000015866 3655.51 27400.06 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
3. apoc1l apoc1l 3589.11 26902.35
4. apobb apobb 3405.13 25523.32
5. apoa1b ENSDARG00000101324 2346.32 17586.96 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 2019.36 15136.21 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. hbae3 ENSDARG00000079305 1648.69 12357.84 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
8. apoa1a ENSDARG00000012076, ENSDARG00000110395 1596.85 11969.27 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
9. hbbe3 ENSDARG00000038147, ENSDARG00000109344 1530.78 11474.04 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
10. hbbe1.1 ENSDARG00000113599 1246.51 9343.28 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
11. apoeb ENSDARG00000040295 1244.14 9325.51 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
12. tmsb4x ENSDARG00000077777 1168.59 8759.22 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
13. zgc:161979_1 zgc:161979_1 1086.59 8144.59
14. pvalb2 ENSDARG00000002768, ENSDARG00000114085 982.24 7362.43 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
15. zgc:161979 zgc:161979 913.46 6846.88
16. bhmt ENSDARG00000013430 871.44 6531.92 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
17. tpma ENSDARG00000033683 839.59 6293.19 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
18. mt-co2 ENSDARG00000063908 819.60 6143.35 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. actb2 ENSDARG00000037870 817.91 6130.68 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
20. apoa4 apoa4 769.12 5764.98
21. ckma ENSDARG00000035327, ENSDARG00000114671 702.37 5264.65 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
22. eef1a1l1 ENSDARG00000020850 677.64 5079.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. hbbe1.1_1 ENSDARG00000113599 657.31 4926.90 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
24. si:dkey-151g10.6 si:dkey-151g10.6 609.87 4571.31
25. hbae1_1 601.06 4505.27 hemoglobin, alpha embryonic 1
26. ckmb ENSDARG00000040565 571.59 4284.38 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
27. apoc2 ENSDARG00000092155 562.44 4215.80 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
28. ctsla ENSDARG00000007836 531.95 3987.26 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
29. actc1b ENSDARG00000099197 473.67 3550.42 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
30. mt-co3 ENSDARG00000063912 472.65 3542.77 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
31. zgc:112425 zgc:112425 465.88 3492.03
32. slc43a2b ENSDARG00000061120, ENSDARG00000117188 459.78 3446.30 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
33. pla2g12b ENSDARG00000015662 442.16 3314.23 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
34. AL935210.1 ENSDARG00000088330 433.35 3248.20 hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
35. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 421.83 3161.85 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
36. mt-atp6 ENSDARG00000063911 415.39 3113.58 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
37. actb1 ENSDARG00000037746, ENSDARG00000113649 388.62 2912.92 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
38. zgc:153129 zgc:153129 376.09 2819.00
39. tfa ENSDARG00000016771 375.07 2811.36 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
40. mylz3 ENSDARG00000017441 368.63 2763.08 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
41. ppiaa ENSDARG00000009212 368.30 2760.61 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
42. atp2a1 ENSDARG00000020574 360.84 2704.69 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
43. mt-nd4 ENSDARG00000063917 354.74 2658.97 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
44. gamt ENSDARG00000070844, ENSDARG00000109945 347.97 2608.23 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
45. mt-cyb ENSDARG00000063924 342.21 2565.05 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
46. rpl10a ENSDARG00000042905, ENSDARG00000115649 341.19 2557.41 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
47. rpl23 ENSDARG00000053457 340.51 2552.31 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
48. mt-nd2 ENSDARG00000063899 340.17 2549.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
49. hmga1a ENSDARG00000028335 302.23 2265.38 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
50. eef2b ENSDARG00000100371, ENSDARG00000109247 293.76 2201.89 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
51. tnnc2 ENSDARG00000070835, ENSDARG00000111155 293.08 2196.80 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
52. sepp1a 284.27 2130.76 selenoprotein P, plasma, 1a
53. pvalb1 ENSDARG00000037789 275.46 2064.72 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
54. APOB APOB 269.36 2019.00
55. hspa8 ENSDARG00000068992, ENSDARG00000114726 265.63 1991.04 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. ptmab ENSDARG00000101766 262.58 1968.18 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
57. tnni2a.4 ENSDARG00000029069 260.21 1950.42 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
58. si:busm1-118j2.5 si:busm1-118j2.5 256.82 1925.01
59. pvalb9 ENSDARG00000071601, ENSDARG00000113946 256.49 1922.53 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
60. acta1b ENSDARG00000055618 238.19 1785.36 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
61. gapdh ENSDARG00000043457 232.43 1742.19 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
62. rpl9 ENSDARG00000037350, ENSDARG00000112384 221.25 1658.39 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
63. rpl8 ENSDARG00000014867 218.88 1640.63 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
64. hbae1 218.20 1635.53 hemoglobin, alpha embryonic 1
65. rps23 ENSDARG00000021838 214.13 1605.02 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
66. psap ENSDARG00000013968 213.12 1597.45 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
67. mt-nd1 ENSDARG00000063895 207.70 1556.83 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
68. mthfd1l ENSDARG00000042221, ENSDARG00000110473 205.66 1541.53 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
69. ldhba ENSDARG00000019644 203.97 1528.87 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
70. gatm ENSDARG00000036239 202.95 1521.22 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
71. rps20 ENSDARG00000036044 198.55 1488.24 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
72. ahcy ENSDARG00000005191 195.50 1465.38 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
73. rpl21 ENSDARG00000010516, ENSDARG00000110263 194.82 1460.28 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
74. btf3 ENSDARG00000035400, ENSDARG00000116462 192.11 1439.97 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
75. apoea ENSDARG00000102004 191.09 1432.32 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
76. hsp90ab1 ENSDARG00000029150 191.09 1432.32 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
77. rpl36a ENSDARG00000058105, ENSDARG00000112656 190.42 1427.30 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
78. rpl19 ENSDARG00000013307 189.06 1417.11 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
79. zgc:92533 zgc:92533 187.03 1401.89
80. rplp1 ENSDARG00000021864 186.35 1396.80 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
81. rbp4 ENSDARG00000101199 184.99 1386.60 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
82. prdx5 ENSDARG00000055064 183.64 1376.48 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
83. rpl11 ENSDARG00000043509 183.30 1373.93 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
84. slc4a1a ENSDARG00000012881 178.90 1340.95 solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
85. rpl18a ENSDARG00000025073 178.22 1335.86 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
86. rpl26 ENSDARG00000102317 176.86 1325.66 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
87. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 175.17 1313.00 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
88. rps27a ENSDARG00000032725, ENSDARG00000114059 174.15 1305.35 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
89. fabp2 ENSDARG00000006427, ENSDARG00000110230 173.14 1297.78 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
90. icn ENSDARG00000009978 172.46 1292.68 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
91. rps15 ENSDARG00000070849, ENSDARG00000110979 169.07 1267.27 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
92. aldob ENSDARG00000053684 167.38 1254.61 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
93. fth1a ENSDARG00000015551 166.70 1249.51 ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
94. rps5 ENSDARG00000043453 166.70 1249.51 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
95. rps2 ENSDARG00000077291 166.02 1244.41 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
96. slc43a2a ENSDARG00000036848 163.31 1224.10 solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
97. rpl27 ENSDARG00000015128 161.96 1213.98 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
98. fetub ENSDARG00000053973 159.24 1193.59 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
99. eif5a ENSDARG00000017235 158.23 1186.02 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
100. si:dkeyp-86f7.3 si:dkeyp-86f7.3 157.21 1178.38
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA