Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo1, section s16.

Sample reads: 133,413. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 26345.25 197470.93
2. he1a 4298.19 32217.10 hatching enzyme 1a, transcript variant X1
3. zgc:174855 ENSDARG00000094559 3414.75 25595.27 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
4. krt4 ENSDARG00000017624, ENSDARG00000115790 1921.40 14401.86 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
5. si:dkey-269i1.3 1890.86 14172.95 si:dkey-269i1.3
6. CABZ01044814.2 CABZ01044814.2 1723.56 12918.95
7. he1b 1448.23 10855.21 hatching enzyme 1b
8. tmsb4x ENSDARG00000077777 1445.95 10838.12 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. ctslb ENSDARG00000039173, ENSDARG00000074306 1261.79 9457.75 cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
10. mt-co2 ENSDARG00000063908 1037.05 7773.21 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. si:dkey-239j18.3 ENSDARG00000089806 947.25 7100.12 si:dkey-239j18.3 [Source:ZFIN;Acc:ZDB-GENE-121214-39]
12. wu:fa26c03 888.45 6659.38 wu:fa26c03
13. si:dkey-151g10.6 si:dkey-151g10.6 805.48 6037.48
14. actb2 ENSDARG00000037870 688.33 5159.38 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
15. icn ENSDARG00000009978 624.06 4677.64 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
16. eef1a1l1 ENSDARG00000020850 623.14 4670.75 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. ptmab ENSDARG00000101766 604.91 4534.11 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
18. ppiaa ENSDARG00000009212 538.81 4038.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
19. si:dkey-26g8.5 ENSDARG00000089750 500.98 3755.10 si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
20. zgc:112425 zgc:112425 488.67 3662.83
21. mt-co3 ENSDARG00000063912 487.30 3652.56 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. hmga1a ENSDARG00000028335 453.11 3396.29 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
23. hspa8 ENSDARG00000068992, ENSDARG00000114726 432.14 3239.11 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
24. apoa2 ENSDARG00000015866 414.37 3105.91 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
25. apobb apobb 412.09 3088.82
26. apoc1l apoc1l 392.48 2941.84
27. zgc:174153 ENSDARG00000079376 378.35 2835.92 zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
28. eef2b ENSDARG00000100371, ENSDARG00000109247 373.34 2798.37 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
29. rpl23 ENSDARG00000053457 369.24 2767.64 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
30. AL954137.2 ENSDARG00000114408 357.84 2682.19
31. hbbe3 ENSDARG00000038147, ENSDARG00000109344 350.55 2627.55 hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
32. actb1 ENSDARG00000037746, ENSDARG00000113649 349.18 2617.28 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
33. mt-atp6 ENSDARG00000063911 331.40 2484.01 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
34. si:dkey-150i13.2 ENSDARG00000071052 312.26 2340.55 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
35. rpl10a ENSDARG00000042905, ENSDARG00000115649 308.61 2313.19 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
36. apoa1b ENSDARG00000101324 307.70 2306.37 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
37. mt-cyb ENSDARG00000063924 304.51 2282.46 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
38. mt-nd2 ENSDARG00000063899 297.67 2231.19 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
39. si:dkey-269i1.2 si:dkey-269i1.2 283.99 2128.65
40. hsp90ab1 ENSDARG00000029150 283.54 2125.28 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
41. hmgn2 ENSDARG00000099572 279.89 2097.92 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
42. hbae3 ENSDARG00000079305 274.88 2060.36 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
43. id1 ENSDARG00000040764 273.05 2046.65 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
44. krt8 ENSDARG00000058358, ENSDARG00000109279 267.58 2005.65 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
45. rpl36a ENSDARG00000058105, ENSDARG00000112656 256.64 1923.65 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
46. rps23 ENSDARG00000021838 252.54 1892.91 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
47. pnrc2 ENSDARG00000053291, ENSDARG00000112537 244.33 1831.38 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
48. mt-nd4 ENSDARG00000063917 243.42 1824.56 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
49. rpl11 ENSDARG00000043509 232.94 1746.00 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
50. zgc:92533 zgc:92533 231.57 1735.73
51. hbbe1.1 ENSDARG00000113599 230.20 1725.47 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
52. rps15 ENSDARG00000070849, ENSDARG00000110979 224.73 1684.46 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
53. rpl9 ENSDARG00000037350, ENSDARG00000112384 221.54 1660.55 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
54. rplp1 ENSDARG00000021864 220.63 1653.73 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
55. mt-co1 ENSDARG00000063905 218.35 1636.64 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. btf3 ENSDARG00000035400, ENSDARG00000116462 214.70 1609.28 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
57. apoa1a ENSDARG00000012076, ENSDARG00000110395 213.34 1599.09 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
58. cirbp cirbp 200.57 1503.37
59. rps27.1 ENSDARG00000023298 200.12 1500.00 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
60. rps2 ENSDARG00000077291 197.38 1479.46 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
61. rps20 ENSDARG00000036044 196.47 1472.64 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
62. rpl27 ENSDARG00000015128 195.10 1462.37 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
63. rps15a ENSDARG00000010160 194.19 1455.55 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
64. rplp2 ENSDARG00000101406 193.28 1448.73 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
65. khdrbs1a ENSDARG00000052856 191.91 1438.46 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
66. rpl26 ENSDARG00000102317 188.72 1414.55 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
67. rpl8 ENSDARG00000014867 188.72 1414.55 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
68. fkbp1aa ENSDARG00000022684 187.35 1404.28 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
69. rpl21 ENSDARG00000010516, ENSDARG00000110263 185.99 1394.09 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
70. cfl1 ENSDARG00000021124 185.07 1387.19 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
71. faua ENSDARG00000099022 185.07 1387.19 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
72. si:dkeyp-86f7.3 si:dkeyp-86f7.3 184.62 1383.82
73. h3f3a 183.25 1373.55 H3 histone, family 3A, transcript variant X1
74. rps9 ENSDARG00000011405, ENSDARG00000113248 182.79 1370.10 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
75. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 182.34 1366.73 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
76. mt-nd1 ENSDARG00000063895 178.24 1336.00 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
77. rps27a ENSDARG00000032725, ENSDARG00000114059 176.87 1325.73 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
78. rpl7 ENSDARG00000007320 174.13 1305.19 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
79. hnrnpab hnrnpab 173.68 1301.82
80. rps14 ENSDARG00000036629 171.85 1288.10 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
81. rpl18a ENSDARG00000025073 165.02 1236.91 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
82. rps12 ENSDARG00000036875, ENSDARG00000115157 165.02 1236.91 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
83. rps24 ENSDARG00000039347 165.02 1236.91 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
84. cd63 ENSDARG00000025147, ENSDARG00000115979 164.56 1233.46 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
85. rpsa ENSDARG00000019181 162.74 1219.82 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
86. eif5a ENSDARG00000017235 160.00 1199.28 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
87. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 159.55 1195.91 lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
88. zgc:153129 zgc:153129 157.27 1178.82
89. ptmaa ENSDARG00000021113, ENSDARG00000110479 155.90 1168.55 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
90. si:dkey-269i1.4 ENSDARG00000095744, ENSDARG00000100833 151.80 1137.82 si:dkey-269i1.4 [Source:ZFIN;Acc:ZDB-GENE-121214-37]
91. rps3a ENSDARG00000035692, ENSDARG00000114628, ENSDARG00000115378 147.24 1103.64 ribosomal protein S3A [Source:ZFIN;Acc:ZDB-GENE-030131-9184]
92. apoa4 apoa4 144.05 1079.73
93. zgc:161979 zgc:161979 143.14 1072.91
94. eef1g ENSDARG00000056119 142.22 1066.01 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
95. si:ch1073-429i10.3 140.86 1055.82 si:ch1073-429i10.3, transcript variant X2
96. rps26l ENSDARG00000030408 138.58 1038.73 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
97. zgc:161979_1 zgc:161979_1 137.67 1031.91
98. rpl6 ENSDARG00000058451 136.30 1021.64 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
99. rpl35a ENSDARG00000088030 135.39 1014.82 ribosomal protein L35a [Source:ZFIN;Acc:ZDB-GENE-040718-190]
100. rpl19 ENSDARG00000013307 134.93 1011.37 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA