Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_whole_embryo1, section s14.

Sample reads: 133,413. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 15727.07 117882.91
2. tmsb4x ENSDARG00000077777 1389.95 10418.43 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
3. krt4 ENSDARG00000017624, ENSDARG00000115790 1345.46 10084.95 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. mt-co2 ENSDARG00000063908 1173.80 8798.27 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
5. zgc:112425 zgc:112425 1146.04 8590.19
6. actb2 ENSDARG00000037870 1033.39 7745.82 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. ptmab ENSDARG00000101766 1004.04 7525.82 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
8. ppiaa ENSDARG00000009212 969.02 7263.33 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
9. eef1a1l1 ENSDARG00000020850 957.97 7180.50 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
10. hmga1a ENSDARG00000028335 842.49 6314.92 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
11. si:dkey-151g10.6 si:dkey-151g10.6 763.29 5721.27
12. rpl10a ENSDARG00000042905, ENSDARG00000115649 591.63 4434.59 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
13. rpl23 ENSDARG00000053457 563.87 4226.51 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
14. mt-co3 ENSDARG00000063912 547.46 4103.51 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
15. actb1 ENSDARG00000037746, ENSDARG00000113649 530.10 3973.39 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
16. hsp90ab1 ENSDARG00000029150 527.58 3954.50 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
17. hspa8 ENSDARG00000068992, ENSDARG00000114726 527.26 3952.10 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
18. AL954137.2 ENSDARG00000114408 501.71 3760.59
19. eef2b ENSDARG00000100371, ENSDARG00000109247 467.94 3507.46 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
20. hmgn2 ENSDARG00000099572 438.91 3289.87 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
21. mt-atp6 ENSDARG00000063911 402.31 3015.53 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
22. id1 ENSDARG00000040764 397.89 2982.40 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
23. mt-nd4 ENSDARG00000063917 380.22 2849.95 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. rplp1 ENSDARG00000021864 376.75 2823.95 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
25. mt-nd2 ENSDARG00000063899 362.87 2719.91 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
26. si:dkeyp-86f7.3 si:dkeyp-86f7.3 361.92 2712.79
27. rpl21 ENSDARG00000010516, ENSDARG00000110263 354.03 2653.65 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
28. hnrnpab hnrnpab 350.25 2625.31
29. apoa2 ENSDARG00000015866 348.99 2615.87 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
30. rpl9 ENSDARG00000037350, ENSDARG00000112384 345.83 2592.18 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
31. rpl36a ENSDARG00000058105, ENSDARG00000112656 344.25 2580.34 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
32. rps23 ENSDARG00000021838 325.32 2438.45 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
33. rps20 ENSDARG00000036044 324.37 2431.33 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
34. h3f3a 319.64 2395.87 H3 histone, family 3A, transcript variant X1
35. rpl8 ENSDARG00000014867 313.96 2353.30 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
36. apobb apobb 311.44 2334.41
37. rpl18a ENSDARG00000025073 308.60 2313.12 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
38. cfl1 ENSDARG00000021124 307.97 2308.40 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
39. mt-cyb ENSDARG00000063924 307.97 2308.40 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
40. rps15 ENSDARG00000070849, ENSDARG00000110979 307.97 2308.40 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
41. cirbp cirbp 306.39 2296.56
42. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 303.23 2272.87 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
43. eif5a ENSDARG00000017235 301.34 2258.71 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
44. khdrbs1a ENSDARG00000052856 299.76 2246.86 KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 297.87 2232.70 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. rps9 ENSDARG00000011405, ENSDARG00000113248 297.87 2232.70 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
47. rps27a ENSDARG00000032725, ENSDARG00000114059 295.34 2213.73 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
48. pnrc2 ENSDARG00000053291, ENSDARG00000112537 295.03 2211.41 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
49. rpl26 ENSDARG00000102317 289.35 2168.83 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
50. rps27.1 ENSDARG00000023298 287.46 2154.67 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
51. rpl11 ENSDARG00000043509 286.51 2147.55 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
52. h3f3d ENSDARG00000045248 284.30 2130.98 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
53. rpl27 ENSDARG00000015128 283.35 2123.86 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
54. fkbp1aa ENSDARG00000022684 275.15 2062.40 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
55. rpl18 ENSDARG00000029533 274.83 2060.00 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
56. si:ch211-80h18.1 ENSDARG00000078522 272.63 2043.51 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
57. rps15a ENSDARG00000010160 270.42 2026.94 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
58. rps2 ENSDARG00000077291 270.42 2026.94 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
59. rpl19 ENSDARG00000013307 266.95 2000.93 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
60. rps26l ENSDARG00000030408 263.79 1977.25 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
61. si:ch1073-429i10.3 262.84 1970.13 si:ch1073-429i10.3, transcript variant X2
62. rpl36 ENSDARG00000100588 261.90 1963.08 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
63. faua ENSDARG00000099022 255.27 1913.39 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
64. rps19 ENSDARG00000030602 254.64 1908.66 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
65. rps12 ENSDARG00000036875, ENSDARG00000115157 251.80 1887.38 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
66. he1a 248.01 1858.97 hatching enzyme 1a, transcript variant X1
67. rps5 ENSDARG00000043453 245.80 1842.40 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
68. apoc1l apoc1l 238.23 1785.66
69. pabpc1a ENSDARG00000017219 235.71 1766.77 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
70. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 234.13 1754.93 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
71. rpsa ENSDARG00000019181 232.87 1745.49 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
72. hbae3 ENSDARG00000079305 232.55 1743.09 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
73. eef1g ENSDARG00000056119 232.24 1740.76 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
74. rps6 ENSDARG00000019778 230.97 1731.25 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
75. rpl35 ENSDARG00000018334 230.03 1724.20 ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
76. ptmaa ENSDARG00000021113, ENSDARG00000110479 228.77 1714.76 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
77. apoa1b ENSDARG00000101324 227.82 1707.63 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
78. rplp2 ENSDARG00000101406 225.61 1691.07 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
79. rps14 ENSDARG00000036629 225.61 1691.07 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
80. fabp3 ENSDARG00000023290 224.03 1679.23 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
81. mt-nd1 ENSDARG00000063895 221.19 1657.94 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
82. rpl6 ENSDARG00000058451 214.57 1608.32 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
83. rpl5b ENSDARG00000015862, ENSDARG00000109661 212.04 1589.35 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
84. rpl28 ENSDARG00000005791 211.10 1582.31 ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-040930-10]
85. rplp2l ENSDARG00000011201 211.10 1582.31 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
86. rpl7 ENSDARG00000007320 208.57 1563.35 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
87. pcna ENSDARG00000054155 208.26 1561.02 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
88. h2afvb ENSDARG00000116491 204.47 1532.61 H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
89. rps24 ENSDARG00000039347 203.84 1527.89 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
90. zgc:174855 ENSDARG00000094559 197.53 1480.59 zgc:174855 [Source:ZFIN;Acc:ZDB-GENE-071004-74]
91. zgc:123194 zgc:123194 196.58 1473.47
92. marcksl1b ENSDARG00000035715 194.06 1454.58 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
93. rps4x ENSDARG00000014690 193.11 1447.46 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
94. rplp0 ENSDARG00000051783 192.79 1445.07 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
95. rpl15 ENSDARG00000009285 192.48 1442.74 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
96. hnrnpa0a ENSDARG00000089302 191.22 1433.30 heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
97. marcksb ENSDARG00000008803 188.38 1412.01 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
98. ran ENSDARG00000057026 186.48 1397.77 RAN, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-990415-88]
99. nucks1a ENSDARG00000078473 183.96 1378.88 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
100. mt-co1 ENSDARG00000063905 182.70 1369.44 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA