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Experiment Zebrafish_40hpf_trunk2, section s9.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 8707.50 65269.41
2. tpma ENSDARG00000033683 5789.20 43394.51 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 4237.32 31761.97 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 3418.96 25627.74 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. ckma ENSDARG00000035327, ENSDARG00000114671 2611.00 19571.45 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. mylz3 ENSDARG00000017441 2494.57 18698.72 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
7. mt-co2 ENSDARG00000063908 2478.77 18580.29 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. krt4 ENSDARG00000017624, ENSDARG00000115790 2474.20 18546.03 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
9. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2452.57 18383.90 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
10. mt-atp6 ENSDARG00000063911 2393.94 17944.42 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. mt-nd2 ENSDARG00000063899 2340.71 17545.42 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
12. tnnc2 ENSDARG00000070835, ENSDARG00000111155 2021.77 15154.72 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
13. mt-nd4 ENSDARG00000063917 1974.78 14802.50 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. atp2a1 ENSDARG00000020574 1724.45 12926.08 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
15. acta1b ENSDARG00000055618 1586.81 11894.36 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
16. mt-co3 ENSDARG00000063912 1506.14 11289.68 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. myhz1.3 ENSDARG00000067997 1500.32 11246.05 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
18. actc1b ENSDARG00000099197 1353.53 10145.75 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
19. tnni2a.4 ENSDARG00000029069 1285.75 9637.69 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
20. mt-nd1 ENSDARG00000063895 1210.48 9073.48 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
21. mt-cyb ENSDARG00000063924 1144.37 8577.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
22. tnnt3a ENSDARG00000030270 1085.32 8135.31 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
23. pvalb1 ENSDARG00000037789 969.30 7265.65 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
24. myl1 ENSDARG00000014196 967.22 7250.06 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
25. tnnt3b ENSDARG00000068457 944.77 7081.78 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
26. si:dkey-151g10.6 si:dkey-151g10.6 917.74 6879.17
27. eef1a1l1 ENSDARG00000020850 832.91 6243.30 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. mylpfb ENSDARG00000002589 778.44 5835.01 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
29. acta1a ENSDARG00000036371 761.39 5707.20 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
30. si:ch211-226o13.2 694.85 5208.44 si:ch211-226o13.2
31. rpl10a ENSDARG00000042905, ENSDARG00000115649 597.55 4479.10 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
32. rpl23 ENSDARG00000053457 568.03 4257.82 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
33. mt-co1 ENSDARG00000063905 551.81 4136.24 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
34. tmsb4x ENSDARG00000077777 526.44 3946.07 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
35. aldoab ENSDARG00000034470 524.78 3933.63 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
36. actb2 ENSDARG00000037870 519.79 3896.23 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
37. ppiaa ENSDARG00000009212 499.41 3743.46 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
38. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 429.14 3216.73 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
39. gapdh ENSDARG00000043457 420.82 3154.37 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
40. zgc:66286 zgc:66286 401.69 3010.98
41. nme2b.2 ENSDARG00000099420 396.29 2970.50 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
42. btf3 ENSDARG00000035400, ENSDARG00000116462 387.97 2908.13 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
43. rpl8 ENSDARG00000014867 381.32 2858.29 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
44. rpl21 ENSDARG00000010516, ENSDARG00000110263 380.07 2848.92 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
45. rps23 ENSDARG00000021838 366.76 2749.15 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
46. myhz2 ENSDARG00000012944 358.45 2686.86 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
47. rpl26 ENSDARG00000102317 358.03 2683.71 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
48. ttna ttna 351.38 2633.86
49. rpl36a ENSDARG00000058105, ENSDARG00000112656 348.88 2615.12 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
50. actb1 ENSDARG00000037746, ENSDARG00000113649 343.89 2577.72 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
51. rpl9 ENSDARG00000037350, ENSDARG00000112384 329.75 2471.73 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
52. rplp1 ENSDARG00000021864 327.26 2453.07 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
53. rps27a ENSDARG00000032725, ENSDARG00000114059 323.10 2421.88 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
54. myl10 ENSDARG00000062592 311.46 2334.63 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
55. rpl27 ENSDARG00000015128 306.05 2294.08 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
56. rps26l ENSDARG00000030408 302.73 2269.19 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
57. mt-nd3 ENSDARG00000063914 299.40 2244.23 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
58. rpl11 ENSDARG00000043509 293.58 2200.61 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
59. rpl18a ENSDARG00000025073 288.17 2160.06 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
60. rpl19 ENSDARG00000013307 288.17 2160.06 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
61. ttnb ttnb 281.10 2107.06
62. ak1 ENSDARG00000001950 280.27 2100.84 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
63. tmem38a ENSDARG00000024047 277.36 2079.03 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
64. hspa8 ENSDARG00000068992, ENSDARG00000114726 275.70 2066.58 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
65. rps20 ENSDARG00000036044 267.38 2004.22 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
66. rps9 ENSDARG00000011405, ENSDARG00000113248 266.13 1994.85 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
67. rps5 ENSDARG00000043453 264.47 1982.41 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
68. tpm3 ENSDARG00000005162 264.05 1979.26 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
69. col1a1a ENSDARG00000012405, ENSDARG00000116113 255.32 1913.82 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
70. col1a1b ENSDARG00000035809 252.83 1895.16 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
71. rps2 ENSDARG00000077291 252.83 1895.16 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
72. rpl7 ENSDARG00000007320 252.41 1892.01 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
73. rps14 ENSDARG00000036629 251.16 1882.64 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
74. rplp2 ENSDARG00000101406 244.92 1835.86 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
75. pkmb ENSDARG00000099860 241.18 1807.83 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
76. eif5a ENSDARG00000017235 238.69 1789.17 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
77. ldb3b ENSDARG00000099974 234.53 1757.98 LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
78. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 228.71 1714.36 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
79. rps12 ENSDARG00000036875, ENSDARG00000115157 224.55 1683.17 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
80. atp5g3b 221.64 1661.36 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
81. tnni2b.1 ENSDARG00000035958 221.64 1661.36 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
82. faua ENSDARG00000099022 220.81 1655.14 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
83. rpl5b ENSDARG00000015862, ENSDARG00000109661 215.82 1617.74 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
84. rps19 ENSDARG00000030602 215.40 1614.59 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
85. hmga1a ENSDARG00000028335 212.91 1595.92 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
86. pvalb4 ENSDARG00000024433 209.99 1574.04 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
87. rpl15 ENSDARG00000009285 209.16 1567.82 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
88. slc25a4 ENSDARG00000027355, ENSDARG00000112318 209.16 1567.82 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
89. ATP5B 208.75 1564.74 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
90. rplp0 ENSDARG00000051783 208.33 1561.59 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
91. rplp2l ENSDARG00000011201 206.25 1546.00 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
92. rps15a ENSDARG00000010160 205.42 1539.78 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
93. rpl18 ENSDARG00000029533 204.17 1530.41 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
94. rpl6 ENSDARG00000058451 204.17 1530.41 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
95. rps27.1 ENSDARG00000023298 202.51 1517.97 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
96. rps6 ENSDARG00000019778 201.26 1508.60 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
97. rps4x ENSDARG00000014690 200.43 1502.38 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
98. fabp3 ENSDARG00000023290 197.94 1483.71 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
99. rps24 ENSDARG00000039347 197.10 1477.42 ribosomal protein S24 [Source:ZFIN;Acc:ZDB-GENE-040109-5]
100. rpl36 ENSDARG00000100588 196.69 1474.34 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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