Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s32.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 6253.24 46875.20
2. mt-atp6 ENSDARG00000063911 3335.06 25000.10 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
3. tpma ENSDARG00000033683 3335.06 25000.10 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. ckmb ENSDARG00000040565 2501.29 18750.04 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mt-nd2 ENSDARG00000063899 2501.29 18750.04 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 2084.41 15625.04 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. mt-co3 ENSDARG00000063912 2084.41 15625.04 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
8. acta1b ENSDARG00000055618 1667.53 12500.05 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
9. actb1 ENSDARG00000037746, ENSDARG00000113649 1667.53 12500.05 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
10. actb2 ENSDARG00000037870 1667.53 12500.05 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. apoc1l apoc1l 1667.53 12500.05
12. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 1667.53 12500.05 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
13. mt-co2 ENSDARG00000063908 1667.53 12500.05 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
14. actc1b ENSDARG00000099197 1250.65 9375.06 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
15. atp2a1 ENSDARG00000020574 1250.65 9375.06 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. eef1a1l1 ENSDARG00000020850 1250.65 9375.06 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1250.65 9375.06 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
18. rpl36a ENSDARG00000058105, ENSDARG00000112656 1250.65 9375.06 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
19. si:dkey-151g10.6 si:dkey-151g10.6 1250.65 9375.06
20. tmsb4x ENSDARG00000077777 1250.65 9375.06 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
21. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1250.65 9375.06 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
22. tnni2a.4 ENSDARG00000029069 1250.65 9375.06 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
23. BX511252.1 BX511252.1 833.76 6249.99
24. h3f3d ENSDARG00000045248 833.76 6249.99 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
25. kif5aa ENSDARG00000098936 833.76 6249.99 kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
26. mt-cyb ENSDARG00000063924 833.76 6249.99 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. mylz3 ENSDARG00000017441 833.76 6249.99 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
28. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 833.76 6249.99 NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
29. rbm4.3 ENSDARG00000022129 833.76 6249.99 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
30. rpl23 ENSDARG00000053457 833.76 6249.99 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
31. rpl5a ENSDARG00000020197 833.76 6249.99 ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
32. rpn1 ENSDARG00000059323 833.76 6249.99 ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
33. rps27.2 ENSDARG00000055475 833.76 6249.99 ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
34. spna2 833.76 6249.99 spectrin alpha 2, transcript variant X12
35. uqcrq ENSDARG00000029064, ENSDARG00000116372 833.76 6249.99 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
36. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 833.76 6249.99 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
37. zbtb18 ENSDARG00000028228 833.76 6249.99 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
38. zgc:112425 zgc:112425 833.76 6249.99
39. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 833.76 6249.99 zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
40. AP2A1 ENSDARG00000054320 416.88 3124.99 adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
41. ARHGAP35 416.88 3124.99 Rho GTPase activating protein 35b, transcript variant X2
42. ATP5B 416.88 3124.99 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
43. C20H2orf44 C20H2orf44 416.88 3124.99
44. CABZ01075242.1_1 ENSDARG00000114227 416.88 3124.99
45. CABZ01111496.1 ENSDARG00000003041 416.88 3124.99 E3 ubiquitin-protein ligase pellino homolog 2-like [Source:NCBI gene;Acc:100334245]
46. CAMK2G CAMK2G 416.88 3124.99
47. CR388132.2 ENSDARG00000104041 416.88 3124.99
48. CU457815.1 ENSDARG00000115823 416.88 3124.99 ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
49. GPANK1 ENSDARG00000053995 416.88 3124.99 G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
50. HRC ENSDARG00000045947 416.88 3124.99 histidine rich calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041008-189]
51. ROMO1 ENSDARG00000038076 416.88 3124.99 reactive oxygen species modulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1768]
52. SH3BGRL ENSDARG00000058302 416.88 3124.99 SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
53. SLC29A4 ENSDARG00000059690 416.88 3124.99 solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
54. SYNPO2L SYNPO2L 416.88 3124.99
55. TNRC18 ENSDARG00000077052 416.88 3124.99 trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
56. TNRC6C_1 TNRC6C_1 416.88 3124.99
57. TUBB8P7 TUBB8P7 416.88 3124.99
58. USP31 ENSDARG00000074017 416.88 3124.99 ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
59. ZNF462 ENSDARG00000112909 416.88 3124.99 zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
60. actn3a ENSDARG00000013755, ENSDARG00000111128 416.88 3124.99 actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
61. adssl ENSDARG00000012399 416.88 3124.99 adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
62. ak1 ENSDARG00000001950 416.88 3124.99 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
63. alas2 ENSDARG00000038643, ENSDARG00000113125 416.88 3124.99 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
64. aldoaa ENSDARG00000011665 416.88 3124.99 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
65. aldoab ENSDARG00000034470 416.88 3124.99 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
66. aldob ENSDARG00000053684 416.88 3124.99 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
67. anxa1c ENSDARG00000104359 416.88 3124.99 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
68. apoa4 apoa4 416.88 3124.99
69. apobb apobb 416.88 3124.99
70. apobec2a ENSDARG00000018881 416.88 3124.99 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
71. apoc2 ENSDARG00000092155 416.88 3124.99 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
72. arf6b ENSDARG00000052928 416.88 3124.99 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
73. arl8a ENSDARG00000078686 416.88 3124.99 ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
74. arpc3 ENSDARG00000057882 416.88 3124.99 actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
75. arrdc3a ENSDARG00000052690 416.88 3124.99 arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
76. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 416.88 3124.99 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
77. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 416.88 3124.99 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
78. azin1b ENSDARG00000035869, ENSDARG00000115647 416.88 3124.99 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
79. bhmt ENSDARG00000013430 416.88 3124.99 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
80. capns1b ENSDARG00000013804 416.88 3124.99 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
81. cct2 ENSDARG00000087206, ENSDARG00000104674 416.88 3124.99 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
82. cct5 ENSDARG00000045399 416.88 3124.99 chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
83. cd164 ENSDARG00000013628 416.88 3124.99 CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
84. cd276 ENSDARG00000003061 416.88 3124.99 CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
85. cd81 cd81 416.88 3124.99
86. cdh1 ENSDARG00000102750 416.88 3124.99 cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
87. cldn1 ENSDARG00000040045 416.88 3124.99 claudin 1 [Source:ZFIN;Acc:ZDB-GENE-010328-11]
88. col11a1a ENSDARG00000026165, ENSDARG00000115341 416.88 3124.99 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
89. col1a1a ENSDARG00000012405, ENSDARG00000116113 416.88 3124.99 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
90. col1a1b ENSDARG00000035809 416.88 3124.99 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
91. col1a2 ENSDARG00000020007 416.88 3124.99 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
92. cox4i1 ENSDARG00000032970 416.88 3124.99 cytochrome c oxidase subunit 4I1 [Source:ZFIN;Acc:ZDB-GENE-030131-5175]
93. ctdsp1 ENSDARG00000040674 416.88 3124.99 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
94. ctnnb1 ENSDARG00000014571 416.88 3124.99 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
95. ctsba ENSDARG00000055120 416.88 3124.99 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
96. cux2b ENSDARG00000086345 416.88 3124.99 cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
97. degs1 ENSDARG00000007347 416.88 3124.99 delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
98. dkk2 ENSDARG00000076420 416.88 3124.99 dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
99. dnajc8 ENSDARG00000059373 416.88 3124.99 DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
100. dpy30 ENSDARG00000004427 416.88 3124.99 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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