Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s31.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 6271.05 47008.36
2. apobb apobb 3420.57 25640.90
3. krt4 ENSDARG00000017624, ENSDARG00000115790 3420.57 25640.90 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 3420.57 25640.90 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. ckma ENSDARG00000035327, ENSDARG00000114671 2850.48 21367.46 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. ckmb ENSDARG00000040565 2850.48 21367.46 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
7. mt-co3 ENSDARG00000063912 2850.48 21367.46 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
8. tpma ENSDARG00000033683 2850.48 21367.46 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
9. mt-atp6 ENSDARG00000063911 2280.38 17093.94 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
10. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2280.38 17093.94 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
11. pcna ENSDARG00000054155 2280.38 17093.94 proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
12. apoc1l apoc1l 1710.29 12820.49
13. mt-co2 ENSDARG00000063908 1710.29 12820.49 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
14. mt-nd2 ENSDARG00000063899 1710.29 12820.49 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
15. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1710.29 12820.49 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
16. C18H12orf23 C18H12orf23 1140.19 8546.97
17. actc1b ENSDARG00000099197 1140.19 8546.97 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
18. apoa1a ENSDARG00000012076, ENSDARG00000110395 1140.19 8546.97 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
19. apoa2 ENSDARG00000015866 1140.19 8546.97 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
20. atp1a3a ENSDARG00000018259 1140.19 8546.97 ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
21. atp2a1 ENSDARG00000020574 1140.19 8546.97 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
22. atp5mf ENSDARG00000037867 1140.19 8546.97 ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
23. col1a2 ENSDARG00000020007 1140.19 8546.97 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
24. eef2b ENSDARG00000100371, ENSDARG00000109247 1140.19 8546.97 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
25. fabp3 ENSDARG00000023290 1140.19 8546.97 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
26. gapdh ENSDARG00000043457 1140.19 8546.97 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
27. kiaa0907 1140.19 8546.97 KIAA0907 protein, transcript variant X7
28. med1 ENSDARG00000075340 1140.19 8546.97 mediator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081104-257]
29. mt-co1 ENSDARG00000063905 1140.19 8546.97 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
30. rpl22l1 ENSDARG00000010244 1140.19 8546.97 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
31. rpl36 ENSDARG00000100588 1140.19 8546.97 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
32. si:ch211-226o13.2 1140.19 8546.97 si:ch211-226o13.2
33. tnni2a.4 ENSDARG00000029069 1140.19 8546.97 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
34. tp53 ENSDARG00000035559, ENSDARG00000115148 1140.19 8546.97 tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
35. ttna ttna 1140.19 8546.97
36. znf827 ENSDARG00000076171 1140.19 8546.97 zinc finger protein 827 [Source:ZFIN;Acc:ZDB-GENE-080728-3]
37. ACVR2B 570.10 4273.52 activin A receptor, type IIB
38. ATP5B 570.10 4273.52 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
39. BOLA2B BOLA2B 570.10 4273.52
40. CABZ01034848.1 CABZ01034848.1 570.10 4273.52
41. COX5B_1 ENSDARG00000015978 570.10 4273.52 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
42. G3BP2 ENSDARG00000014790 570.10 4273.52 GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
43. HECW1 HECW1 570.10 4273.52
44. HRC ENSDARG00000045947 570.10 4273.52 histidine rich calcium binding protein [Source:ZFIN;Acc:ZDB-GENE-041008-189]
45. LRIG3 ENSDARG00000079363 570.10 4273.52 leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
46. LURAP1 ENSDARG00000044406, ENSDARG00000115301 570.10 4273.52 leucine rich adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-35]
47. MAF1 ENSDARG00000013122 570.10 4273.52 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
48. PCBP4 ENSDARG00000024276 570.10 4273.52 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
49. TMEM255A ENSDARG00000073911 570.10 4273.52 transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
50. acta1b ENSDARG00000055618 570.10 4273.52 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
51. aldoab ENSDARG00000034470 570.10 4273.52 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
52. aldob ENSDARG00000053684 570.10 4273.52 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
53. alyref ENSDARG00000077732 570.10 4273.52 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
54. anxa11a ENSDARG00000077383 570.10 4273.52 annexin A11a [Source:ZFIN;Acc:ZDB-GENE-030707-4]
55. ap2s1 ENSDARG00000026967 570.10 4273.52 adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
56. aplp1 ENSDARG00000098368 570.10 4273.52 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
57. apoa4 apoa4 570.10 4273.52
58. arf6a ENSDARG00000101626 570.10 4273.52 ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
59. atp5g1 570.10 4273.52 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
60. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 570.10 4273.52 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
61. btbd3a ENSDARG00000005544 570.10 4273.52 BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
62. btf3 ENSDARG00000035400, ENSDARG00000116462 570.10 4273.52 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
63. bzw1a ENSDARG00000010481 570.10 4273.52 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
64. c8g ENSDARG00000032098 570.10 4273.52 complement component 8, gamma polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1898]
65. calm1b ENSDARG00000034187 570.10 4273.52 calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
66. caprin1a ENSDARG00000009346, ENSDARG00000112212 570.10 4273.52 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
67. capza1a ENSDARG00000034240 570.10 4273.52 capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
68. cd63 ENSDARG00000025147, ENSDARG00000115979 570.10 4273.52 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
69. cd81 cd81 570.10 4273.52
70. cebpg ENSDARG00000036073 570.10 4273.52 CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
71. cmpk ENSDARG00000019924 570.10 4273.52 cytidylate kinase [Source:ZFIN;Acc:ZDB-GENE-040426-2113]
72. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 570.10 4273.52 cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
73. dap3 ENSDARG00000078500 570.10 4273.52 death associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-051129-2]
74. dcaf17 ENSDARG00000074909 570.10 4273.52 ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
75. dhps ENSDARG00000003270 570.10 4273.52 deoxyhypusine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2001]
76. dlb ENSDARG00000004232 570.10 4273.52 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
77. dpy30 ENSDARG00000004427 570.10 4273.52 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
78. dtna ENSDARG00000031015 570.10 4273.52 dystrobrevin, alpha [Source:ZFIN;Acc:ZDB-GENE-070117-2]
79. eif4a1b ENSDARG00000003032, ENSDARG00000116907 570.10 4273.52 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
80. eif4g2b ENSDARG00000057167 570.10 4273.52 eukaryotic translation initiation factor 4, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6550]
81. gamt ENSDARG00000070844, ENSDARG00000109945 570.10 4273.52 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
82. gcdh gcdh 570.10 4273.52
83. gid8b ENSDARG00000037589 570.10 4273.52 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
84. her6 ENSDARG00000006514, ENSDARG00000111099 570.10 4273.52 hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
85. hif1ab ENSDARG00000034293 570.10 4273.52 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
86. hspa8 ENSDARG00000068992, ENSDARG00000114726 570.10 4273.52 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
87. icn2 ENSDARG00000055514 570.10 4273.52 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
88. ing4 ENSDARG00000030716 570.10 4273.52 inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
89. kpna2 ENSDARG00000038066 570.10 4273.52 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
90. ldhba ENSDARG00000019644 570.10 4273.52 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
91. map2k4b ENSDARG00000077177 570.10 4273.52 mitogen-activated protein kinase kinase 4b [Source:ZFIN;Acc:ZDB-GENE-080721-13]
92. mapk14b ENSDARG00000028721 570.10 4273.52 mitogen-activated protein kinase 14b [Source:ZFIN;Acc:ZDB-GENE-021007-1]
93. mt-nd1 ENSDARG00000063895 570.10 4273.52 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
94. mt-nd4 ENSDARG00000063917 570.10 4273.52 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
95. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 570.10 4273.52 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
96. myhz1.2 ENSDARG00000067995 570.10 4273.52 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
97. myhz1.3 ENSDARG00000067997 570.10 4273.52 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
98. mylz3 ENSDARG00000017441 570.10 4273.52 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
99. myoz1b ENSDARG00000071445 570.10 4273.52 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
100. ndufs3 ENSDARG00000015385 570.10 4273.52 NADH:ubiquinone oxidoreductase core subunit S3 [Source:ZFIN;Acc:ZDB-GENE-050417-274]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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