Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s30.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 5584.29 41860.38
2. actc1b ENSDARG00000099197 3722.86 27906.92 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
3. ckma ENSDARG00000035327, ENSDARG00000114671 3722.86 27906.92 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
4. ckmb ENSDARG00000040565 3722.86 27906.92 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 3722.86 27906.92 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 3102.38 23255.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. mt-atp6 ENSDARG00000063911 2481.90 18604.57 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
8. mt-nd1 ENSDARG00000063895 2481.90 18604.57 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
9. zgc:112425 zgc:112425 2481.90 18604.57
10. hmga1a ENSDARG00000028335 1861.43 13953.46 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
11. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 1861.43 13953.46 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
12. sncb ENSDARG00000104945 1861.43 13953.46 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
13. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1861.43 13953.46 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
14. tnni2a.4 ENSDARG00000029069 1861.43 13953.46 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
15. RPL37A RPL37A 1240.95 9302.28
16. acta1a ENSDARG00000036371 1240.95 9302.28 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
17. apoa1a ENSDARG00000012076, ENSDARG00000110395 1240.95 9302.28 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
18. apobb apobb 1240.95 9302.28
19. apoc1l apoc1l 1240.95 9302.28
20. atp2a1 ENSDARG00000020574 1240.95 9302.28 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
21. eef1a1l1 ENSDARG00000020850 1240.95 9302.28 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
22. krt18 ENSDARG00000018404, ENSDARG00000109528 1240.95 9302.28 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
23. mt-co1 ENSDARG00000063905 1240.95 9302.28 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
24. mt-co2 ENSDARG00000063908 1240.95 9302.28 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
25. mt-co3 ENSDARG00000063912 1240.95 9302.28 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
26. mt-cyb ENSDARG00000063924 1240.95 9302.28 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. mt-nd2 ENSDARG00000063899 1240.95 9302.28 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
28. mylpfb ENSDARG00000002589 1240.95 9302.28 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
29. ola1 ENSDARG00000044565 1240.95 9302.28 Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
30. pgam2 ENSDARG00000057571 1240.95 9302.28 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
31. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1240.95 9302.28 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
32. rpl11 ENSDARG00000043509 1240.95 9302.28 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
33. rpl38 ENSDARG00000006413 1240.95 9302.28 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
34. tmsb4x ENSDARG00000077777 1240.95 9302.28 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
35. tpma ENSDARG00000033683 1240.95 9302.28 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
36. zgc:153867 1240.95 9302.28 zgc:153867, transcript variant X2
37. C5H8orf4 C5H8orf4 620.48 4651.18
38. LGALS3 LGALS3 620.48 4651.18
39. NDUFB1 ENSDARG00000087456 620.48 4651.18 NADH:ubiquinone oxidoreductase subunit B1 [Source:HGNC Symbol;Acc:HGNC:7695]
40. NRD1 NRD1 620.48 4651.18
41. RPS17L RPS17L 620.48 4651.18
42. TATDN3 ENSDARG00000044072 620.48 4651.18 TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
43. ahnak ENSDARG00000061764 620.48 4651.18 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
44. akap1b ENSDARG00000006062 620.48 4651.18 A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
45. apoa2 ENSDARG00000015866 620.48 4651.18 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
46. asph ENSDARG00000055945 620.48 4651.18 aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
47. atp5a1 620.48 4651.18 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
48. atp5g1 620.48 4651.18 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
49. bloc1s6 ENSDARG00000042933 620.48 4651.18 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
50. btg1 ENSDARG00000027249 620.48 4651.18 B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
51. calm2a ENSDARG00000031427, ENSDARG00000111871 620.48 4651.18 calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
52. capns1b ENSDARG00000013804 620.48 4651.18 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
53. caspb ENSDARG00000052039 620.48 4651.18 caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
54. casq1a ENSDARG00000038716, ENSDARG00000116662 620.48 4651.18 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
55. ccdc124 ENSDARG00000043502 620.48 4651.18 coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
56. cd81 cd81 620.48 4651.18
57. cmn ENSDARG00000055527 620.48 4651.18 calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
58. cnnm2a ENSDARG00000061195 620.48 4651.18 cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
59. col1a1a ENSDARG00000012405, ENSDARG00000116113 620.48 4651.18 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
60. col1a1b ENSDARG00000035809 620.48 4651.18 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
61. cox8a ENSDARG00000095273 620.48 4651.18 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
62. ctns ENSDARG00000008890 620.48 4651.18 cystinosin, lysosomal cystine transporter [Source:ZFIN;Acc:ZDB-GENE-050522-352]
63. dnaja1l dnaja1l 620.48 4651.18
64. eif5a ENSDARG00000017235 620.48 4651.18 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
65. etf1 etf1 620.48 4651.18
66. fam32al fam32al 620.48 4651.18
67. fgb ENSDARG00000008969 620.48 4651.18 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
68. fmodb ENSDARG00000010294 620.48 4651.18 fibromodulin b [Source:ZFIN;Acc:ZDB-GENE-080327-28]
69. gch2 ENSDARG00000099101 620.48 4651.18 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
70. ggcx ENSDARG00000067805 620.48 4651.18 gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
71. gpd1a ENSDARG00000043701 620.48 4651.18 glycerol-3-phosphate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-050417-209]
72. gtf2f1 ENSDARG00000032129 620.48 4651.18 general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
73. hbae3 ENSDARG00000079305 620.48 4651.18 hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
74. hdac1 ENSDARG00000015427 620.48 4651.18 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
75. hhatlb ENSDARG00000005139 620.48 4651.18 hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
76. hint1 ENSDARG00000103824, ENSDARG00000110789 620.48 4651.18 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
77. hmgn2 ENSDARG00000099572 620.48 4651.18 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
78. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 620.48 4651.18 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
79. inab ENSDARG00000053248 620.48 4651.18 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
80. lmf2b ENSDARG00000025859, ENSDARG00000115591 620.48 4651.18 lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
81. loxl3b ENSDARG00000039563 620.48 4651.18 lysyl oxidase-like 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8210]
82. map2k6 ENSDARG00000099184 620.48 4651.18 mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
83. marcksb ENSDARG00000008803 620.48 4651.18 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
84. mef2ca ENSDARG00000029764 620.48 4651.18 myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
85. mt-nd4 ENSDARG00000063917 620.48 4651.18 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
86. mtch2 ENSDARG00000019732 620.48 4651.18 mitochondrial carrier homolog 2 [Source:ZFIN;Acc:ZDB-GENE-991008-9]
87. myhz1.3 ENSDARG00000067997 620.48 4651.18 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
88. myl10 ENSDARG00000062592 620.48 4651.18 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
89. myoz1a ENSDARG00000056209, ENSDARG00000115885 620.48 4651.18 myozenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1875]
90. ndufs2 ENSDARG00000007526 620.48 4651.18 NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
91. nf2a ENSDARG00000020204 620.48 4651.18 neurofibromin 2a (merlin) [Source:ZFIN;Acc:ZDB-GENE-080722-7]
92. nop56 ENSDARG00000012820 620.48 4651.18 NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
93. nup133 ENSDARG00000010078 620.48 4651.18 nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
94. p4ha1b ENSDARG00000071082, ENSDARG00000112774 620.48 4651.18 prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
95. p4hb ENSDARG00000105116, ENSDARG00000116847 620.48 4651.18 prolyl 4-hydroxylase, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-080610-1]
96. pah ENSDARG00000020143 620.48 4651.18 phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
97. pgm1 ENSDARG00000013561 620.48 4651.18 phosphoglucomutase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1245]
98. phf23b ENSDARG00000036305 620.48 4651.18 PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
99. psmb6 ENSDARG00000002240 620.48 4651.18 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
100. ptmaa ENSDARG00000021113, ENSDARG00000110479 620.48 4651.18 prothymosin alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-7647]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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