Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s27.

Sample reads: 133,403. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 7696.29 57692.16
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4489.50 33653.74 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 3848.15 28846.12 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
4. apoc1l apoc1l 2565.43 19230.72
5. mt-co2 ENSDARG00000063908 2565.43 19230.72 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
6. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2565.43 19230.72 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
7. tpma ENSDARG00000033683 2565.43 19230.72 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. BX511252.1 BX511252.1 1924.07 14423.02
9. actb2 ENSDARG00000037870 1924.07 14423.02 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. apoa2 ENSDARG00000015866 1924.07 14423.02 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
11. apobb apobb 1924.07 14423.02
12. ckmb ENSDARG00000040565 1924.07 14423.02 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
13. eef2b ENSDARG00000100371, ENSDARG00000109247 1924.07 14423.02 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
14. mt-atp6 ENSDARG00000063911 1924.07 14423.02 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
15. tpm3 ENSDARG00000005162 1924.07 14423.02 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
16. ATP5B 1282.72 9615.40 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
17. NDUFB2 ENSDARG00000045490 1282.72 9615.40 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
18. acta1b ENSDARG00000055618 1282.72 9615.40 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
19. actb1 ENSDARG00000037746, ENSDARG00000113649 1282.72 9615.40 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
20. actc1b ENSDARG00000099197 1282.72 9615.40 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
21. apoeb ENSDARG00000040295 1282.72 9615.40 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
22. ckma ENSDARG00000035327, ENSDARG00000114671 1282.72 9615.40 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
23. gapdh ENSDARG00000043457 1282.72 9615.40 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
24. gcn1l1 gcn1l1 1282.72 9615.40
25. mt-nd1 ENSDARG00000063895 1282.72 9615.40 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
26. myl1 ENSDARG00000014196 1282.72 9615.40 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
27. rps16 ENSDARG00000045487 1282.72 9615.40 ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
28. rps20 ENSDARG00000036044 1282.72 9615.40 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
29. tnni2a.4 ENSDARG00000029069 1282.72 9615.40 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
30. zgc:92533 zgc:92533 1282.72 9615.40
31. ABHD12B ABHD12B 641.36 4807.70
32. APOB APOB 641.36 4807.70
33. CCNA2 ENSDARG00000011094 641.36 4807.70 cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
34. CR388095.3 CR388095.3 641.36 4807.70
35. CR847934.1 CR847934.1 641.36 4807.70
36. CU914813.1 CU914813.1 641.36 4807.70
37. FAT1 FAT1 641.36 4807.70
38. FP067396.1 FP067396.1 641.36 4807.70
39. LMLN ENSDARG00000061265 641.36 4807.70 leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
40. PREX2 ENSDARG00000071692 641.36 4807.70 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
41. RPL29 ENSDARG00000077717 641.36 4807.70 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
42. SNORD33 SNORD33 641.36 4807.70
43. SNORD72 SNORD72 641.36 4807.70
44. TSG101 TSG101 641.36 4807.70
45. ahcy ENSDARG00000005191 641.36 4807.70 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
46. alcamb ENSDARG00000058538 641.36 4807.70 activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
47. aldh7a1 ENSDARG00000018426 641.36 4807.70 aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
48. aldoab ENSDARG00000034470 641.36 4807.70 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
49. aldob ENSDARG00000053684 641.36 4807.70 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
50. apoa1a ENSDARG00000012076, ENSDARG00000110395 641.36 4807.70 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
51. arf2 arf2 641.36 4807.70
52. atp2a1 ENSDARG00000020574 641.36 4807.70 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
53. atp5c1 641.36 4807.70 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
54. atp5g1 641.36 4807.70 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
55. atp5h 641.36 4807.70 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
56. atp5l ENSDARG00000011841 641.36 4807.70 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [Source:ZFIN;Acc:ZDB-GENE-030131-5177]
57. atp6ap1b ENSDARG00000037153 641.36 4807.70 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
58. capns1a ENSDARG00000035329 641.36 4807.70 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
59. ccni ENSDARG00000068214 641.36 4807.70 cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
60. cenpf ENSDARG00000055133 641.36 4807.70 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
61. col1a1a ENSDARG00000012405, ENSDARG00000116113 641.36 4807.70 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
62. col9a1 col9a1 641.36 4807.70
63. cx44.1 cx44.1 641.36 4807.70
64. dct ENSDARG00000006008 641.36 4807.70 dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
65. desma ENSDARG00000058656 641.36 4807.70 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
66. dnaja2 ENSDARG00000104066 641.36 4807.70 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
67. eif5a ENSDARG00000017235 641.36 4807.70 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
68. eif5a2 ENSDARG00000056186 641.36 4807.70 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
69. fam160a1 fam160a1 641.36 4807.70
70. hbbe1.1 ENSDARG00000113599 641.36 4807.70 hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
71. hbbe2 ENSDARG00000045143, ENSDARG00000109554 641.36 4807.70 hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
72. hmga1a ENSDARG00000028335 641.36 4807.70 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
73. hoxc10a ENSDARG00000070348 641.36 4807.70 homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
74. hsp90ab1 ENSDARG00000029150 641.36 4807.70 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
75. icn2 ENSDARG00000055514 641.36 4807.70 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
76. ilf2 ENSDARG00000014591 641.36 4807.70 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
77. ist1 ENSDARG00000051888 641.36 4807.70 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
78. jagn1b ENSDARG00000014995 641.36 4807.70 jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
79. krt8 ENSDARG00000058358, ENSDARG00000109279 641.36 4807.70 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
80. lepre1 lepre1 641.36 4807.70
81. lfng ENSDARG00000037879 641.36 4807.70 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
82. lhfpl2b_1 ENSDARG00000098153 641.36 4807.70 LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
83. marcksl1a ENSDARG00000039034 641.36 4807.70 MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
84. mat1a ENSDARG00000039605, ENSDARG00000115975 641.36 4807.70 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
85. msna ENSDARG00000058128, ENSDARG00000114614 641.36 4807.70 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
86. mt-co1 ENSDARG00000063905 641.36 4807.70 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
87. mt-co3 ENSDARG00000063912 641.36 4807.70 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
88. mt-cyb ENSDARG00000063924 641.36 4807.70 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
89. mt-nd4 ENSDARG00000063917 641.36 4807.70 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
90. myh10 ENSDARG00000000103 641.36 4807.70 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
91. mylz3 ENSDARG00000017441 641.36 4807.70 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
92. ncl ENSDARG00000002710 641.36 4807.70 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
93. ndufs5 ENSDARG00000006290 641.36 4807.70 NADH:ubiquinone oxidoreductase subunit S5 [Source:ZFIN;Acc:ZDB-GENE-050522-437]
94. oafa ENSDARG00000075851 641.36 4807.70 OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
95. ostc ENSDARG00000104901 641.36 4807.70 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
96. pcif1 ENSDARG00000099084 641.36 4807.70 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
97. pdlim5b ENSDARG00000027600 641.36 4807.70 PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
98. pinx1 ENSDARG00000023532 641.36 4807.70 PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
99. pla2g12b ENSDARG00000015662 641.36 4807.70 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
100. plagl2 ENSDARG00000076657 641.36 4807.70 pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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