Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s22.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 11039.14 82755.33 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 6910.37 51803.85
3. apoa1b ENSDARG00000101324 3387.01 25390.85 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. tmsb4x ENSDARG00000077777 3327.01 24941.05 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
5. apoc1l apoc1l 2847.05 21343.02
6. actb2 ENSDARG00000037870 2825.24 21179.52 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. actb1 ENSDARG00000037746, ENSDARG00000113649 2290.73 17172.54 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
8. apobb apobb 2241.64 16804.54
9. apoa2 ENSDARG00000015866 2056.20 15414.38 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. apoeb ENSDARG00000040295 1979.85 14842.02 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
11. zgc:161979 zgc:161979 1183.54 8872.45
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1107.19 8300.09 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. zgc:161979_1 zgc:161979_1 1101.73 8259.16
14. col1a1a ENSDARG00000012405, ENSDARG00000116113 894.48 6705.50 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
15. cfl1l ENSDARG00000012972 861.75 6460.14 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
16. eef1a1l1 ENSDARG00000020850 741.76 5560.63 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. mt-nd2 ENSDARG00000063899 719.94 5397.06 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
18. icn ENSDARG00000009978 714.49 5356.20 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
19. mt-co2 ENSDARG00000063908 709.04 5315.34 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
20. mt-nd4 ENSDARG00000063917 621.77 4661.12 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
21. apoa4 apoa4 594.50 4456.69
22. pfn1 ENSDARG00000088091 556.32 4170.47 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
23. ctsla ENSDARG00000007836 550.87 4129.62 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
24. si:dkey-151g10.6 si:dkey-151g10.6 539.96 4047.83
25. zgc:92533 zgc:92533 534.50 4006.90
26. cyt1l ENSDARG00000036832 529.05 3966.04 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
27. rbp4 ENSDARG00000101199 529.05 3966.04 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
28. hmga1a ENSDARG00000028335 474.51 3557.18 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
29. mt-atp6 ENSDARG00000063911 452.69 3393.61 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
30. mt-co3 ENSDARG00000063912 419.97 3148.32 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
31. zgc:153129 zgc:153129 419.97 3148.32
32. zgc:165571 zgc:165571 398.15 2984.75
33. ptmab ENSDARG00000101766 370.88 2780.32 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
34. mt-cyb ENSDARG00000063924 365.43 2739.46 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 354.52 2657.67 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
36. icn2 ENSDARG00000055514 349.06 2616.74 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
37. AC024175.17 AC024175.17 343.61 2575.89
38. myl12.1 ENSDARG00000099766 343.61 2575.89 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
39. krt8 ENSDARG00000058358, ENSDARG00000109279 338.16 2535.03 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
40. zgc:113413 zgc:113413 338.16 2535.03
41. rpl10a ENSDARG00000042905, ENSDARG00000115649 332.70 2494.10 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
42. apoc2 ENSDARG00000092155 327.25 2453.24 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
43. bhmt ENSDARG00000013430 327.25 2453.24 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
44. ppiaa ENSDARG00000009212 321.79 2412.31 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
45. hspa8 ENSDARG00000068992, ENSDARG00000114726 316.34 2371.45 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
46. btf3 ENSDARG00000035400, ENSDARG00000116462 305.43 2289.67 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
47. APOB APOB 299.98 2248.81
48. FP067396.1 FP067396.1 299.98 2248.81
49. zgc:112425 zgc:112425 289.07 2167.02
50. eef2b ENSDARG00000100371, ENSDARG00000109247 278.16 2085.24 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
51. rpl23 ENSDARG00000053457 272.71 2044.38 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
52. rplp1 ENSDARG00000021864 272.71 2044.38 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
53. slc43a2b ENSDARG00000061120, ENSDARG00000117188 267.25 2003.45 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
54. capns1b ENSDARG00000013804 256.34 1921.66 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
55. mt-nd1 ENSDARG00000063895 239.98 1799.02 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
56. rpl26 ENSDARG00000102317 239.98 1799.02 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
57. rpl36 ENSDARG00000100588 234.53 1758.16 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
58. rpl8 ENSDARG00000014867 234.53 1758.16 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
59. rps23 ENSDARG00000021838 234.53 1758.16 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
60. rpl11 ENSDARG00000043509 229.07 1717.23 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
61. s100a10b ENSDARG00000025254 229.07 1717.23 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
62. si:ch211-157c3.4 ENSDARG00000087093 229.07 1717.23 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
63. rplp2 ENSDARG00000101406 223.62 1676.38 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
64. rpl9 ENSDARG00000037350, ENSDARG00000112384 218.16 1635.44 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
65. pabpc1a ENSDARG00000017219 212.71 1594.59 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
66. pvalb9 ENSDARG00000071601, ENSDARG00000113946 212.71 1594.59 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
67. rpl21 ENSDARG00000010516, ENSDARG00000110263 212.71 1594.59 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
68. fetub ENSDARG00000053973 207.26 1553.73 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
69. frem2a ENSDARG00000076856 207.26 1553.73 Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
70. tfa ENSDARG00000016771 207.26 1553.73 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
71. APOA4 APOA4 196.35 1471.95
72. ahcy ENSDARG00000005191 196.35 1471.95 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
73. and1 ENSDARG00000088514 196.35 1471.95 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
74. dbi ENSDARG00000026369 196.35 1471.95 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
75. mt-co1 ENSDARG00000063905 196.35 1471.95 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
76. rpl27 ENSDARG00000015128 196.35 1471.95 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
77. rps27a ENSDARG00000032725, ENSDARG00000114059 196.35 1471.95 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
78. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 190.89 1431.01 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
79. ahnak ENSDARG00000061764 185.44 1390.16 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
80. fkbp1aa ENSDARG00000022684 185.44 1390.16 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
81. hmgn2 ENSDARG00000099572 185.44 1390.16 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
82. im:7150988 ENSDARG00000109310 185.44 1390.16 im:7150988 [Source:ZFIN;Acc:ZDB-GENE-050309-169]
83. rpl7 ENSDARG00000007320 185.44 1390.16 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
84. arpc2 ENSDARG00000075989 179.99 1349.30 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
85. fn1b ENSDARG00000006526 179.99 1349.30 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
86. rps15a ENSDARG00000010160 179.99 1349.30 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
87. rps2 ENSDARG00000077291 179.99 1349.30 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
88. pla2g12b ENSDARG00000015662 174.53 1308.37 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
89. rpl19 ENSDARG00000013307 174.53 1308.37 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
90. sepp1a 174.53 1308.37 selenoprotein P, plasma, 1a
91. AL954137.2 ENSDARG00000114408 169.08 1267.51
92. myh9a ENSDARG00000063295 169.08 1267.51 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
93. rps14 ENSDARG00000036629 169.08 1267.51 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
94. rps5 ENSDARG00000043453 169.08 1267.51 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
95. col18a1 col18a1 163.62 1226.58
96. cotl1 ENSDARG00000026829 163.62 1226.58 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
97. gamt ENSDARG00000070844, ENSDARG00000109945 163.62 1226.58 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
98. id1 ENSDARG00000040764 163.62 1226.58 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
99. rpl5b ENSDARG00000015862, ENSDARG00000109661 163.62 1226.58 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
100. rps27.1 ENSDARG00000023298 163.62 1226.58 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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