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Experiment Zebrafish_40hpf_trunk2, section s21.

Sample reads: 133,398. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 13453.17 100849.71
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7913.80 59324.64 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 5869.70 44001.34 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 5141.29 38540.92
5. apobb apobb 3636.45 27260.11
6. apoa2 ENSDARG00000015866 3591.28 26921.50 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
7. apoeb ENSDARG00000040295 2950.38 22117.09 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 2557.94 19175.22 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. zgc:161979 zgc:161979 1990.45 14921.12
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 1832.34 13735.87 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. zgc:161979_1 zgc:161979_1 1801.29 13503.11
12. actb2 ENSDARG00000037870 1753.29 13143.28 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1417.31 10624.66 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. apoa4 apoa4 1050.28 7873.27
15. ctsla ENSDARG00000007836 982.52 7365.32 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. eef1a1l1 ENSDARG00000020850 691.72 5185.38 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
17. bhmt ENSDARG00000013430 581.61 4359.95 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
18. mt-nd2 ENSDARG00000063899 573.14 4296.46 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. rbp4 ENSDARG00000101199 567.49 4254.11 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
20. zgc:153129 zgc:153129 539.26 4042.48
21. mt-co2 ENSDARG00000063908 536.43 4021.27 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
22. apoc2 ENSDARG00000092155 527.96 3957.77 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
23. cfl1l ENSDARG00000012972 519.49 3894.28 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
24. mt-co3 ENSDARG00000063912 457.38 3428.68 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
25. mt-nd4 ENSDARG00000063917 451.73 3386.33 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
26. APOB APOB 437.62 3280.55
27. col1a1a ENSDARG00000012405, ENSDARG00000116113 415.03 3111.21 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
28. zgc:92533 zgc:92533 412.21 3090.07
29. pfn1 ENSDARG00000088091 409.38 3068.86 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
30. fetub ENSDARG00000053973 389.62 2920.73 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
31. mt-cyb ENSDARG00000063924 389.62 2920.73 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
32. ahcy ENSDARG00000005191 383.97 2878.37 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
33. mt-atp6 ENSDARG00000063911 378.33 2836.10 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
34. si:dkey-151g10.6 si:dkey-151g10.6 375.50 2814.88
35. icn ENSDARG00000009978 367.03 2751.39 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
36. slc43a2b ENSDARG00000061120, ENSDARG00000117188 358.56 2687.89 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
37. APOA4 APOA4 341.62 2560.90
38. tfa ENSDARG00000016771 338.80 2539.76 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
39. cyt1l ENSDARG00000036832 327.51 2455.13 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
40. zgc:113413 zgc:113413 321.86 2412.78
41. pla2g12b ENSDARG00000015662 319.04 2391.64 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
42. pvalb9 ENSDARG00000071601, ENSDARG00000113946 313.39 2349.28 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
43. sepp1a 313.39 2349.28 selenoprotein P, plasma, 1a
44. gamt ENSDARG00000070844, ENSDARG00000109945 302.10 2264.65 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
45. aldob ENSDARG00000053684 279.51 2095.31 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
46. myl12.1 ENSDARG00000099766 265.39 1989.46 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
47. paics ENSDARG00000033539 262.57 1968.32 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
48. ppiaa ENSDARG00000009212 262.57 1968.32 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
49. hmga1a ENSDARG00000028335 259.75 1947.18 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
50. eef2b ENSDARG00000100371, ENSDARG00000109247 251.28 1883.68 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
51. pabpc1a ENSDARG00000017219 234.34 1756.70 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
52. fabp2 ENSDARG00000006427, ENSDARG00000110230 228.69 1714.34 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
53. krt8 ENSDARG00000058358, ENSDARG00000109279 228.69 1714.34 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
54. apoea ENSDARG00000102004 217.40 1629.71 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
55. mthfd1l ENSDARG00000042221, ENSDARG00000110473 217.40 1629.71 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
56. zgc:136410 ENSDARG00000102241 214.57 1608.49 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
57. fbp1b ENSDARG00000020364, ENSDARG00000111266 211.75 1587.35 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
58. rpl23 ENSDARG00000053457 203.28 1523.86 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
59. rpl10a ENSDARG00000042905, ENSDARG00000115649 200.46 1502.72 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
60. prps1a ENSDARG00000015524 194.81 1460.36 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
61. dbi ENSDARG00000026369 189.16 1418.01 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
62. btf3 ENSDARG00000035400, ENSDARG00000116462 183.52 1375.73 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
63. hspa8 ENSDARG00000068992, ENSDARG00000114726 183.52 1375.73 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
64. mat1a ENSDARG00000039605, ENSDARG00000115975 183.52 1375.73 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
65. tpma ENSDARG00000033683 183.52 1375.73 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
66. capns1b ENSDARG00000013804 180.69 1354.52 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
67. npc2 ENSDARG00000090912 180.69 1354.52 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
68. gapdh ENSDARG00000043457 175.05 1312.24 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
69. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 175.05 1312.24 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
70. FP067396.1 FP067396.1 172.22 1291.02
71. mt-co1 ENSDARG00000063905 172.22 1291.02 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
72. zgc:112425 zgc:112425 172.22 1291.02
73. hdlbp hdlbp 169.40 1269.88
74. fgg ENSDARG00000037281, ENSDARG00000114705 166.58 1248.74 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
75. icn2 ENSDARG00000055514 163.75 1227.53 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
76. rpl26 ENSDARG00000102317 163.75 1227.53 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
77. ldhba ENSDARG00000019644 158.11 1185.25 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
78. mt-nd1 ENSDARG00000063895 158.11 1185.25 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
79. nt5c3a ENSDARG00000058597 158.11 1185.25 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
80. ctsba ENSDARG00000055120 155.28 1164.03 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
81. col1a1b ENSDARG00000035809 152.46 1142.89 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
82. fgb ENSDARG00000008969 152.46 1142.89 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
83. s100a10b ENSDARG00000025254 152.46 1142.89 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
84. cox8a ENSDARG00000095273 149.64 1121.75 cytochrome c oxidase subunit 8A [Source:ZFIN;Acc:ZDB-GENE-030131-9136]
85. gatm ENSDARG00000036239 149.64 1121.75 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
86. myh9a ENSDARG00000063295 149.64 1121.75 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
87. psap ENSDARG00000013968 149.64 1121.75 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
88. ptmab ENSDARG00000101766 149.64 1121.75 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
89. rplp1 ENSDARG00000021864 149.64 1121.75 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
90. serpina1 ENSDARG00000090286 149.64 1121.75 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
91. dao.1 ENSDARG00000035602 143.99 1079.40 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
92. CU914813.1 CU914813.1 141.17 1058.26
93. acp5a ENSDARG00000019763, ENSDARG00000111996 141.17 1058.26 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
94. ckmt1 ENSDARG00000016598, ENSDARG00000113143 141.17 1058.26 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
95. rpl11 ENSDARG00000043509 141.17 1058.26 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
96. rpl36a ENSDARG00000058105, ENSDARG00000112656 141.17 1058.26 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
97. rps5 ENSDARG00000043453 141.17 1058.26 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
98. hsp90ab1 ENSDARG00000029150 138.34 1037.05 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
99. rpl21 ENSDARG00000010516, ENSDARG00000110263 138.34 1037.05 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
100. rpl8 ENSDARG00000014867 138.34 1037.05 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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