Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s19.

Sample reads: 133,386. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 9793.43 73421.67 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. apoa1b ENSDARG00000101324 5841.28 43792.27 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
3. apoc1l apoc1l 5431.28 40718.49
4. apoa2 ENSDARG00000015866 4751.40 35621.40 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. AC024175.4 AC024175.4 4450.38 33364.65
6. apobb apobb 3544.73 26574.96
7. apoeb ENSDARG00000040295 3207.39 24045.91 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 2483.39 18618.06 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. zgc:161979 zgc:161979 1966.99 14746.59
10. actb2 ENSDARG00000037870 1858.00 13929.49 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
11. apoa1a ENSDARG00000012076, ENSDARG00000110395 1842.43 13812.76 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
12. zgc:161979_1 zgc:161979_1 1598.50 11984.01
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1383.12 10369.30 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. apoa4 apoa4 1006.85 7548.39
15. ctsla ENSDARG00000007836 993.87 7451.08 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. mt-co2 ENSDARG00000063908 986.09 7392.75 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
17. rbp4 ENSDARG00000101199 843.37 6322.77 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
18. cfl1l ENSDARG00000012972 640.96 4805.30 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
19. apoc2 ENSDARG00000092155 638.36 4785.81 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
20. bhmt ENSDARG00000013430 638.36 4785.81 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
21. mt-co3 ENSDARG00000063912 638.36 4785.81 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. mt-atp6 ENSDARG00000063911 635.77 4766.39 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
23. col1a1a ENSDARG00000012405, ENSDARG00000116113 625.39 4688.57 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
24. mt-nd2 ENSDARG00000063899 622.79 4669.08 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
25. zgc:153129 zgc:153129 594.25 4455.11
26. eef1a1l1 ENSDARG00000020850 534.56 4007.61 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
27. mt-cyb ENSDARG00000063924 534.56 4007.61 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. pvalb9 ENSDARG00000071601, ENSDARG00000113946 487.85 3657.43 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
29. pfn1 ENSDARG00000088091 474.88 3560.19 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
30. cyt1l ENSDARG00000036832 467.10 3501.86 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
31. icn ENSDARG00000009978 459.31 3443.46 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
32. APOB APOB 435.96 3268.41
33. mt-nd4 ENSDARG00000063917 430.77 3229.50 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
34. zgc:92533 zgc:92533 422.98 3171.10
35. APOA4 APOA4 415.20 3112.77
36. slc43a2b ENSDARG00000061120, ENSDARG00000117188 381.46 2859.82 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
37. si:dkey-151g10.6 si:dkey-151g10.6 378.87 2840.40
38. gamt ENSDARG00000070844, ENSDARG00000109945 371.08 2782.00 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
39. tfa ENSDARG00000016771 368.49 2762.58 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
40. zgc:113413 zgc:113413 360.70 2704.18
41. sepp1a 332.16 2490.21 selenoprotein P, plasma, 1a
42. ahcy ENSDARG00000005191 329.56 2470.72 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
43. rpl23 ENSDARG00000053457 324.37 2431.81 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
44. fabp2 ENSDARG00000006427, ENSDARG00000110230 319.18 2392.90 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
45. aldob ENSDARG00000053684 316.59 2373.49 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
46. rpl10a ENSDARG00000042905, ENSDARG00000115649 308.80 2315.08 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
47. hmga1a ENSDARG00000028335 301.02 2256.76 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
48. mt-co1 ENSDARG00000063905 282.85 2120.54 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. apoea ENSDARG00000102004 275.07 2062.21 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
50. hspa8 ENSDARG00000068992, ENSDARG00000114726 272.47 2042.72 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
51. pla2g12b ENSDARG00000015662 272.47 2042.72 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
52. ppiaa ENSDARG00000009212 269.88 2023.30 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
53. dbi ENSDARG00000026369 264.69 1984.39 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
54. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 251.71 1887.08 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
55. eef2b ENSDARG00000100371, ENSDARG00000109247 249.12 1867.66 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
56. pabpc1a ENSDARG00000017219 249.12 1867.66 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
57. paics ENSDARG00000033539 249.12 1867.66 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
58. krt8 ENSDARG00000058358, ENSDARG00000109279 243.93 1828.75 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
59. rps23 ENSDARG00000021838 243.93 1828.75 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
60. icn2 ENSDARG00000055514 238.74 1789.84 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
61. mt-nd1 ENSDARG00000063895 238.74 1789.84 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
62. ptmab ENSDARG00000101766 238.74 1789.84 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
63. myl12.1 ENSDARG00000099766 223.17 1673.11 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
64. myh9a ENSDARG00000063295 215.38 1614.71 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
65. rpl8 ENSDARG00000014867 215.38 1614.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
66. fetub ENSDARG00000053973 212.79 1595.29 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
67. rpl11 ENSDARG00000043509 210.19 1575.80 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
68. npc2 ENSDARG00000090912 207.60 1556.38 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
69. nt5c3a ENSDARG00000058597 205.00 1536.89 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
70. rpl36a ENSDARG00000058105, ENSDARG00000112656 197.22 1478.56 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
71. zgc:112425 zgc:112425 197.22 1478.56
72. acp5a ENSDARG00000019763, ENSDARG00000111996 194.62 1459.07 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
73. rplp1 ENSDARG00000021864 194.62 1459.07 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
74. btf3 ENSDARG00000035400, ENSDARG00000116462 189.43 1420.16 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
75. mthfd1l ENSDARG00000042221, ENSDARG00000110473 184.24 1381.25 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
76. FP067396.1 FP067396.1 181.65 1361.84
77. capns1b ENSDARG00000013804 179.05 1342.34 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
78. fbp1b ENSDARG00000020364, ENSDARG00000111266 176.46 1322.93 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
79. fgb ENSDARG00000008969 176.46 1322.93 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
80. ldhba ENSDARG00000019644 176.46 1322.93 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
81. prdx5 ENSDARG00000055064 176.46 1322.93 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
82. rpl27 ENSDARG00000015128 176.46 1322.93 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
83. cotl1 ENSDARG00000026829 173.86 1303.43 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
84. eif5a ENSDARG00000017235 173.86 1303.43 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
85. mat1a ENSDARG00000039605, ENSDARG00000115975 173.86 1303.43 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
86. rps27a ENSDARG00000032725, ENSDARG00000114059 173.86 1303.43 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
87. rpl19 ENSDARG00000013307 168.67 1264.52 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
88. fgg ENSDARG00000037281, ENSDARG00000114705 163.48 1225.61 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
89. col1a1b ENSDARG00000035809 160.89 1206.20 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
90. rpl21 ENSDARG00000010516, ENSDARG00000110263 160.89 1206.20 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
91. rps26l ENSDARG00000030408 160.89 1206.20 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
92. psap ENSDARG00000013968 158.29 1186.71 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
93. rpl26 ENSDARG00000102317 155.70 1167.29 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
94. zgc:136410 ENSDARG00000102241 155.70 1167.29 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
95. RPL29 ENSDARG00000077717 153.10 1147.80 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
96. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 153.10 1147.80 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
97. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 153.10 1147.80 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
98. rplp2 ENSDARG00000101406 153.10 1147.80 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
99. zgc:165571 zgc:165571 153.10 1147.80
100. ckmt1 ENSDARG00000016598, ENSDARG00000113143 150.51 1128.38 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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