Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s18.

Sample reads: 133,397. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 9636.47 72239.11
2. krt4 ENSDARG00000017624, ENSDARG00000115790 9544.07 71546.44 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 5067.12 37985.30 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 4977.70 37314.97
5. apoa2 ENSDARG00000015866 3481.41 26098.14 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. apobb apobb 3386.03 25383.13
7. apoeb ENSDARG00000040295 2956.81 22165.52 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 2888.26 21651.64 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. actb2 ENSDARG00000037870 2107.33 15797.45 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. zgc:161979_1 zgc:161979_1 1886.76 14143.96
11. zgc:161979 zgc:161979 1842.05 13808.80
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1505.23 11283.85 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1329.37 9965.53 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. ctsla ENSDARG00000007836 1150.53 8624.87 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
15. apoa4 apoa4 1055.15 7909.86
16. rbp4 ENSDARG00000101199 766.03 5742.49 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
17. mt-nd2 ENSDARG00000063899 715.36 5362.65 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
18. eef1a1l1 ENSDARG00000020850 673.63 5049.82 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. apoc2 ENSDARG00000092155 599.11 4491.19 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
20. mt-co2 ENSDARG00000063908 587.19 4401.83 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. cfl1l ENSDARG00000012972 575.27 4312.47 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
22. bhmt ENSDARG00000013430 551.42 4133.68 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
23. zgc:153129 zgc:153129 479.89 3597.46
24. zgc:92533 zgc:92533 476.91 3575.12
25. mt-nd4 ENSDARG00000063917 456.04 3418.67 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
26. APOA4 APOA4 444.12 3329.31
27. mt-cyb ENSDARG00000063924 441.14 3306.97 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
28. tfa ENSDARG00000016771 429.21 3217.54 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
29. APOB APOB 423.25 3172.86
30. mt-co3 ENSDARG00000063912 423.25 3172.86 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
31. zgc:113413 zgc:113413 423.25 3172.86
32. cyt1l ENSDARG00000036832 417.29 3128.18 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
33. pfn1 ENSDARG00000088091 414.31 3105.85 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
34. slc43a2b ENSDARG00000061120, ENSDARG00000117188 399.41 2994.15 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
35. pla2g12b ENSDARG00000015662 396.43 2971.81 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
36. sepp1a 384.51 2882.45 selenoprotein P, plasma, 1a
37. pvalb9 ENSDARG00000071601, ENSDARG00000113946 381.52 2860.04 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
38. col1a1a ENSDARG00000012405, ENSDARG00000116113 363.64 2726.00 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
39. fetub ENSDARG00000053973 360.66 2703.66 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
40. aldob ENSDARG00000053684 357.68 2681.32 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
41. icn ENSDARG00000009978 348.74 2614.30 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
42. mt-atp6 ENSDARG00000063911 342.78 2569.63 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
43. ahcy ENSDARG00000005191 330.85 2480.19 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
44. hmga1a ENSDARG00000028335 327.87 2457.85 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
45. pabpc1a ENSDARG00000017219 307.01 2301.48 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
46. si:dkey-151g10.6 si:dkey-151g10.6 307.01 2301.48
47. eef2b ENSDARG00000100371, ENSDARG00000109247 301.05 2256.80 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
48. ppiaa ENSDARG00000009212 277.20 2078.01 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
49. fabp2 ENSDARG00000006427, ENSDARG00000110230 268.26 2010.99 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
50. gamt ENSDARG00000070844, ENSDARG00000109945 262.30 1966.31 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
51. hspa8 ENSDARG00000068992, ENSDARG00000114726 253.36 1899.30 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
52. apoea ENSDARG00000102004 235.47 1765.18 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
53. npc2 ENSDARG00000090912 232.49 1742.84 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
54. paics ENSDARG00000033539 229.51 1720.51 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
55. myl12.1 ENSDARG00000099766 223.55 1675.83 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
56. rpl10a ENSDARG00000042905, ENSDARG00000115649 220.57 1653.49 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
57. ckmt1 ENSDARG00000016598, ENSDARG00000113143 202.68 1519.38 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
58. fgb ENSDARG00000008969 199.70 1497.04 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
59. zgc:112425 zgc:112425 199.70 1497.04
60. FP067396.1 FP067396.1 196.72 1474.70
61. icn2 ENSDARG00000055514 193.74 1452.36 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
62. krt8 ENSDARG00000058358, ENSDARG00000109279 193.74 1452.36 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
63. zgc:136410 ENSDARG00000102241 193.74 1452.36 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
64. cotl1 ENSDARG00000026829 190.76 1430.02 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
65. btf3 ENSDARG00000035400, ENSDARG00000116462 187.78 1407.68 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
66. dbi ENSDARG00000026369 187.78 1407.68 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
67. col1a1b ENSDARG00000035809 184.80 1385.34 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
68. ctsba ENSDARG00000055120 181.82 1363.00 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
69. prps1a ENSDARG00000015524 181.82 1363.00 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
70. ptmab ENSDARG00000101766 181.82 1363.00 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
71. rpl23 ENSDARG00000053457 178.84 1340.66 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
72. mt-nd1 ENSDARG00000063895 175.86 1318.32 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
73. mat1a ENSDARG00000039605, ENSDARG00000115975 172.88 1295.98 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
74. s100a10b ENSDARG00000025254 169.90 1273.64 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
75. psap ENSDARG00000013968 166.92 1251.30 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
76. rplp1 ENSDARG00000021864 166.92 1251.30 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
77. capns1b ENSDARG00000013804 163.94 1228.96 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
78. fbp1b ENSDARG00000020364, ENSDARG00000111266 163.94 1228.96 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
79. nt5c3a ENSDARG00000058597 163.94 1228.96 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
80. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 163.94 1228.96 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
81. acp5a ENSDARG00000019763, ENSDARG00000111996 157.97 1184.21 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
82. zgc:165571 zgc:165571 157.97 1184.21
83. rps26l ENSDARG00000030408 154.99 1161.87 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
84. dao.1 ENSDARG00000035602 152.01 1139.53 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
85. rpl8 ENSDARG00000014867 152.01 1139.53 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
86. rps27a ENSDARG00000032725, ENSDARG00000114059 149.03 1117.19 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
87. rps5 ENSDARG00000043453 149.03 1117.19 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
88. a2ml ENSDARG00000056314 146.05 1094.85 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
89. mt-co1 ENSDARG00000063905 146.05 1094.85 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
90. myh9a ENSDARG00000063295 143.07 1072.51 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
91. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 140.09 1050.17 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
92. rps12 ENSDARG00000036875, ENSDARG00000115157 140.09 1050.17 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
93. rps14 ENSDARG00000036629 140.09 1050.17 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
94. atp6v0ca ENSDARG00000057853 137.11 1027.84 ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
95. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 137.11 1027.84 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
96. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 137.11 1027.84 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
97. fgg ENSDARG00000037281, ENSDARG00000114705 137.11 1027.84 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
98. fkbp1aa ENSDARG00000022684 137.11 1027.84 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
99. ldhba ENSDARG00000019644 137.11 1027.84 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
100. rpl11 ENSDARG00000043509 137.11 1027.84 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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