Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s17.

Sample reads: 133,395. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 14134.11 105956.96
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7951.72 59610.41 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa1b ENSDARG00000101324 5534.46 41489.32 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. apoc1l apoc1l 5335.10 39994.81
5. apoa2 ENSDARG00000015866 4665.50 34975.12 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. apobb apobb 3288.39 24651.56
7. apoeb ENSDARG00000040295 3037.02 22767.15 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 1941.61 14555.36 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa1a ENSDARG00000012076, ENSDARG00000110395 1884.19 14124.91 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
10. zgc:161979 zgc:161979 1714.08 12849.67
11. zgc:161979_1 zgc:161979_1 1537.47 11525.71
12. actb2 ENSDARG00000037870 1497.38 11225.17 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1126.83 8447.33 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. ctsla ENSDARG00000007836 1075.90 8065.53 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
15. apoa4 apoa4 958.89 7188.36
16. rbp4 ENSDARG00000101199 819.12 6140.57 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
17. mt-co2 ENSDARG00000063908 818.03 6132.40 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
18. eef1a1l1 ENSDARG00000020850 720.52 5401.41 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. bhmt ENSDARG00000013430 678.26 5084.61 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
20. apoc2 ENSDARG00000092155 588.33 4410.44 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
21. mt-atp6 ENSDARG00000063911 581.83 4361.71 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
22. zgc:153129 zgc:153129 564.50 4231.80
23. mt-co3 ENSDARG00000063912 548.25 4109.98 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
24. APOB APOB 500.57 3752.54
25. mt-nd4 ENSDARG00000063917 499.49 3744.45 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
26. mt-cyb ENSDARG00000063924 486.49 3646.99 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
27. mt-nd2 ENSDARG00000063899 479.99 3598.27 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
28. slc43a2b ENSDARG00000061120, ENSDARG00000117188 474.57 3557.63 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
29. zgc:92533 zgc:92533 440.98 3305.83
30. APOA4 APOA4 438.81 3289.56
31. pla2g12b ENSDARG00000015662 421.48 3159.64 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
32. zgc:113413 zgc:113413 413.89 3102.74
33. cyt1l ENSDARG00000036832 404.14 3029.65 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
34. cfl1l ENSDARG00000012972 396.56 2972.83 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
35. pfn1 ENSDARG00000088091 383.56 2875.37 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
36. si:dkey-151g10.6 si:dkey-151g10.6 364.05 2729.12
37. col1a1a ENSDARG00000012405, ENSDARG00000116113 361.89 2712.92 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
38. pvalb9 ENSDARG00000071601, ENSDARG00000113946 347.80 2607.30 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
39. icn ENSDARG00000009978 327.21 2452.94 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
40. aldob ENSDARG00000053684 322.88 2420.48 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
41. gamt ENSDARG00000070844, ENSDARG00000109945 322.88 2420.48 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
42. ahcy ENSDARG00000005191 314.21 2355.49 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
43. fetub ENSDARG00000053973 309.88 2323.03 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
44. sepp1a 305.54 2290.49 selenoprotein P, plasma, 1a
45. tfa ENSDARG00000016771 295.79 2217.40 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
46. apoea ENSDARG00000102004 293.63 2201.21 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
47. fabp2 ENSDARG00000006427, ENSDARG00000110230 293.63 2201.21 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
48. ppiaa ENSDARG00000009212 288.21 2160.58 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
49. hmga1a ENSDARG00000028335 260.04 1949.40 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
50. rpl10a ENSDARG00000042905, ENSDARG00000115649 252.45 1892.50 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
51. dbi ENSDARG00000026369 250.29 1876.31 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
52. npc2 ENSDARG00000090912 235.12 1762.59 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
53. paics ENSDARG00000033539 235.12 1762.59 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
54. mt-nd1 ENSDARG00000063895 231.87 1738.22 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
55. hspa8 ENSDARG00000068992, ENSDARG00000114726 218.86 1640.69 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
56. ldhba ENSDARG00000019644 218.86 1640.69 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
57. mt-co1 ENSDARG00000063905 212.36 1591.97 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
58. gapdh ENSDARG00000043457 211.28 1583.87 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
59. psap ENSDARG00000013968 209.11 1567.60 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
60. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 203.70 1527.05 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
61. nt5c3a ENSDARG00000058597 201.53 1510.78 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
62. ckmt1 ENSDARG00000016598, ENSDARG00000113143 200.45 1502.68 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
63. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 191.78 1437.69 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
64. rpl23 ENSDARG00000053457 190.69 1429.52 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
65. mthfd1l ENSDARG00000042221, ENSDARG00000110473 188.53 1413.32 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
66. eef2b ENSDARG00000100371, ENSDARG00000109247 187.44 1405.15 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
67. myl12.1 ENSDARG00000099766 187.44 1405.15 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
68. zgc:136410 ENSDARG00000102241 187.44 1405.15 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
69. fgb ENSDARG00000008969 184.19 1380.79 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
70. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 182.03 1364.60 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
71. mat1a ENSDARG00000039605, ENSDARG00000115975 182.03 1364.60 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
72. krt8 ENSDARG00000058358, ENSDARG00000109279 177.69 1332.06 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
73. gatm ENSDARG00000036239 172.27 1291.43 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
74. rpl21 ENSDARG00000010516, ENSDARG00000110263 172.27 1291.43 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
75. zgc:112425 zgc:112425 170.11 1275.24
76. pabpc1a ENSDARG00000017219 169.02 1267.07 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
77. prps1a ENSDARG00000015524 169.02 1267.07 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
78. fgg ENSDARG00000037281, ENSDARG00000114705 167.94 1258.97 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
79. cotl1 ENSDARG00000026829 164.69 1234.61 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
80. myh9a ENSDARG00000063295 161.44 1210.24 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
81. FP067396.1 FP067396.1 160.36 1202.15
82. icn2 ENSDARG00000055514 157.11 1177.78 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
83. rpl27 ENSDARG00000015128 156.02 1169.61 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
84. rpl8 ENSDARG00000014867 154.94 1161.51 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
85. acp5a ENSDARG00000019763, ENSDARG00000111996 153.86 1153.42 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
86. col1a1b ENSDARG00000035809 153.86 1153.42 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
87. ptmab ENSDARG00000101766 152.77 1145.25 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
88. rpl11 ENSDARG00000043509 150.60 1128.98 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
89. capns1b ENSDARG00000013804 149.52 1120.88 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
90. fbp1b ENSDARG00000020364, ENSDARG00000111266 148.44 1112.79 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
91. btf3 ENSDARG00000035400, ENSDARG00000116462 146.27 1096.52 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
92. prdx5 ENSDARG00000055064 146.27 1096.52 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
93. atp1b3a ENSDARG00000015790 141.94 1064.06 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
94. eif5a ENSDARG00000017235 139.77 1047.79 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
95. rpl26 ENSDARG00000102317 138.69 1039.70 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
96. rps27a ENSDARG00000032725, ENSDARG00000114059 138.69 1039.70 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
97. si:dkey-150i13.2 ENSDARG00000071052 135.44 1015.33 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
98. a2ml ENSDARG00000056314 133.27 999.06 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
99. ass1 132.19 990.97 argininosuccinate synthase 1
100. rplp2 ENSDARG00000101406 132.19 990.97 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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