Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s16.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 22613.74 169507.59
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7750.34 58094.83 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 5304.27 39759.63
4. apoa1b ENSDARG00000101324 4680.35 35082.87 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. apoa2 ENSDARG00000015866 4262.50 31950.76 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. apobb apobb 3058.54 22926.14
7. apoeb ENSDARG00000040295 2526.21 18935.91 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. tmsb4x ENSDARG00000077777 2064.47 15474.81 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa1a ENSDARG00000012076, ENSDARG00000110395 1549.30 11613.21 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
10. zgc:161979 zgc:161979 1455.81 10912.43
11. zgc:161979_1 zgc:161979_1 1184.87 8881.52
12. actb2 ENSDARG00000037870 1167.70 8752.82 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
13. actb1 ENSDARG00000037746, ENSDARG00000113649 1020.79 7651.62 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
14. apoa4 apoa4 927.29 6950.76
15. ctsla ENSDARG00000007836 877.68 6578.90 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
16. mt-co2 ENSDARG00000063908 870.05 6521.70 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
17. bhmt ENSDARG00000013430 700.24 5248.84 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
18. rbp4 ENSDARG00000101199 696.42 5220.21 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
19. mt-atp6 ENSDARG00000063911 633.46 4748.28 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
20. eef1a1l1 ENSDARG00000020850 616.29 4619.57 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. mt-co3 ENSDARG00000063912 585.76 4390.73 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
22. mt-nd2 ENSDARG00000063899 559.05 4190.52 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
23. mt-nd4 ENSDARG00000063917 557.14 4176.20 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
24. mt-cyb ENSDARG00000063924 536.15 4018.86 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. cfl1l ENSDARG00000012972 457.92 3432.47 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
26. zgc:92533 zgc:92533 440.75 3303.76
27. zgc:153129 zgc:153129 436.93 3275.13
28. apoc2 ENSDARG00000092155 423.58 3175.06 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
29. APOB APOB 421.67 3160.75
30. zgc:113413 zgc:113413 412.13 3089.24
31. APOA4 APOA4 391.14 2931.90
32. pla2g12b ENSDARG00000015662 391.14 2931.90 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
33. slc43a2b ENSDARG00000061120, ENSDARG00000117188 385.42 2889.02 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
34. cyt1l ENSDARG00000036832 379.69 2846.07 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
35. si:dkey-151g10.6 si:dkey-151g10.6 373.97 2803.20
36. pfn1 ENSDARG00000088091 354.89 2660.18 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
37. pvalb9 ENSDARG00000071601, ENSDARG00000113946 328.18 2459.96 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
38. ppiaa ENSDARG00000009212 299.56 2245.44 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
39. ahcy ENSDARG00000005191 295.74 2216.80 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
40. mt-nd1 ENSDARG00000063895 288.11 2159.61 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
41. icn ENSDARG00000009978 284.29 2130.97 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
42. tfa ENSDARG00000016771 278.57 2088.10 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
43. fabp2 ENSDARG00000006427, ENSDARG00000110230 276.66 2073.78 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
44. aldob ENSDARG00000053684 259.49 1945.08 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
45. mt-co1 ENSDARG00000063905 259.49 1945.08 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
46. apoea ENSDARG00000102004 244.23 1830.69 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
47. gamt ENSDARG00000070844, ENSDARG00000109945 236.59 1773.43 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
48. rpl10a ENSDARG00000042905, ENSDARG00000115649 232.78 1744.87 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
49. sepp1a 228.96 1716.23 selenoprotein P, plasma, 1a
50. col1a1a ENSDARG00000012405, ENSDARG00000116113 217.51 1630.41 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
51. hspa8 ENSDARG00000068992, ENSDARG00000114726 204.16 1530.34 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
52. myl12.1 ENSDARG00000099766 204.16 1530.34 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
53. fetub ENSDARG00000053973 200.34 1501.70 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
54. ldhba ENSDARG00000019644 200.34 1501.70 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
55. rplp1 ENSDARG00000021864 200.34 1501.70 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
56. paics ENSDARG00000033539 198.43 1487.39 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
57. npc2 ENSDARG00000090912 196.53 1473.15 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
58. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 192.71 1444.51 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
59. gapdh ENSDARG00000043457 192.71 1444.51 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
60. fgb ENSDARG00000008969 190.80 1430.19 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
61. krt8 ENSDARG00000058358, ENSDARG00000109279 190.80 1430.19 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
62. zgc:112425 zgc:112425 190.80 1430.19
63. dbi ENSDARG00000026369 183.17 1373.00 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
64. dao.1 ENSDARG00000035602 177.44 1330.05 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
65. myh9a ENSDARG00000063295 177.44 1330.05 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
66. pabpc1a ENSDARG00000017219 177.44 1330.05 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
67. hmga1a ENSDARG00000028335 175.54 1315.81 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
68. rpl23 ENSDARG00000053457 175.54 1315.81 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
69. rpl18a ENSDARG00000025073 169.81 1272.86 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
70. eef2b ENSDARG00000100371, ENSDARG00000109247 167.90 1258.54 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
71. gatm ENSDARG00000036239 167.90 1258.54 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
72. btf3 ENSDARG00000035400, ENSDARG00000116462 162.18 1215.67 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
73. prps1a ENSDARG00000015524 158.36 1187.03 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
74. rpl36a ENSDARG00000058105, ENSDARG00000112656 156.46 1172.79 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
75. ptmab ENSDARG00000101766 154.55 1158.47 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
76. rpl19 ENSDARG00000013307 154.55 1158.47 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
77. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 152.64 1144.16 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
78. FP067396.1 FP067396.1 150.73 1129.84
79. acp5a ENSDARG00000019763, ENSDARG00000111996 150.73 1129.84 acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
80. mthfd1l ENSDARG00000042221, ENSDARG00000110473 150.73 1129.84 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
81. icn2 ENSDARG00000055514 148.82 1115.52 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
82. nt5c3a ENSDARG00000058597 148.82 1115.52 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
83. rps23 ENSDARG00000021838 148.82 1115.52 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
84. rps27a ENSDARG00000032725, ENSDARG00000114059 145.01 1086.96 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
85. si:dkey-150i13.2 ENSDARG00000071052 145.01 1086.96 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
86. ctsba ENSDARG00000055120 143.10 1072.65 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
87. fbp1b ENSDARG00000020364, ENSDARG00000111266 143.10 1072.65 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
88. rpl26 ENSDARG00000102317 143.10 1072.65 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
89. rps14 ENSDARG00000036629 141.19 1058.33 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
90. tpma ENSDARG00000033683 141.19 1058.33 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
91. rpl21 ENSDARG00000010516, ENSDARG00000110263 135.47 1015.45 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
92. rps9 ENSDARG00000011405, ENSDARG00000113248 135.47 1015.45 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
93. cotl1 ENSDARG00000026829 133.56 1001.14 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
94. rplp2 ENSDARG00000101406 133.56 1001.14 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
95. zgc:153867 133.56 1001.14 zgc:153867, transcript variant X2
96. id1 ENSDARG00000040764 131.65 986.82 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
97. mat1a ENSDARG00000039605, ENSDARG00000115975 131.65 986.82 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
98. rpl8 ENSDARG00000014867 131.65 986.82 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
99. rps26l ENSDARG00000030408 131.65 986.82 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
100. zgc:136410 ENSDARG00000102241 131.65 986.82 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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