Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk2, section s14.

Sample reads: 133,411. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 11883.15 89071.69
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7282.24 54584.98 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 4070.71 30512.54
4. apoa1b ENSDARG00000101324 3935.17 29496.58 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. apoa2 ENSDARG00000015866 3018.80 22627.81 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
6. apobb apobb 2576.85 19315.11
7. apoeb ENSDARG00000040295 1738.14 13028.45 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. actb2 ENSDARG00000037870 1714.13 12848.48 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
9. tmsb4x ENSDARG00000077777 1602.59 12012.42 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 1201.59 9006.67 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. actb1 ENSDARG00000037746, ENSDARG00000113649 1019.44 7641.34 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
12. zgc:161979_1 zgc:161979_1 926.25 6942.83
13. zgc:161979 zgc:161979 894.48 6704.69
14. mt-co2 ENSDARG00000063908 890.95 6678.23 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
15. eef1a1l1 ENSDARG00000020850 765.99 5741.58 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
16. mt-atp6 ENSDARG00000063911 765.29 5736.33 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
17. ctsla ENSDARG00000007836 737.05 5524.65 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
18. mt-nd2 ENSDARG00000063899 734.93 5508.76 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
19. mt-nd4 ENSDARG00000063917 733.52 5498.19 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
20. mt-co3 ENSDARG00000063912 676.33 5069.52 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
21. apoa4 apoa4 632.56 4741.44
22. mt-cyb ENSDARG00000063924 594.44 4455.70 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
23. bhmt ENSDARG00000013430 543.61 4074.70 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
24. rbp4 ENSDARG00000101199 424.30 3180.40 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
25. si:dkey-151g10.6 si:dkey-151g10.6 420.77 3153.94
26. ppiaa ENSDARG00000009212 418.65 3138.05 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
27. slc43a2b ENSDARG00000061120, ENSDARG00000117188 417.94 3132.72 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
28. zgc:153129 zgc:153129 406.65 3048.10
29. zgc:113413 zgc:113413 398.88 2989.86
30. zgc:92533 zgc:92533 397.47 2979.29
31. hmga1a ENSDARG00000028335 391.82 2936.94 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
32. mt-nd1 ENSDARG00000063895 386.17 2894.59 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
33. tpma ENSDARG00000033683 377.00 2825.85 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
34. APOB APOB 374.17 2804.64
35. zgc:112425 zgc:112425 357.93 2682.91
36. cyt1l ENSDARG00000036832 341.70 2561.26 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
37. eef2b ENSDARG00000100371, ENSDARG00000109247 334.64 2508.34 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
38. ahcy ENSDARG00000005191 326.17 2444.85 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
39. mt-co1 ENSDARG00000063905 323.34 2423.64 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
40. pabpc1a ENSDARG00000017219 307.10 2301.91 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
41. apoc2 ENSDARG00000092155 299.34 2243.74 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
42. hspa8 ENSDARG00000068992, ENSDARG00000114726 297.22 2227.85 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
43. cfl1l ENSDARG00000012972 295.81 2217.28 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
44. pla2g12b ENSDARG00000015662 291.57 2185.50 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
45. pfn1 ENSDARG00000088091 288.75 2164.36 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
46. rpl10a ENSDARG00000042905, ENSDARG00000115649 277.45 2079.66 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
47. sepp1a 275.33 2063.77 selenoprotein P, plasma, 1a
48. col1a1a ENSDARG00000012405, ENSDARG00000116113 271.10 2032.07 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
49. pvalb9 ENSDARG00000071601, ENSDARG00000113946 259.10 1942.12 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
50. fabp2 ENSDARG00000006427, ENSDARG00000110230 254.15 1905.01 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
51. APOA4 APOA4 249.92 1873.31
52. ckmb ENSDARG00000040565 240.74 1804.50 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
53. rpl8 ENSDARG00000014867 240.74 1804.50 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
54. aldob ENSDARG00000053684 237.21 1778.04 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
55. tfa ENSDARG00000016771 235.09 1762.15 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
56. rpl21 ENSDARG00000010516, ENSDARG00000110263 234.39 1756.90 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
57. rpl23 ENSDARG00000053457 232.27 1741.01 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
58. col1a1b ENSDARG00000035809 223.80 1677.52 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
59. ckma ENSDARG00000035327, ENSDARG00000114671 220.97 1656.31 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
60. krt8 ENSDARG00000058358, ENSDARG00000109279 219.56 1645.74 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
61. ptmab ENSDARG00000101766 216.03 1619.28 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
62. dbi ENSDARG00000026369 215.33 1614.03 diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein) [Source:ZFIN;Acc:ZDB-GENE-040426-1861]
63. pvalb2 ENSDARG00000002768, ENSDARG00000114085 213.91 1603.39 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
64. eif5a ENSDARG00000017235 210.38 1576.93 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
65. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 208.97 1566.36 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
66. gamt ENSDARG00000070844, ENSDARG00000109945 206.85 1550.47 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
67. btf3 ENSDARG00000035400, ENSDARG00000116462 203.32 1524.01 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
68. hsp90ab1 ENSDARG00000029150 197.68 1481.74 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
69. rpl26 ENSDARG00000102317 196.26 1471.09 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
70. rpl9 ENSDARG00000037350, ENSDARG00000112384 194.15 1455.28 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
71. fetub ENSDARG00000053973 193.44 1449.95 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
72. myh9a ENSDARG00000063295 192.73 1444.63 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
73. icn ENSDARG00000009978 189.20 1418.17 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
74. actc1b ENSDARG00000099197 186.38 1397.04 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
75. gatm ENSDARG00000036239 184.97 1386.47 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
76. npc2 ENSDARG00000090912 184.26 1381.14 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
77. myl12.1 ENSDARG00000099766 181.44 1360.01 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
78. rplp1 ENSDARG00000021864 178.61 1338.79 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
79. rpl18a ENSDARG00000025073 177.20 1328.23 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
80. rpl11 ENSDARG00000043509 174.38 1307.09 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
81. cotl1 ENSDARG00000026829 168.73 1264.74 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
82. rps2 ENSDARG00000077291 168.73 1264.74 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
83. rps23 ENSDARG00000021838 168.02 1259.42 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
84. rps27a ENSDARG00000032725, ENSDARG00000114059 167.32 1254.17 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
85. rpl19 ENSDARG00000013307 166.61 1248.85 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
86. rpl36a ENSDARG00000058105, ENSDARG00000112656 164.49 1232.96 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
87. atp2a1 ENSDARG00000020574 162.38 1217.14 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
88. ldhba ENSDARG00000019644 160.96 1206.50 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
89. prps1a ENSDARG00000015524 160.96 1206.50 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
90. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 160.26 1201.25 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
91. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 159.55 1195.93 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
92. AL954137.2 ENSDARG00000114408 158.14 1185.36
93. ckmt1 ENSDARG00000016598, ENSDARG00000113143 157.43 1180.04 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
94. mthfd1l ENSDARG00000042221, ENSDARG00000110473 157.43 1180.04 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
95. apoea ENSDARG00000102004 156.73 1174.79 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
96. rpl27 ENSDARG00000015128 156.02 1169.47 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
97. nt5c3a ENSDARG00000058597 153.20 1148.33 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
98. si:dkey-150i13.2 ENSDARG00000071052 151.79 1137.76 si:dkey-150i13.2 [Source:ZFIN;Acc:ZDB-GENE-090312-157]
99. ATP5B 148.26 1111.30 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
100. rps9 ENSDARG00000011405, ENSDARG00000113248 146.14 1095.41 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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