Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk1, section s7.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 21703.59 162700.04 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. AC024175.4 AC024175.4 19438.45 145719.52
3. tmsb4x ENSDARG00000077777 3020.19 22640.73 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
4. zgc:92533 zgc:92533 2168.75 16257.94
5. actb2 ENSDARG00000037870 1638.61 12283.77 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
6. cyt1l ENSDARG00000036832 1301.25 9754.77 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
7. actb1 ENSDARG00000037746, ENSDARG00000113649 1220.93 9152.65 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
8. icn ENSDARG00000009978 1140.60 8550.46 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
9. cfl1l ENSDARG00000012972 1124.54 8430.07 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
10. tpma ENSDARG00000033683 722.92 5419.34 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. col1a1b ENSDARG00000035809 642.59 4817.15 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
12. mt-nd2 ENSDARG00000063899 642.59 4817.15 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
13. mt-nd4 ENSDARG00000063917 626.53 4696.76 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
14. tpm3 ENSDARG00000005162 626.53 4696.76 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
15. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 610.46 4576.29 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
16. col1a1a ENSDARG00000012405, ENSDARG00000116113 594.40 4455.89 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
17. si:dkey-151g10.6 si:dkey-151g10.6 562.27 4215.03
18. mt-atp6 ENSDARG00000063911 530.14 3974.17 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
19. si:dkeyp-113d7.4 si:dkeyp-113d7.4 530.14 3974.17
20. pvalb2 ENSDARG00000002768, ENSDARG00000114085 514.07 3853.70 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
21. zgc:113413 zgc:113413 514.07 3853.70
22. eef1a1l1 ENSDARG00000020850 498.01 3733.31 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. mt-co2 ENSDARG00000063908 498.01 3733.31 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
24. zgc:153129 zgc:153129 498.01 3733.31
25. mt-co3 ENSDARG00000063912 481.95 3612.92 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
26. hmga1a ENSDARG00000028335 449.82 3372.06 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
27. zgc:165571 zgc:165571 433.75 3251.59
28. hspa8 ENSDARG00000068992, ENSDARG00000114726 401.62 3010.73 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
29. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 385.56 2890.33 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
30. rpl8 ENSDARG00000014867 385.56 2890.33 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
31. ckmb ENSDARG00000040565 369.49 2769.87 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
32. icn2 ENSDARG00000055514 369.49 2769.87 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
33. zgc:66286 zgc:66286 369.49 2769.87
34. capns1b ENSDARG00000013804 337.36 2529.00 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
35. krt8 ENSDARG00000058358, ENSDARG00000109279 337.36 2529.00 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
36. mt-cyb ENSDARG00000063924 337.36 2529.00 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. myl12.1 ENSDARG00000099766 337.36 2529.00 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
38. rpl10a ENSDARG00000042905, ENSDARG00000115649 321.30 2408.61 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
39. CU914813.1 CU914813.1 305.23 2288.14
40. gch2 ENSDARG00000099101 305.23 2288.14 GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
41. myl10 ENSDARG00000062592 289.17 2167.75 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
42. rpl19 ENSDARG00000013307 289.17 2167.75 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
43. rps27a ENSDARG00000032725, ENSDARG00000114059 289.17 2167.75 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
44. btf3 ENSDARG00000035400, ENSDARG00000116462 273.10 2047.28 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
45. pfn1 ENSDARG00000088091 273.10 2047.28 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
46. rpl27 ENSDARG00000015128 273.10 2047.28 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
47. tnnc2 ENSDARG00000070835, ENSDARG00000111155 273.10 2047.28 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
48. ywhabl ENSDARG00000040287 273.10 2047.28 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
49. rpl21 ENSDARG00000010516, ENSDARG00000110263 257.04 1926.89 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
50. rpl26 ENSDARG00000102317 257.04 1926.89 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
51. rpl9 ENSDARG00000037350, ENSDARG00000112384 257.04 1926.89 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
52. rplp2 ENSDARG00000101406 257.04 1926.89 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
53. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 240.97 1806.42 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
54. mt-nd1 ENSDARG00000063895 240.97 1806.42 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
55. mylz3 ENSDARG00000017441 240.97 1806.42 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
56. ppiaa ENSDARG00000009212 240.97 1806.42 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
57. ptmab ENSDARG00000101766 240.97 1806.42 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
58. rpl23 ENSDARG00000053457 240.97 1806.42 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
59. pvalb1 ENSDARG00000037789 224.91 1686.03 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
60. rps14 ENSDARG00000036629 224.91 1686.03 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
61. s100a10b ENSDARG00000025254 224.91 1686.03 S100 calcium binding protein A10b [Source:ZFIN;Acc:ZDB-GENE-040426-1937]
62. eef2b ENSDARG00000100371, ENSDARG00000109247 208.84 1565.56 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
63. postnb ENSDARG00000104267 208.84 1565.56 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
64. rpl11 ENSDARG00000043509 208.84 1565.56 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
65. rpl36a ENSDARG00000058105, ENSDARG00000112656 208.84 1565.56 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
66. rplp1 ENSDARG00000021864 208.84 1565.56 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
67. rps5 ENSDARG00000043453 208.84 1565.56 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
68. zgc:153867 208.84 1565.56 zgc:153867, transcript variant X2
69. FP067396.1 FP067396.1 192.78 1445.17
70. ahnak ENSDARG00000061764 192.78 1445.17 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
71. aldoaa ENSDARG00000011665 192.78 1445.17 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
72. anxa1c ENSDARG00000104359 192.78 1445.17 annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
73. col1a2 ENSDARG00000020007 192.78 1445.17 collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
74. krt5 ENSDARG00000058371, ENSDARG00000112017 192.78 1445.17 keratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
75. rps2 ENSDARG00000077291 192.78 1445.17 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
76. tnnt3b ENSDARG00000068457 192.78 1445.17 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
77. acta1b ENSDARG00000055618 176.71 1324.70 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
78. aldoab ENSDARG00000034470 176.71 1324.70 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
79. anxa1a ENSDARG00000026726 176.71 1324.70 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
80. atp2a1 ENSDARG00000020574 176.71 1324.70 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
81. col11a1a ENSDARG00000026165, ENSDARG00000115341 176.71 1324.70 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
82. fkbp1aa ENSDARG00000022684 176.71 1324.70 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
83. pvalb4 ENSDARG00000024433 176.71 1324.70 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
84. rpl18a ENSDARG00000025073 176.71 1324.70 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
85. rpl5b ENSDARG00000015862, ENSDARG00000109661 176.71 1324.70 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
86. rps26l ENSDARG00000030408 176.71 1324.70 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
87. si:ch211-157c3.4 ENSDARG00000087093 176.71 1324.70 si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]
88. smyhc1 ENSDARG00000099959, ENSDARG00000115916 176.71 1324.70 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
89. CABZ01080098.1 ENSDARG00000110680 160.65 1204.31
90. eef1g ENSDARG00000056119 160.65 1204.31 eukaryotic translation elongation factor 1 gamma [Source:ZFIN;Acc:ZDB-GENE-020423-3]
91. krt17 ENSDARG00000094041 160.65 1204.31 keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
92. nme2b.2 ENSDARG00000099420 160.65 1204.31 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
93. rpl36 ENSDARG00000100588 160.65 1204.31 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
94. si:ch1073-429i10.3 160.65 1204.31 si:ch1073-429i10.3, transcript variant X2
95. zgc:112425 zgc:112425 160.65 1204.31
96. cav1 ENSDARG00000103747 144.58 1083.84 caveolin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2415]
97. ckma ENSDARG00000035327, ENSDARG00000114671 144.58 1083.84 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
98. fabp3 ENSDARG00000023290 144.58 1083.84 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
99. id1 ENSDARG00000040764 144.58 1083.84 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
100. lgals1l1 ENSDARG00000088711 144.58 1083.84 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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