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Experiment Zebrafish_40hpf_trunk1, section s29.

Sample reads: 133,408. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 13806.07 103487.29
2. krt4 ENSDARG00000017624, ENSDARG00000115790 8229.38 61685.64 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoa2 ENSDARG00000015866 4798.96 35971.96 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
4. apoc1l apoc1l 4702.50 35248.92
5. tmsb4x ENSDARG00000077777 3217.40 24116.93 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. apoa1b ENSDARG00000101324 3024.47 22670.77 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
7. apobb apobb 2731.07 20471.51
8. apoeb ENSDARG00000040295 2650.68 19868.92 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
9. actb2 ENSDARG00000037870 2035.74 15259.46 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. zgc:161979_1 zgc:161979_1 1416.78 10619.87
11. actb1 ENSDARG00000037746, ENSDARG00000113649 1340.41 10047.42 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1143.47 8571.20 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. zgc:161979 zgc:161979 1008.83 7561.97
14. apoa4 apoa4 884.23 6628.00
15. bhmt ENSDARG00000013430 819.92 6145.94 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
16. col1a1a ENSDARG00000012405, ENSDARG00000116113 775.71 5814.55 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
17. apoc2 ENSDARG00000092155 697.34 5227.11 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
18. eef1a1l1 ENSDARG00000020850 645.09 4835.45 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
19. ctsla ENSDARG00000007836 624.99 4684.79 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
20. mt-co2 ENSDARG00000063908 604.89 4534.12 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
21. APOA4 APOA4 596.86 4473.93
22. zgc:92533 zgc:92533 590.83 4428.73
23. cfl1l ENSDARG00000012972 588.82 4413.67 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
24. zgc:153129 zgc:153129 512.45 3841.21
25. rbp4 ENSDARG00000101199 476.28 3570.09 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
26. cyt1l ENSDARG00000036832 415.99 3118.17 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
27. ahcy ENSDARG00000005191 405.94 3042.84 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
28. APOB APOB 397.90 2982.57
29. sepp1a 397.90 2982.57 selenoprotein P, plasma, 1a
30. mt-atp6 ENSDARG00000063911 387.86 2907.31 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
31. mt-nd4 ENSDARG00000063917 385.85 2892.25 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
32. pfn1 ENSDARG00000088091 381.83 2862.11 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
33. pla2g12b ENSDARG00000015662 361.73 2711.45 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
34. apoea ENSDARG00000102004 355.70 2666.25 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
35. paics ENSDARG00000033539 349.67 2621.05 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
36. mt-cyb ENSDARG00000063924 343.64 2575.85 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. icn ENSDARG00000009978 335.61 2515.66 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
38. ppiaa ENSDARG00000009212 327.57 2455.39 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
39. mt-nd2 ENSDARG00000063899 323.55 2425.26 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
40. hmga1a ENSDARG00000028335 311.49 2334.86 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
41. si:dkey-151g10.6 si:dkey-151g10.6 309.48 2319.79
42. mt-co3 ENSDARG00000063912 303.45 2274.60 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
43. tfa ENSDARG00000016771 293.40 2199.26 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
44. eef2b ENSDARG00000100371, ENSDARG00000109247 285.37 2139.07 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
45. pvalb9 ENSDARG00000071601, ENSDARG00000113946 283.36 2124.00 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
46. krt8 ENSDARG00000058358, ENSDARG00000109279 271.30 2033.61 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
47. slc43a2b ENSDARG00000061120, ENSDARG00000117188 269.29 2018.54 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
48. and1 ENSDARG00000088514 251.20 1882.94 actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
49. fetub ENSDARG00000053973 245.17 1837.74 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
50. pabpc1a ENSDARG00000017219 241.15 1807.61 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
51. hspa8 ENSDARG00000068992, ENSDARG00000114726 223.07 1672.08 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
52. myl12.1 ENSDARG00000099766 215.03 1611.82 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
53. fn1b ENSDARG00000006526 213.02 1596.75 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
54. aldob ENSDARG00000053684 211.01 1581.68 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
55. rpl23 ENSDARG00000053457 211.01 1581.68 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
56. gatm ENSDARG00000036239 204.98 1536.49 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
57. gamt ENSDARG00000070844, ENSDARG00000109945 202.97 1521.42 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
58. rpl10a ENSDARG00000042905, ENSDARG00000115649 198.95 1491.29 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
59. dao.1 ENSDARG00000035602 192.92 1446.09 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
60. mt-co1 ENSDARG00000063905 192.92 1446.09 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
61. rplp1 ENSDARG00000021864 192.92 1446.09 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
62. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 186.89 1400.89 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
63. id1 ENSDARG00000040764 184.88 1385.82 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
64. zgc:153867 184.88 1385.82 zgc:153867, transcript variant X2
65. prps1a ENSDARG00000015524 182.88 1370.83 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
66. myh9a ENSDARG00000063295 180.87 1355.76 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
67. ptmab ENSDARG00000101766 180.87 1355.76 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
68. rpl21 ENSDARG00000010516, ENSDARG00000110263 180.87 1355.76 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
69. rps23 ENSDARG00000021838 178.86 1340.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
70. zgc:112425 zgc:112425 176.85 1325.63
71. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 174.84 1310.56 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
72. and3 ENSDARG00000056873 172.83 1295.50 actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
73. ldhba ENSDARG00000019644 172.83 1295.50 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
74. rpl36a ENSDARG00000058105, ENSDARG00000112656 172.83 1295.50 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
75. hdlbp hdlbp 168.81 1265.36
76. icn2 ENSDARG00000055514 168.81 1265.36 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
77. zgc:113413 zgc:113413 168.81 1265.36
78. mt-nd1 ENSDARG00000063895 164.79 1235.23 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
79. gapdh ENSDARG00000043457 162.78 1220.16 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
80. prdx5 ENSDARG00000055064 162.78 1220.16 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
81. hsp90ab1 ENSDARG00000029150 160.77 1205.10 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
82. rplp2 ENSDARG00000101406 158.76 1190.03 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
83. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 156.75 1174.96 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
84. rps26l ENSDARG00000030408 156.75 1174.96 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
85. rps14 ENSDARG00000036629 154.74 1159.90 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
86. rps27a ENSDARG00000032725, ENSDARG00000114059 148.71 1114.70 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
87. FP067396.1 FP067396.1 144.69 1084.56
88. col1a1b ENSDARG00000035809 144.69 1084.56 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
89. rpl11 ENSDARG00000043509 142.68 1069.50 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
90. rpl18a ENSDARG00000025073 142.68 1069.50 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
91. rpl36 ENSDARG00000100588 142.68 1069.50 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
92. rpl18 ENSDARG00000029533 140.67 1054.43 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
93. col18a1 col18a1 138.66 1039.37
94. ctsd ENSDARG00000057698, ENSDARG00000110172, ENSDARG00000113876 138.66 1039.37 cathepsin D [Source:ZFIN;Acc:ZDB-GENE-010131-8]
95. rpl9 ENSDARG00000037350, ENSDARG00000112384 138.66 1039.37 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
96. cst3 ENSDARG00000007795 136.65 1024.30 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
97. rpl27 ENSDARG00000015128 132.63 994.17 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
98. rps2 ENSDARG00000077291 132.63 994.17 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
99. btf3 ENSDARG00000035400, ENSDARG00000116462 130.63 979.17 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
100. nccrp1 ENSDARG00000035326, ENSDARG00000113175 128.62 964.11 non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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