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Experiment Zebrafish_40hpf_trunk1, section s28.

Sample reads: 133,391. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 14977.52 112283.09
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7793.84 58428.66 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 5670.97 42513.98
4. apoa2 ENSDARG00000015866 4865.10 36472.56 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. apoeb ENSDARG00000040295 3382.32 25356.49 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
6. apobb apobb 3322.45 24907.66
7. apoa1b ENSDARG00000101324 3257.98 24424.34 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. tmsb4x ENSDARG00000077777 2583.36 19366.87 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. actb2 ENSDARG00000037870 1890.32 14171.30 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 1524.23 11426.81 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. zgc:161979_1 zgc:161979_1 1468.97 11012.54
12. actb1 ENSDARG00000037746, ENSDARG00000113649 1250.24 9372.77 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
13. zgc:161979 zgc:161979 1208.79 9062.03
14. apoa4 apoa4 893.36 6697.32
15. bhmt ENSDARG00000013430 803.56 6024.11 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
16. apoc2 ENSDARG00000092155 734.49 5506.31 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
17. eef1a1l1 ENSDARG00000020850 642.39 4815.85 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
18. APOA4 APOA4 637.78 4781.29
19. ctsla ENSDARG00000007836 575.62 4315.29 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
20. rbp4 ENSDARG00000101199 538.78 4039.11 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
21. zgc:153129 zgc:153129 534.17 4004.55
22. mt-co2 ENSDARG00000063908 518.05 3883.70 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
23. sepp1a 499.63 3745.61 selenoprotein P, plasma, 1a
24. pla2g12b ENSDARG00000015662 472.00 3538.48 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
25. APOB APOB 442.07 3314.10
26. col1a1a ENSDARG00000012405, ENSDARG00000116113 430.56 3227.81 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
27. zgc:92533 zgc:92533 425.96 3193.33
28. tfa ENSDARG00000016771 416.75 3124.28 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
29. paics ENSDARG00000033539 407.54 3055.24 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
30. ahcy ENSDARG00000005191 405.23 3037.92 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
31. cfl1l ENSDARG00000012972 400.63 3003.43 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
32. mt-atp6 ENSDARG00000063911 400.63 3003.43 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
33. pfn1 ENSDARG00000088091 396.02 2968.87 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
34. mt-nd4 ENSDARG00000063917 379.91 2848.10 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
35. si:dkey-151g10.6 si:dkey-151g10.6 361.49 2710.01
36. mt-nd2 ENSDARG00000063899 343.07 2571.92 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
37. mt-co3 ENSDARG00000063912 338.46 2537.36 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
38. mt-cyb ENSDARG00000063924 322.34 2416.51 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
39. slc43a2b ENSDARG00000061120, ENSDARG00000117188 320.04 2399.27 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
40. fetub ENSDARG00000053973 313.13 2347.47 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
41. cyt1l ENSDARG00000036832 308.53 2312.98 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
42. pvalb9 ENSDARG00000071601, ENSDARG00000113946 306.23 2295.74 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
43. apoea ENSDARG00000102004 297.02 2226.69 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
44. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 290.11 2174.89 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
45. icn ENSDARG00000009978 283.20 2123.09 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
46. eef2b ENSDARG00000100371, ENSDARG00000109247 271.69 2036.80 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
47. myl12.1 ENSDARG00000099766 264.78 1985.00 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
48. gamt ENSDARG00000070844, ENSDARG00000109945 253.27 1898.71 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
49. aldob ENSDARG00000053684 246.36 1846.91 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
50. gapdh ENSDARG00000043457 241.76 1812.42 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
51. rpl23 ENSDARG00000053457 234.85 1760.62 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
52. hspa8 ENSDARG00000068992, ENSDARG00000114726 227.94 1708.81 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
53. gatm ENSDARG00000036239 225.64 1691.57 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
54. rpl10a ENSDARG00000042905, ENSDARG00000115649 223.34 1674.33 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
55. dao.1 ENSDARG00000035602 216.43 1622.53 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
56. rpl18a ENSDARG00000025073 216.43 1622.53 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
57. krt8 ENSDARG00000058358, ENSDARG00000109279 214.13 1605.28 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
58. pabpc1a ENSDARG00000017219 209.52 1570.72 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
59. ppiaa ENSDARG00000009212 200.31 1501.68 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
60. ldhba ENSDARG00000019644 198.01 1484.44 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
61. zgc:112425 zgc:112425 191.10 1432.63
62. col1a1b ENSDARG00000035809 188.80 1415.39 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
63. hmga1a ENSDARG00000028335 188.80 1415.39 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
64. id1 ENSDARG00000040764 184.20 1380.91 inhibitor of DNA binding 1 [Source:ZFIN;Acc:ZDB-GENE-990415-96]
65. hdlbp hdlbp 170.38 1277.30
66. rpl19 ENSDARG00000013307 170.38 1277.30 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
67. rps23 ENSDARG00000021838 170.38 1277.30 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
68. rpl8 ENSDARG00000014867 168.08 1260.06 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
69. prdx5 ENSDARG00000055064 165.78 1242.82 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
70. mt-co1 ENSDARG00000063905 163.47 1225.50 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
71. btf3 ENSDARG00000035400, ENSDARG00000116462 161.17 1208.26 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
72. mt-nd1 ENSDARG00000063895 161.17 1208.26 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
73. zgc:153867 161.17 1208.26 zgc:153867, transcript variant X2
74. ctsba ENSDARG00000055120 158.87 1191.01 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
75. fn1b ENSDARG00000006526 158.87 1191.01 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
76. fgg ENSDARG00000037281, ENSDARG00000114705 154.26 1156.45 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
77. prps1a ENSDARG00000015524 154.26 1156.45 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
78. rps9 ENSDARG00000011405, ENSDARG00000113248 154.26 1156.45 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
79. cst3 ENSDARG00000007795 151.96 1139.21 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
80. rpl21 ENSDARG00000010516, ENSDARG00000110263 151.96 1139.21 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
81. rps27a ENSDARG00000032725, ENSDARG00000114059 151.96 1139.21 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
82. cotl1 ENSDARG00000026829 149.66 1121.97 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
83. fgb ENSDARG00000008969 149.66 1121.97 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
84. myh9a ENSDARG00000063295 149.66 1121.97 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
85. hsp90ab1 ENSDARG00000029150 145.06 1087.48 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
86. rplp1 ENSDARG00000021864 145.06 1087.48 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
87. rps2 ENSDARG00000077291 145.06 1087.48 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
88. zgc:113413 zgc:113413 145.06 1087.48
89. ces2 ENSDARG00000041569, ENSDARG00000110630 142.75 1070.16 carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
90. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 138.15 1035.68 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
91. icn2 ENSDARG00000055514 138.15 1035.68 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
92. cd63 ENSDARG00000025147, ENSDARG00000115979 128.94 966.63 CD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
93. fabp2 ENSDARG00000006427, ENSDARG00000110230 128.94 966.63 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
94. mat1a ENSDARG00000039605, ENSDARG00000115975 128.94 966.63 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
95. ptmab ENSDARG00000101766 128.94 966.63 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
96. rpl26 ENSDARG00000102317 128.94 966.63 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
97. rpl5b ENSDARG00000015862, ENSDARG00000109661 128.94 966.63 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
98. apom ENSDARG00000076838 126.64 949.39 apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
99. psap ENSDARG00000013968 126.64 949.39 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
100. serpina1 ENSDARG00000090286 126.64 949.39 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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