Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk1, section s27.

Sample reads: 133,409. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. krt4 ENSDARG00000017624, ENSDARG00000115790 10998.71 82443.64 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
2. apoa2 ENSDARG00000015866 6079.80 45572.69 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
3. apoa1b ENSDARG00000101324 4455.46 33397.04 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
4. AC024175.4 AC024175.4 4450.88 33362.71
5. apobb apobb 4262.75 31952.53
6. apoc1l apoc1l 4148.03 31092.62
7. apoeb ENSDARG00000040295 2711.82 20327.14 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
8. zgc:161979_1 zgc:161979_1 2569.58 19260.94
9. tmsb4x ENSDARG00000077777 2330.97 17472.38 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
10. apoa1a ENSDARG00000012076, ENSDARG00000110395 2257.56 16922.12 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
11. actb2 ENSDARG00000037870 1830.82 13723.38 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
12. zgc:161979 zgc:161979 1266.43 9492.85
13. apoa4 apoa4 1261.85 9458.52
14. bhmt ENSDARG00000013430 1092.07 8185.89 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
15. mt-nd4 ENSDARG00000063917 835.11 6259.78 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
16. ctsla ENSDARG00000007836 720.40 5399.94 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
17. cyt1l ENSDARG00000036832 715.81 5365.54 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
18. mt-co2 ENSDARG00000063908 711.22 5331.13 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
19. apoc2 ENSDARG00000092155 669.93 5021.63 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
20. zgc:92533 zgc:92533 619.45 4643.25
21. APOB APOB 614.86 4608.84
22. sepp1a 601.10 4505.70 selenoprotein P, plasma, 1a
23. actb1 ENSDARG00000037746, ENSDARG00000113649 587.33 4402.48 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
24. eef1a1l1 ENSDARG00000020850 573.57 4299.34 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
25. icn ENSDARG00000009978 559.80 4196.12 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
26. mt-nd2 ENSDARG00000063899 495.56 3714.60 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
27. eef2b ENSDARG00000100371, ENSDARG00000109247 490.97 3680.19 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
28. ppiaa ENSDARG00000009212 458.85 3439.43 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
29. paics ENSDARG00000033539 426.73 3198.66 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
30. pla2g12b ENSDARG00000015662 422.14 3164.26 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
31. si:dkey-151g10.6 si:dkey-151g10.6 412.97 3095.52
32. mt-atp6 ENSDARG00000063911 408.38 3061.12 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
33. rbp4 ENSDARG00000101199 399.20 2992.31 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
34. cfl1l ENSDARG00000012972 371.67 2785.95 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
35. pvalb9 ENSDARG00000071601, ENSDARG00000113946 367.08 2751.54 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
36. slc43a2b ENSDARG00000061120, ENSDARG00000117188 367.08 2751.54 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
37. rps26l ENSDARG00000030408 362.49 2717.14 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
38. gamt ENSDARG00000070844, ENSDARG00000109945 357.91 2682.81 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
39. mt-co3 ENSDARG00000063912 344.14 2579.59 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
40. zgc:153129 zgc:153129 344.14 2579.59
41. APOA4 APOA4 334.96 2510.78
42. a2ml ENSDARG00000056314 325.79 2442.04 alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
43. tfa ENSDARG00000016771 316.61 2373.23 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
44. rpl36 ENSDARG00000100588 298.25 2235.61 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
45. ahcy ENSDARG00000005191 284.49 2132.47 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
46. hspa8 ENSDARG00000068992, ENSDARG00000114726 279.90 2098.06 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
47. actc1b ENSDARG00000099197 270.72 2029.25 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
48. fgg ENSDARG00000037281, ENSDARG00000114705 266.13 1994.85 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
49. pabpc1a ENSDARG00000017219 256.96 1926.11 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
50. col1a1b ENSDARG00000035809 252.37 1891.70 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
51. rpl19 ENSDARG00000013307 252.37 1891.70 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
52. icn2 ENSDARG00000055514 247.78 1857.30 ictacalcin 2 [Source:ZFIN;Acc:ZDB-GENE-070822-9]
53. rpl10a ENSDARG00000042905, ENSDARG00000115649 247.78 1857.30 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
54. col1a1a ENSDARG00000012405, ENSDARG00000116113 243.19 1822.89 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
55. rpl39 ENSDARG00000036316, ENSDARG00000117167 243.19 1822.89 ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
56. aldob ENSDARG00000053684 238.60 1788.49 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
57. gatm ENSDARG00000036239 234.02 1754.16 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
58. rpl18a ENSDARG00000025073 234.02 1754.16 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
59. zgc:113413 zgc:113413 234.02 1754.16
60. apoea ENSDARG00000102004 224.84 1685.35 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
61. dao.1 ENSDARG00000035602 224.84 1685.35 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
62. rps9 ENSDARG00000011405, ENSDARG00000113248 224.84 1685.35 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
63. ywhabl ENSDARG00000040287 220.25 1650.94 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
64. krt8 ENSDARG00000058358, ENSDARG00000109279 215.66 1616.53 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
65. mt-cyb ENSDARG00000063924 215.66 1616.53 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
66. pfn1 ENSDARG00000088091 215.66 1616.53 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
67. ldhba ENSDARG00000019644 211.07 1582.13 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
68. prps1a ENSDARG00000015524 211.07 1582.13 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
69. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 206.48 1547.72 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
70. rpl26 ENSDARG00000102317 201.90 1513.39 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
71. rps14 ENSDARG00000036629 201.90 1513.39 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
72. rps23 ENSDARG00000021838 201.90 1513.39 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
73. tpma ENSDARG00000033683 197.31 1478.99 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
74. ppiab ENSDARG00000103994 188.13 1410.18 peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
75. zgc:112425 zgc:112425 188.13 1410.18
76. nccrp1 ENSDARG00000035326, ENSDARG00000113175 178.95 1341.37 non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
77. rps15 ENSDARG00000070849, ENSDARG00000110979 178.95 1341.37 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
78. rps27a ENSDARG00000032725, ENSDARG00000114059 178.95 1341.37 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
79. atp2a1 ENSDARG00000020574 174.36 1306.96 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
80. mpc2 ENSDARG00000024478 174.36 1306.96 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
81. rpl23 ENSDARG00000053457 174.36 1306.96 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
82. RPL29 ENSDARG00000077717 169.78 1272.63 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
83. prdx5 ENSDARG00000055064 169.78 1272.63 peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
84. rpl21 ENSDARG00000010516, ENSDARG00000110263 165.19 1238.22 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
85. rpl36a ENSDARG00000058105, ENSDARG00000112656 160.60 1203.82 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
86. anxa1a ENSDARG00000026726 156.01 1169.41 annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
87. si:ch211-105c13.3 ENSDARG00000089441 156.01 1169.41 si:ch211-105c13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4483]
88. fn1b ENSDARG00000006526 151.42 1135.01 fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
89. gapdh ENSDARG00000043457 151.42 1135.01 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
90. hmga1a ENSDARG00000028335 151.42 1135.01 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
91. rpl9 ENSDARG00000037350, ENSDARG00000112384 151.42 1135.01 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
92. rps18 ENSDARG00000100392 151.42 1135.01 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
93. CU914813.1 CU914813.1 146.83 1100.60
94. calm3a_1 ENSDARG00000015050, ENSDARG00000100825 146.83 1100.60 calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
95. fbp1b ENSDARG00000020364, ENSDARG00000111266 146.83 1100.60 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
96. mt-nd1 ENSDARG00000063895 146.83 1100.60 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
97. pfn2 ENSDARG00000003952 146.83 1100.60 profilin 2 [Source:ZFIN;Acc:ZDB-GENE-040115-4]
98. rps2 ENSDARG00000077291 146.83 1100.60 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
99. rps27.1 ENSDARG00000023298 146.83 1100.60 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
100. ckmb ENSDARG00000040565 142.24 1066.20 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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