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Experiment Zebrafish_40hpf_trunk1, section s26.

Sample reads: 133,396. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 13148.56 98567.58
2. krt4 ENSDARG00000017624, ENSDARG00000115790 9463.22 70940.60 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. apoc1l apoc1l 4185.08 31373.26
4. apoa2 ENSDARG00000015866 3806.28 28533.61 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
5. tmsb4x ENSDARG00000077777 3137.67 23521.40 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. apobb apobb 2914.04 21844.97
7. apoa1b ENSDARG00000101324 2489.60 18663.17 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
8. apoeb ENSDARG00000040295 2359.53 17688.11 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
9. actb2 ENSDARG00000037870 2179.26 16336.72 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
10. zgc:161979_1 zgc:161979_1 1423.93 10674.43
11. actb1 ENSDARG00000037746, ENSDARG00000113649 1307.55 9801.99 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
12. apoa1a ENSDARG00000012076, ENSDARG00000110395 1081.64 8108.47 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
13. eef1a1l1 ENSDARG00000020850 864.86 6483.38 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
14. zgc:161979 zgc:161979 773.58 5799.11
15. apoa4 apoa4 654.92 4909.58
16. rbp4 ENSDARG00000101199 609.28 4567.44 retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
17. ctsla ENSDARG00000007836 593.31 4447.72 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
18. zgc:92533 zgc:92533 575.05 4310.84
19. bhmt ENSDARG00000013430 540.82 4054.23 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
20. apoc2 ENSDARG00000092155 538.54 4037.14 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
21. zgc:153129 zgc:153129 511.16 3831.89
22. mt-nd2 ENSDARG00000063899 479.21 3592.38 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
23. cyt1l ENSDARG00000036832 476.93 3575.28 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
24. cfl1l ENSDARG00000012972 465.52 3489.75 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
25. col1a1a ENSDARG00000012405, ENSDARG00000116113 444.98 3335.77 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
26. mt-nd4 ENSDARG00000063917 444.98 3335.77 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
27. si:dkey-151g10.6 si:dkey-151g10.6 438.13 3284.42
28. APOA4 APOA4 433.57 3250.24
29. mt-co2 ENSDARG00000063908 433.57 3250.24 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
30. sepp1a 410.75 3079.17 selenoprotein P, plasma, 1a
31. APOB APOB 403.90 3027.82
32. icn ENSDARG00000009978 394.78 2959.45 ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
33. mt-co3 ENSDARG00000063912 392.49 2942.28 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
34. pfn1 ENSDARG00000088091 369.67 2771.21 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
35. paics ENSDARG00000033539 367.39 2754.12 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]
36. mt-cyb ENSDARG00000063924 362.83 2719.94 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
37. pla2g12b ENSDARG00000015662 351.42 2634.40 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
38. mt-atp6 ENSDARG00000063911 337.73 2531.78 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
39. ahcy ENSDARG00000005191 321.75 2411.98 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
40. eef2b ENSDARG00000100371, ENSDARG00000109247 314.91 2360.71 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
41. ppiaa ENSDARG00000009212 314.91 2360.71 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
42. slc43a2b ENSDARG00000061120, ENSDARG00000117188 305.78 2292.27 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
43. zgc:113413 zgc:113413 303.50 2275.17
44. hmga1a ENSDARG00000028335 255.58 1915.94 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
45. tfa ENSDARG00000016771 255.58 1915.94 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
46. dao.1 ENSDARG00000035602 253.30 1898.85 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
47. col1a1b ENSDARG00000035809 241.89 1813.32 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
48. hspa8 ENSDARG00000068992, ENSDARG00000114726 239.60 1796.15 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
49. aldob ENSDARG00000053684 228.19 1710.62 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
50. myl12.1 ENSDARG00000099766 225.91 1693.52 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
51. krt8 ENSDARG00000058358, ENSDARG00000109279 223.63 1676.43 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
52. rpl23 ENSDARG00000053457 219.07 1642.25 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
53. rpl10a ENSDARG00000042905, ENSDARG00000115649 212.22 1590.90 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
54. mt-nd1 ENSDARG00000063895 209.94 1573.81 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
55. mt-co1 ENSDARG00000063905 207.66 1556.71 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
56. pvalb9 ENSDARG00000071601, ENSDARG00000113946 207.66 1556.71 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
57. rps27a ENSDARG00000032725, ENSDARG00000114059 203.09 1522.45 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
58. pabpc1a ENSDARG00000017219 193.97 1454.09 poly(A) binding protein, cytoplasmic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3238]
59. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 191.68 1436.92 aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
60. fetub ENSDARG00000053973 189.40 1419.83 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
61. ldhba ENSDARG00000019644 184.84 1385.64 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
62. actc1b ENSDARG00000099197 180.27 1351.39 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
63. atp6v1g1 ENSDARG00000022315, ENSDARG00000110951 177.99 1334.29 ATPase H+ transporting V1 subunit G1 [Source:ZFIN;Acc:ZDB-GENE-030131-6965]
64. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 177.99 1334.29 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
65. zgc:112425 zgc:112425 175.71 1317.20
66. rps23 ENSDARG00000021838 171.15 1283.02 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
67. rpl36 ENSDARG00000100588 168.86 1265.85 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
68. rpl8 ENSDARG00000014867 168.86 1265.85 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
69. apoea ENSDARG00000102004 166.58 1248.76 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
70. gamt ENSDARG00000070844, ENSDARG00000109945 166.58 1248.76 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
71. gatm ENSDARG00000036239 164.30 1231.67 glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
72. hsp90ab1 ENSDARG00000029150 164.30 1231.67 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
73. mthfd1l ENSDARG00000042221, ENSDARG00000110473 164.30 1231.67 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
74. ptmab ENSDARG00000101766 164.30 1231.67 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
75. zgc:153867 164.30 1231.67 zgc:153867, transcript variant X2
76. hdlbp hdlbp 159.74 1197.48
77. prps1a ENSDARG00000015524 159.74 1197.48 phosphoribosyl pyrophosphate synthetase 1A [Source:ZFIN;Acc:ZDB-GENE-011212-5]
78. capns1b ENSDARG00000013804 157.45 1180.32 calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
79. rpl18a ENSDARG00000025073 157.45 1180.32 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
80. ctsba ENSDARG00000055120 155.17 1163.22 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
81. fgg ENSDARG00000037281, ENSDARG00000114705 155.17 1163.22 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
82. rpl21 ENSDARG00000010516, ENSDARG00000110263 155.17 1163.22 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
83. rpl36a ENSDARG00000058105, ENSDARG00000112656 155.17 1163.22 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
84. gapdh ENSDARG00000043457 152.89 1146.13 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
85. rpl26 ENSDARG00000102317 150.61 1129.04 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
86. cotl1 ENSDARG00000026829 148.33 1111.95 coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
87. myh9a ENSDARG00000063295 148.33 1111.95 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
88. tpma ENSDARG00000033683 148.33 1111.95 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
89. rpl9 ENSDARG00000037350, ENSDARG00000112384 146.04 1094.78 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
90. rps26l ENSDARG00000030408 146.04 1094.78 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
91. rpl11 ENSDARG00000043509 143.76 1077.69 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
92. dap ENSDARG00000000069, ENSDARG00000114419 139.20 1043.51 death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
93. fkbp1aa ENSDARG00000022684 139.20 1043.51 FK506 binding protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-030131-7275]
94. rpl27 ENSDARG00000015128 136.92 1026.41 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
95. rplp1 ENSDARG00000021864 136.92 1026.41 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
96. rps9 ENSDARG00000011405, ENSDARG00000113248 136.92 1026.41 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
97. rpl19 ENSDARG00000013307 134.63 1009.25 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
98. rps14 ENSDARG00000036629 134.63 1009.25 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
99. col18a1 col18a1 130.07 975.06
100. fabp2 ENSDARG00000006427, ENSDARG00000110230 130.07 975.06 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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