Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_trunk1, section s23.

Sample reads: 133,391. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16710.07 125271.22
2. krt4 ENSDARG00000017624, ENSDARG00000115790 4853.67 36386.75 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. tpma ENSDARG00000033683 2098.20 15729.68 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. apoc1l apoc1l 1868.57 14008.20
5. ckma ENSDARG00000035327, ENSDARG00000114671 1857.02 13921.62 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. actb2 ENSDARG00000037870 1546.49 11593.65 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
7. ckmb ENSDARG00000040565 1488.70 11160.41 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. tmsb4x ENSDARG00000077777 1456.33 10917.74 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
9. apoa2 ENSDARG00000015866 1413.18 10594.26 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
10. mt-co2 ENSDARG00000063908 1296.06 9716.24 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
11. pvalb2 ENSDARG00000002768, ENSDARG00000114085 1291.44 9681.60 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
12. mt-atp6 ENSDARG00000063911 1146.57 8595.55 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. mt-nd2 ENSDARG00000063899 1128.85 8462.71 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. mt-nd4 ENSDARG00000063917 1108.82 8312.55 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
15. atp2a1 ENSDARG00000020574 1096.49 8220.11 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. mt-co3 ENSDARG00000063912 1064.90 7983.29 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. apobb apobb 1057.19 7925.49
18. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1034.07 7752.16 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
19. apoa1b ENSDARG00000101324 1029.45 7717.53 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
20. actc1b ENSDARG00000099197 1028.68 7711.76 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
21. mylz3 ENSDARG00000017441 959.33 7191.86 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
22. eef1a1l1 ENSDARG00000020850 911.56 6833.74 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
23. apoeb ENSDARG00000040295 802.91 6019.22 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
24. mt-cyb ENSDARG00000063924 801.37 6007.67 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
25. tnnc2 ENSDARG00000070835, ENSDARG00000111155 751.28 5632.16 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
26. actb1 ENSDARG00000037746, ENSDARG00000113649 726.63 5447.36 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
27. acta1b ENSDARG00000055618 711.98 5337.54 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
28. mt-nd1 ENSDARG00000063895 597.94 4482.61 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
29. si:dkey-151g10.6 si:dkey-151g10.6 537.84 4032.05
30. apoa1a ENSDARG00000012076, ENSDARG00000110395 530.14 3974.33 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
31. zgc:161979_1 zgc:161979_1 476.97 3575.73
32. tnni2a.4 ENSDARG00000029069 441.52 3309.97 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
33. ppiaa ENSDARG00000009212 417.64 3130.94 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
34. myhz1.3 ENSDARG00000067997 403.77 3026.96 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
35. rpl23 ENSDARG00000053457 403.00 3021.19 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
36. zgc:66286 zgc:66286 397.60 2980.71
37. tnnt3a ENSDARG00000030270 393.75 2951.85 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
38. pvalb1 ENSDARG00000037789 383.73 2876.73 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
39. tnnt3b ENSDARG00000068457 359.85 2697.71 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 355.22 2663.00 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. zgc:92533 zgc:92533 336.73 2524.38
42. myl1 ENSDARG00000014196 335.19 2512.84 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
43. zgc:161979 zgc:161979 329.79 2472.35
44. eef2b ENSDARG00000100371, ENSDARG00000109247 325.17 2437.72 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
45. myl10 ENSDARG00000062592 315.15 2362.60 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
46. mt-co1 ENSDARG00000063905 307.45 2304.88 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
47. ATP5B 306.68 2299.10 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
48. btf3 ENSDARG00000035400, ENSDARG00000116462 303.60 2276.01 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
49. tpm3 ENSDARG00000005162 297.43 2229.76 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
50. cyt1l ENSDARG00000036832 295.89 2218.21 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
51. atp1b1a ENSDARG00000013144 294.35 2206.67 ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
52. acta1a ENSDARG00000036371 282.79 2120.01 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
53. hspa8 ENSDARG00000068992, ENSDARG00000114726 281.25 2108.46 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
54. rpl21 ENSDARG00000010516, ENSDARG00000110263 281.25 2108.46 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
55. mylpfb ENSDARG00000002589 279.71 2096.92 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
56. rpl8 ENSDARG00000014867 279.71 2096.92 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
57. col1a1a ENSDARG00000012405, ENSDARG00000116113 274.31 2056.43 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
58. rps27a ENSDARG00000032725, ENSDARG00000114059 272.77 2044.89 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
59. si:ch211-226o13.2 269.69 2021.80 si:ch211-226o13.2
60. rpl26 ENSDARG00000102317 266.61 1998.71 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
61. cfl1l ENSDARG00000012972 263.53 1975.62 cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
62. hmga1a ENSDARG00000028335 261.22 1958.30 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
63. rplp1 ENSDARG00000021864 256.59 1923.59 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
64. aldoaa ENSDARG00000011665 250.43 1877.41 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
65. bhmt ENSDARG00000013430 250.43 1877.41 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
66. rpl36a ENSDARG00000058105, ENSDARG00000112656 241.95 1813.84 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
67. aldoab ENSDARG00000034470 241.18 1808.07 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
68. rps23 ENSDARG00000021838 241.18 1808.07 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
69. atp5g3b 238.87 1790.75 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
70. col1a1b ENSDARG00000035809 238.10 1784.98 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
71. atp5g1 237.33 1779.20 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
72. zgc:153129 zgc:153129 231.16 1732.95
73. zgc:112425 zgc:112425 228.85 1715.63
74. gapdh ENSDARG00000043457 228.08 1709.86 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
75. pfn1 ENSDARG00000088091 228.08 1709.86 profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
76. apoa4 apoa4 225.77 1692.54
77. rps2 ENSDARG00000077291 219.61 1646.36 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
78. COX5B_1 ENSDARG00000015978 210.36 1577.02 cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
79. rps26l ENSDARG00000030408 208.05 1559.70 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
80. ahcy ENSDARG00000005191 206.51 1548.15 adenosylhomocysteinase [Source:ZFIN;Acc:ZDB-GENE-031219-6]
81. rpl11 ENSDARG00000043509 204.97 1536.61 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
82. rpl9 ENSDARG00000037350, ENSDARG00000112384 203.42 1524.99 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
83. apoc2 ENSDARG00000092155 200.34 1501.90 apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
84. ctsla ENSDARG00000007836 198.80 1490.35 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
85. rps12 ENSDARG00000036875, ENSDARG00000115157 197.26 1478.81 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
86. rps9 ENSDARG00000011405, ENSDARG00000113248 197.26 1478.81 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
87. rpl19 ENSDARG00000013307 195.72 1467.26 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
88. rpl5b ENSDARG00000015862, ENSDARG00000109661 195.72 1467.26 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
89. ldhba ENSDARG00000019644 193.41 1449.95 lactate dehydrogenase Ba [Source:ZFIN;Acc:ZDB-GENE-991026-6]
90. rplp2 ENSDARG00000101406 191.10 1432.63 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
91. rpl27 ENSDARG00000015128 188.78 1415.24 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
92. eif5a ENSDARG00000017235 187.24 1403.69 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
93. fabp3 ENSDARG00000023290 184.93 1386.37 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
94. rpl18a ENSDARG00000025073 181.08 1357.51 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
95. myl12.1 ENSDARG00000099766 179.54 1345.97 myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
96. pvalb4 ENSDARG00000024433 179.54 1345.97 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
97. rplp2l ENSDARG00000011201 179.54 1345.97 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
98. hsp90ab1 ENSDARG00000029150 178.77 1340.19 heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
99. rps14 ENSDARG00000036629 178.77 1340.19 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
100. rps20 ENSDARG00000036044 177.23 1328.65 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA