Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk1, section s20.

Sample reads: 133,405. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 24530.34 183878.26
2. tpma ENSDARG00000033683 4271.18 32016.56 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 3067.60 22994.58 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2533.03 18987.47 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2184.57 16375.43 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 2146.21 16087.89 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. ckma ENSDARG00000035327, ENSDARG00000114671 2037.14 15270.30 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
8. mylz3 ENSDARG00000017441 1716.27 12865.08 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. mt-co2 ENSDARG00000063908 1380.50 10348.16 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
10. mt-atp6 ENSDARG00000063911 1334.52 10003.50 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
11. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1308.53 9808.68 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
12. atp2a1 ENSDARG00000020574 1254.94 9406.97 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. mt-nd2 ENSDARG00000063899 1206.75 9045.74 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. acta1b ENSDARG00000055618 1168.07 8755.80 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
15. mt-nd4 ENSDARG00000063917 1133.19 8494.34 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
16. mt-co3 ENSDARG00000063912 1130.65 8475.30 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
17. myhz1.3 ENSDARG00000067997 994.31 7453.30 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
18. pvalb1 ENSDARG00000037789 906.49 6795.01 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
19. mt-cyb ENSDARG00000063924 850.05 6371.93 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
20. actc1b ENSDARG00000099197 826.27 6193.68 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
21. actb2 ENSDARG00000037870 822.47 6165.20 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
22. tnni2a.4 ENSDARG00000029069 822.47 6165.20 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
23. tmsb4x ENSDARG00000077777 744.15 5578.11 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
24. tnnt3a ENSDARG00000030270 727.98 5456.90 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
25. apoc1l apoc1l 714.98 5359.46
26. si:dkey-151g10.6 si:dkey-151g10.6 708.01 5307.21
27. eef1a1l1 ENSDARG00000020850 703.88 5276.25 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
28. tnnt3b ENSDARG00000068457 681.05 5105.12 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
29. mt-nd1 ENSDARG00000063895 661.40 4957.82 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
30. si:ch211-226o13.2 619.86 4646.44 si:ch211-226o13.2
31. acta1a ENSDARG00000036371 521.57 3909.66 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
32. apoa2 ENSDARG00000015866 507.30 3802.70 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
33. mylpfb ENSDARG00000002589 496.84 3724.29 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
34. myl1 ENSDARG00000014196 466.08 3493.71 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
35. ppiaa ENSDARG00000009212 426.45 3196.65 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
36. rpl23 ENSDARG00000053457 416.94 3125.36 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
37. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 412.82 3094.48 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
38. apobb apobb 408.06 3058.80
39. mt-co1 ENSDARG00000063905 405.21 3037.43 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
40. ttna ttna 370.33 2775.98
41. actb1 ENSDARG00000037746, ENSDARG00000113649 364.62 2733.17 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
42. rpl10a ENSDARG00000042905, ENSDARG00000115649 348.45 2611.96 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
43. aldoab ENSDARG00000034470 338.62 2538.28 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
44. rpl8 ENSDARG00000014867 319.60 2395.71 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. rplp1 ENSDARG00000021864 319.60 2395.71 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
46. btf3 ENSDARG00000035400, ENSDARG00000116462 317.70 2381.46 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
47. nme2b.2 ENSDARG00000099420 308.50 2312.50 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
48. ttnb ttnb 306.92 2300.66
49. gapdh ENSDARG00000043457 300.58 2253.13 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
50. rps27a ENSDARG00000032725, ENSDARG00000114059 300.26 2250.73 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
51. apoa1b ENSDARG00000101324 296.46 2222.25 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
52. rpl21 ENSDARG00000010516, ENSDARG00000110263 283.14 2122.40 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
53. hspa8 ENSDARG00000068992, ENSDARG00000114726 274.58 2058.24 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
54. rpl18a ENSDARG00000025073 265.70 1991.67 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
55. rps23 ENSDARG00000021838 264.11 1979.76 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
56. apoeb ENSDARG00000040295 259.04 1941.75 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
57. rpl19 ENSDARG00000013307 253.02 1896.63 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
58. rpl36a ENSDARG00000058105, ENSDARG00000112656 250.16 1875.19 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
59. rpl9 ENSDARG00000037350, ENSDARG00000112384 243.19 1822.94 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
60. eef2b ENSDARG00000100371, ENSDARG00000109247 241.92 1813.42 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
61. zgc:66286 zgc:66286 241.60 1811.02
62. rpl26 ENSDARG00000102317 236.21 1770.62 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
63. rps2 ENSDARG00000077291 233.68 1751.65 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
64. rps26l ENSDARG00000030408 224.48 1682.69 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
65. rps9 ENSDARG00000011405, ENSDARG00000113248 221.63 1661.33 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
66. rpl27 ENSDARG00000015128 221.31 1658.93 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
67. col1a1b ENSDARG00000035809 216.24 1620.92 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
68. col1a1a ENSDARG00000012405, ENSDARG00000116113 214.97 1611.40 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
69. zgc:112425 zgc:112425 213.38 1599.49
70. tpm3 ENSDARG00000005162 212.43 1592.37 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
71. myhz2 ENSDARG00000012944 207.68 1556.76 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
72. atp5g3b 207.04 1551.96 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
73. myl10 ENSDARG00000062592 203.24 1523.48 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
74. rpl11 ENSDARG00000043509 201.97 1513.96 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
75. rps14 ENSDARG00000036629 198.80 1490.20 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
76. rps20 ENSDARG00000036044 194.04 1454.51 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
77. rpl18 ENSDARG00000029533 191.19 1433.15 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
78. hmga1a ENSDARG00000028335 189.29 1418.91 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
79. zgc:92533 zgc:92533 183.58 1376.11
80. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 183.26 1373.71 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
81. rpl36 ENSDARG00000100588 180.09 1349.95 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
82. tmem38a ENSDARG00000024047 178.19 1335.70 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
83. ATP5B 177.87 1333.31 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
84. rplp2 ENSDARG00000101406 177.24 1328.58 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
85. mt-nd3 ENSDARG00000063914 176.92 1326.18 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
86. rps15 ENSDARG00000070849, ENSDARG00000110979 175.02 1311.94 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
87. rpl7 ENSDARG00000007320 173.12 1297.70 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
88. apoa1a ENSDARG00000012076, ENSDARG00000110395 167.41 1254.90 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
89. ldb3b ENSDARG00000099974 165.51 1240.66 LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
90. rps19 ENSDARG00000030602 162.34 1216.89 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
91. rps6 ENSDARG00000019778 162.34 1216.89 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
92. rps27.1 ENSDARG00000023298 161.39 1209.77 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
93. rps4x ENSDARG00000014690 160.75 1204.97 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
94. pkmb ENSDARG00000099860 159.80 1197.85 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
95. rps12 ENSDARG00000036875, ENSDARG00000115157 159.48 1195.45 ribosomal protein S12 [Source:ZFIN;Acc:ZDB-GENE-030131-8951]
96. pvalb4 ENSDARG00000024433 158.53 1188.33 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
97. faua ENSDARG00000099022 158.22 1186.01 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed a [Source:ZFIN;Acc:ZDB-GENE-040426-1700]
98. slc25a4 ENSDARG00000027355, ENSDARG00000112318 154.09 1155.05 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
99. rps5 ENSDARG00000043453 151.56 1136.09 ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12]
100. rpl5b ENSDARG00000015862, ENSDARG00000109661 150.61 1128.97 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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