Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Zebrafish_40hpf_trunk1, section s19.

Sample reads: 133,416. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 19778.81 148248.84
2. tpma ENSDARG00000033683 4451.17 33363.02 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 3328.35 24947.10 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2861.08 21444.76 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. ckma ENSDARG00000035327, ENSDARG00000114671 2676.75 20063.14 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
6. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2291.24 17173.62 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
7. mylz3 ENSDARG00000017441 2084.12 15621.18 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
8. krt4 ENSDARG00000017624, ENSDARG00000115790 2039.52 15286.89 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
9. atp2a1 ENSDARG00000020574 1731.81 12980.50 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. acta1b ENSDARG00000055618 1439.95 10792.91 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
11. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1354.73 10154.16 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
12. actc1b ENSDARG00000099197 1343.33 10068.71 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
13. mt-atp6 ENSDARG00000063911 1306.17 9790.18 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
14. mt-nd2 ENSDARG00000063899 1236.79 9270.16 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
15. mt-co2 ENSDARG00000063908 1230.85 9225.64 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
16. mt-nd4 ENSDARG00000063917 1127.29 8449.42 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
17. mt-co3 ENSDARG00000063912 1101.02 8252.52 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
18. myhz1.3 ENSDARG00000067997 1020.75 7650.86 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
19. pvalb1 ENSDARG00000037789 951.38 7130.91 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
20. eef1a1l1 ENSDARG00000020850 877.55 6577.53 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
21. mt-cyb ENSDARG00000063924 837.91 6280.42 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
22. actb2 ENSDARG00000037870 819.08 6139.28 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
23. tnni2a.4 ENSDARG00000029069 812.14 6087.26 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
24. si:dkey-151g10.6 si:dkey-151g10.6 811.65 6083.59
25. tnnt3a ENSDARG00000030270 790.34 5923.86 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
26. tnnt3b ENSDARG00000068457 730.88 5478.19 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
27. tmsb4x ENSDARG00000077777 662.50 4965.66 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
28. myl1 ENSDARG00000014196 622.36 4664.80 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
29. mt-nd1 ENSDARG00000063895 613.94 4601.69 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
30. si:ch211-226o13.2 584.21 4378.85 si:ch211-226o13.2
31. mylpfb ENSDARG00000002589 564.88 4233.97 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
32. acta1a ENSDARG00000036371 557.45 4178.28 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
33. mt-co1 ENSDARG00000063905 471.73 3535.78 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
34. ppiaa ENSDARG00000009212 439.52 3294.35 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
35. rpl23 ENSDARG00000053457 398.39 2986.07 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
36. actb1 ENSDARG00000037746, ENSDARG00000113649 377.58 2830.09 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
37. apoc1l apoc1l 377.08 2826.34
38. col2a1a ENSDARG00000069093, ENSDARG00000111202 368.16 2759.48 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
39. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 366.18 2744.64 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
40. rpl10a ENSDARG00000042905, ENSDARG00000115649 363.21 2722.38 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
41. col1a1a ENSDARG00000012405, ENSDARG00000116113 361.72 2711.21 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
42. zgc:66286 zgc:66286 352.80 2644.35
43. aldoab ENSDARG00000034470 348.34 2610.93 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
44. rpl8 ENSDARG00000014867 337.94 2532.97 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 332.49 2492.12 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. nme2b.2 ENSDARG00000099420 329.51 2469.79 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
47. ttna ttna 327.53 2454.95
48. rpl36a ENSDARG00000058105, ENSDARG00000112656 308.21 2310.14 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
49. gapdh ENSDARG00000043457 304.24 2280.38 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
50. rpl21 ENSDARG00000010516, ENSDARG00000110263 304.24 2280.38 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
51. eef2b ENSDARG00000100371, ENSDARG00000109247 297.31 2228.44 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
52. rps27a ENSDARG00000032725, ENSDARG00000114059 297.31 2228.44 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
53. hspa8 ENSDARG00000068992, ENSDARG00000114726 295.82 2217.27 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
54. col1a1b ENSDARG00000035809 291.86 2187.59 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
55. rplp1 ENSDARG00000021864 291.36 2183.84 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
56. myl10 ENSDARG00000062592 278.97 2090.97 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
57. rpl26 ENSDARG00000102317 278.97 2090.97 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
58. myhz2 ENSDARG00000012944 277.49 2079.88 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
59. rpl18a ENSDARG00000025073 273.03 2046.45 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
60. tpm3 ENSDARG00000005162 265.59 1990.69 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
61. ttnb ttnb 255.68 1916.41
62. rpl27 ENSDARG00000015128 251.72 1886.73 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
63. rps2 ENSDARG00000077291 249.74 1871.89 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
64. rps23 ENSDARG00000021838 249.74 1871.89 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
65. rpl9 ENSDARG00000037350, ENSDARG00000112384 237.35 1779.02 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
66. apobb apobb 236.36 1771.60
67. rpl19 ENSDARG00000013307 233.88 1753.01 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
68. rps9 ENSDARG00000011405, ENSDARG00000113248 233.39 1749.34 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
69. rpl11 ENSDARG00000043509 223.97 1678.73 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
70. aldoaa ENSDARG00000011665 222.48 1667.56 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
71. apoa2 ENSDARG00000015866 220.50 1652.72 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
72. rpl5b ENSDARG00000015862, ENSDARG00000109661 218.52 1637.88 ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
73. fabp3 ENSDARG00000023290 218.02 1634.13 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
74. rpl18 ENSDARG00000029533 211.09 1582.19 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
75. hmga1a ENSDARG00000028335 209.11 1567.35 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
76. rps14 ENSDARG00000036629 207.62 1556.18 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
77. col9a1 col9a1 206.13 1545.01
78. zgc:112425 zgc:112425 203.16 1522.75
79. rps26l ENSDARG00000030408 202.66 1519.00 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
80. rpl7 ENSDARG00000007320 198.20 1485.58 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
81. rpl36 ENSDARG00000100588 197.21 1478.16 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
82. rps20 ENSDARG00000036044 195.73 1467.06 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
83. rplp0 ENSDARG00000051783 190.28 1426.21 ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
84. zgc:92533 zgc:92533 184.83 1385.36
85. pkmb ENSDARG00000099860 184.33 1381.62 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
86. rplp2l ENSDARG00000011201 180.37 1351.93 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
87. ATP5B 178.38 1337.02 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
88. atp5g3b 176.90 1325.93 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
89. mt-nd3 ENSDARG00000063914 176.90 1325.93 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
90. eif5a ENSDARG00000017235 175.91 1318.50 eukaryotic translation initiation factor 5A [Source:ZFIN;Acc:ZDB-GENE-040426-2229]
91. col11a1a ENSDARG00000026165, ENSDARG00000115341 175.41 1314.76 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
92. rps15 ENSDARG00000070849, ENSDARG00000110979 175.41 1314.76 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
93. RPL29 ENSDARG00000077717 171.94 1288.75 ribosomal protein L29 [Source:ZFIN;Acc:ZDB-GENE-040801-167]
94. pvalb4 ENSDARG00000024433 171.94 1288.75 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
95. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 171.45 1285.08 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
96. krt18 ENSDARG00000018404, ENSDARG00000109528 169.96 1273.91 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
97. rps27.1 ENSDARG00000023298 169.46 1270.16 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
98. ak1 ENSDARG00000001950 168.97 1266.49 adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
99. rps19 ENSDARG00000030602 167.98 1259.07 ribosomal protein S19 [Source:ZFIN;Acc:ZDB-GENE-040426-1716]
100. tmem38a ENSDARG00000024047 167.48 1255.32 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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