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Experiment Zebrafish_40hpf_trunk1, section s14.

Sample reads: 133,402. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 20763.29 155645.03
2. tpma ENSDARG00000033683 4694.56 35191.19 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
3. ckmb ENSDARG00000040565 3455.93 25906.22 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2281.11 17099.58 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
5. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 2249.20 16860.37 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
6. ckma ENSDARG00000035327, ENSDARG00000114671 2078.16 15578.23 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. krt4 ENSDARG00000017624, ENSDARG00000115790 2058.28 15429.20 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
8. mylz3 ENSDARG00000017441 1943.21 14566.62 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
9. atp2a1 ENSDARG00000020574 1640.35 12296.33 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1511.67 11331.73 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
11. mt-co2 ENSDARG00000063908 1480.29 11096.50 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
12. mt-nd4 ENSDARG00000063917 1394.51 10453.48 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
13. mt-nd2 ENSDARG00000063899 1301.92 9759.41 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
14. mt-atp6 ENSDARG00000063911 1300.35 9747.64 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
15. mt-co3 ENSDARG00000063912 1199.40 8990.90 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
16. acta1b ENSDARG00000055618 1171.68 8783.11 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
17. pvalb1 ENSDARG00000037789 1038.82 7787.17 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
18. mt-cyb ENSDARG00000063924 998.54 7485.22 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
19. actc1b ENSDARG00000099197 835.87 6265.82 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
20. myhz1.3 ENSDARG00000067997 826.97 6199.10 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
21. tnnt3a ENSDARG00000030270 784.08 5877.59 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
22. tnnt3b ENSDARG00000068457 729.68 5469.80 troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
23. mt-nd1 ENSDARG00000063895 727.59 5454.13 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
24. tnni2a.4 ENSDARG00000029069 688.88 5163.96 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
25. eef1a1l1 ENSDARG00000020850 659.59 4944.39 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
26. acta1a ENSDARG00000036371 611.99 4587.58 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
27. si:ch211-226o13.2 603.10 4520.94 si:ch211-226o13.2
28. si:dkey-151g10.6 si:dkey-151g10.6 579.04 4340.58
29. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 557.07 4175.89 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
30. mylpfb ENSDARG00000002589 534.06 4003.40 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
31. actb2 ENSDARG00000037870 521.50 3909.25 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
32. col2a1a ENSDARG00000069093, ENSDARG00000111202 507.90 3807.30 collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
33. ppiaa ENSDARG00000009212 486.98 3650.48 peptidylprolyl isomerase Aa (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-8556]
34. mt-co1 ENSDARG00000063905 474.43 3556.41 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
35. tmsb4x ENSDARG00000077777 470.24 3525.00 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
36. myl1 ENSDARG00000014196 452.98 3395.61 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
37. nme2b.2 ENSDARG00000099420 382.89 2870.21 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
38. zgc:66286 zgc:66286 382.89 2870.21
39. aldoab ENSDARG00000034470 368.76 2764.29 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
40. ttna ttna 359.35 2693.75
41. col9a1 col9a1 334.77 2509.49
42. tpm3 ENSDARG00000005162 328.49 2462.41 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
43. hmga1a ENSDARG00000028335 327.97 2458.52 high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
44. rpl10a ENSDARG00000042905, ENSDARG00000115649 323.26 2423.21 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
45. btf3 ENSDARG00000035400, ENSDARG00000116462 320.12 2399.67 basic transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8731]
46. myl10 ENSDARG00000062592 314.89 2360.47 myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
47. ttnb ttnb 311.75 2336.93
48. rplp1 ENSDARG00000021864 307.57 2305.60 ribosomal protein, large, P1 [Source:ZFIN;Acc:ZDB-GENE-030131-8663]
49. actb1 ENSDARG00000037746, ENSDARG00000113649 303.90 2278.08 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
50. hspa8 ENSDARG00000068992, ENSDARG00000114726 300.77 2254.62 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
51. gapdh ENSDARG00000043457 300.24 2250.65 glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
52. rps27a ENSDARG00000032725, ENSDARG00000114059 300.24 2250.65 ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
53. rpl21 ENSDARG00000010516, ENSDARG00000110263 295.53 2215.34 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
54. zgc:112425 zgc:112425 286.64 2148.70
55. rpl26 ENSDARG00000102317 286.12 2144.80 ribosomal protein L26 [Source:ZFIN;Acc:ZDB-GENE-040426-2117]
56. rpl18a ENSDARG00000025073 283.50 2125.16 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
57. rps23 ENSDARG00000021838 280.37 2101.70 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
58. rpl8 ENSDARG00000014867 279.32 2093.83 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
59. myhz1.2 ENSDARG00000067995 277.23 2078.16 myosin, heavy polypeptide 1.2, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-73]
60. ptmab ENSDARG00000101766 271.47 2034.98 prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
61. rpl36a ENSDARG00000058105, ENSDARG00000112656 262.58 1968.34 ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
62. rpl9 ENSDARG00000037350, ENSDARG00000112384 253.69 1901.70 ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-030131-8646]
63. col1a1a ENSDARG00000012405, ENSDARG00000116113 247.41 1854.63 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
64. aldoaa ENSDARG00000011665 239.57 1795.86 aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
65. col11a1a ENSDARG00000026165, ENSDARG00000115341 233.29 1748.78 collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
66. rps26l ENSDARG00000030408 229.10 1717.37 ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
67. fabp3 ENSDARG00000023290 227.54 1705.68 fatty acid binding protein 3, muscle and heart [Source:ZFIN;Acc:ZDB-GENE-020318-2]
68. rpl19 ENSDARG00000013307 226.49 1697.81 ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040426-2290]
69. pkmb ENSDARG00000099860 224.40 1682.14 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
70. col9a2 ENSDARG00000024492 221.26 1658.60 procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
71. eef2b ENSDARG00000100371, ENSDARG00000109247 216.55 1623.29 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
72. mt-nd3 ENSDARG00000063914 214.46 1607.63 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
73. rpl11 ENSDARG00000043509 214.46 1607.63 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
74. pvalb4 ENSDARG00000024433 211.84 1587.99 parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
75. rps2 ENSDARG00000077291 210.27 1576.22 ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]
76. myhz2 ENSDARG00000012944 207.66 1556.65 myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
77. rpl23 ENSDARG00000053457 205.04 1537.01 ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-030131-8756]
78. rpl27 ENSDARG00000015128 204.52 1533.12 ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
79. rplp2 ENSDARG00000101406 204.00 1529.22 ribosomal protein, large P2 [Source:ZFIN;Acc:ZDB-GENE-031018-2]
80. rps9 ENSDARG00000011405, ENSDARG00000113248 201.91 1513.55 ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-010724-15]
81. rplp2l ENSDARG00000011201 195.63 1466.47 ribosomal protein, large P2, like [Source:ZFIN;Acc:ZDB-GENE-070327-2]
82. krt18 ENSDARG00000018404, ENSDARG00000109528 194.58 1458.60 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
83. ldb3b ENSDARG00000099974 190.92 1431.17 LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
84. rps20 ENSDARG00000036044 188.31 1411.60 ribosomal protein S20 [Source:ZFIN;Acc:ZDB-GENE-040426-2284]
85. rps14 ENSDARG00000036629 186.74 1399.83 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
86. rps27.1 ENSDARG00000023298 181.51 1360.63 ribosomal protein S27, isoform 1 [Source:ZFIN;Acc:ZDB-GENE-050522-549]
87. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 177.32 1329.22 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
88. rpsa ENSDARG00000019181 176.27 1321.35 ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
89. rpl18 ENSDARG00000029533 174.71 1309.65 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
90. hmgn2 ENSDARG00000099572 172.09 1290.01 high mobility group nucleosomal binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-051030-81]
91. rpl7 ENSDARG00000007320 170.52 1278.25 ribosomal protein L7 [Source:ZFIN;Acc:ZDB-GENE-030131-8654]
92. atp5g3b 168.95 1266.48 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
93. rps15 ENSDARG00000070849, ENSDARG00000110979 167.91 1258.68 ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-030131-9092]
94. AL954137.2 ENSDARG00000114408 167.38 1254.71
95. col1a1b ENSDARG00000035809 167.38 1254.71 collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]
96. rps6 ENSDARG00000019778 167.38 1254.71 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
97. zgc:92533 zgc:92533 167.38 1254.71
98. rpl6 ENSDARG00000058451 164.24 1231.17 ribosomal protein L6 [Source:ZFIN;Acc:ZDB-GENE-030131-8671]
99. rps15a ENSDARG00000010160 163.72 1227.27 ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
100. tmem38a ENSDARG00000024047 162.67 1219.40 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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