Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Zebrafish_40hpf_trunk1, section s1.

Sample reads: 133,401. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. AC024175.4 AC024175.4 16580.01 124286.89
2. krt4 ENSDARG00000017624, ENSDARG00000115790 7051.27 52857.65 keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
3. ckmb ENSDARG00000040565 3239.77 24285.93 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. actc1b ENSDARG00000099197 2477.47 18571.58 actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
5. tpma ENSDARG00000033683 2477.47 18571.58 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. pvalb2 ENSDARG00000002768, ENSDARG00000114085 2096.32 15714.41 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
7. mt-co2 ENSDARG00000063908 1905.75 14285.86 cytochrome c oxidase II, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-15]
8. mt-nd2 ENSDARG00000063899 1524.60 11428.69 NADH dehydrogenase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-8]
9. mylz3 ENSDARG00000017441 1524.60 11428.69 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
10. ckma ENSDARG00000035327, ENSDARG00000114671 1334.02 10000.07 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
11. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 1334.02 10000.07 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
12. mt-atp6 ENSDARG00000063911 1143.45 8571.52 ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
13. tnnc2 ENSDARG00000070835, ENSDARG00000111155 1143.45 8571.52 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
14. tnni2a.4 ENSDARG00000029069 1143.45 8571.52 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
15. atp2a1 ENSDARG00000020574 952.87 7142.89 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
16. cd99 ENSDARG00000051975 952.87 7142.89 CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
17. col1a1a ENSDARG00000012405, ENSDARG00000116113 952.87 7142.89 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
18. cyt1l ENSDARG00000036832 952.87 7142.89 type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
19. mt-nd1 ENSDARG00000063895 952.87 7142.89 NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]
20. nme2b.2 ENSDARG00000099420 952.87 7142.89 NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
21. si:dkey-151g10.6 si:dkey-151g10.6 952.87 7142.89
22. ttna ttna 952.87 7142.89
23. zgc:92533 zgc:92533 952.87 7142.89
24. mt-co3 ENSDARG00000063912 762.30 5714.34 cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
25. rpl18 ENSDARG00000029533 762.30 5714.34 ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]
26. rpl8 ENSDARG00000014867 762.30 5714.34 ribosomal protein L8 [Source:ZFIN;Acc:ZDB-GENE-040426-1670]
27. rps23 ENSDARG00000021838 762.30 5714.34 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
28. tmsb4x ENSDARG00000077777 762.30 5714.34 thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
29. zgc:193505 ENSDARG00000093584, ENSDARG00000109499 762.30 5714.34 zgc:193505 [Source:ZFIN;Acc:ZDB-GENE-030131-7103]
30. apoa1b ENSDARG00000101324 571.72 4285.72 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
31. bhmt ENSDARG00000013430 571.72 4285.72 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
32. cul3a ENSDARG00000038967 571.72 4285.72 cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
33. elmo1 ENSDARG00000098753 571.72 4285.72 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
34. gnai2a ENSDARG00000018174 571.72 4285.72 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
35. rpl15 ENSDARG00000009285 571.72 4285.72 ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
36. rps4x ENSDARG00000014690 571.72 4285.72 ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]
37. tcf12 ENSDARG00000004714 571.72 4285.72 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
38. AL954137.2 ENSDARG00000114408 381.15 2857.17
39. ATP5B 381.15 2857.17 ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
40. GJD2 GJD2 381.15 2857.17
41. PHLDB1 PHLDB1 381.15 2857.17
42. SATB1 SATB1 381.15 2857.17
43. actb1 ENSDARG00000037746, ENSDARG00000113649 381.15 2857.17 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
44. actb2 ENSDARG00000037870 381.15 2857.17 actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
45. aldoab ENSDARG00000034470 381.15 2857.17 aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
46. apoa1a ENSDARG00000012076, ENSDARG00000110395 381.15 2857.17 apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
47. apobb apobb 381.15 2857.17
48. apoc1l apoc1l 381.15 2857.17
49. apoeb ENSDARG00000040295 381.15 2857.17 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
50. ccng1 ENSDARG00000076667, ENSDARG00000110260 381.15 2857.17 cyclin G1 [Source:ZFIN;Acc:ZDB-GENE-020322-1]
51. cfl1 ENSDARG00000021124 381.15 2857.17 cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
52. crb3b ENSDARG00000068182 381.15 2857.17 crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
53. cyb5r3 ENSDARG00000005891 381.15 2857.17 cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
54. desma ENSDARG00000058656 381.15 2857.17 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
55. eef1a1l1 ENSDARG00000020850 381.15 2857.17 eukaryotic translation elongation factor 1 alpha 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-990415-52]
56. eef2b ENSDARG00000100371, ENSDARG00000109247 381.15 2857.17 eukaryotic translation elongation factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5128]
57. eno1a ENSDARG00000022456, ENSDARG00000116458 381.15 2857.17 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
58. fgfr4 ENSDARG00000069105 381.15 2857.17 fibroblast growth factor receptor 4 [Source:ZFIN;Acc:ZDB-GENE-980526-488]
59. gamt ENSDARG00000070844, ENSDARG00000109945 381.15 2857.17 guanidinoacetate N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-051030-97]
60. glula ENSDARG00000099776 381.15 2857.17 glutamate-ammonia ligase (glutamine synthase) a [Source:ZFIN;Acc:ZDB-GENE-030131-688]
61. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 381.15 2857.17 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
62. hspa8 ENSDARG00000068992, ENSDARG00000114726 381.15 2857.17 heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
63. jph1b ENSDARG00000038826 381.15 2857.17 junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
64. krt8 ENSDARG00000058358, ENSDARG00000109279 381.15 2857.17 keratin 8 [Source:ZFIN;Acc:ZDB-GENE-030411-5]
65. lman2 ENSDARG00000061854 381.15 2857.17 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
66. meaf6 ENSDARG00000101216 381.15 2857.17 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
67. mt-co1 ENSDARG00000063905 381.15 2857.17 cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
68. mt-cyb ENSDARG00000063924 381.15 2857.17 cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
69. mt-nd3 ENSDARG00000063914 381.15 2857.17 NADH dehydrogenase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-9]
70. mt-nd4 ENSDARG00000063917 381.15 2857.17 NADH dehydrogenase 4, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-10]
71. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 381.15 2857.17 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
72. mylpfb ENSDARG00000002589 381.15 2857.17 myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
73. myoz1b ENSDARG00000071445 381.15 2857.17 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
74. phlda3 ENSDARG00000037804 381.15 2857.17 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
75. pmela ENSDARG00000091298 381.15 2857.17 premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
76. ptrh1 ENSDARG00000098206, ENSDARG00000110279 381.15 2857.17 peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
77. qdpra ENSDARG00000040190 381.15 2857.17 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
78. rbfox1l ENSDARG00000021184, ENSDARG00000111700 381.15 2857.17 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
79. rpl10a ENSDARG00000042905, ENSDARG00000115649 381.15 2857.17 ribosomal protein L10a [Source:ZFIN;Acc:ZDB-GENE-030131-2025]
80. rpl11 ENSDARG00000043509 381.15 2857.17 ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040625-147]
81. rpl18a ENSDARG00000025073 381.15 2857.17 ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]
82. rpl21 ENSDARG00000010516, ENSDARG00000110263 381.15 2857.17 ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-030131-8512]
83. rpl36 ENSDARG00000100588 381.15 2857.17 ribosomal protein L36 [Source:ZFIN;Acc:ZDB-GENE-040622-2]
84. rps14 ENSDARG00000036629 381.15 2857.17 ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631]
85. rps28 ENSDARG00000035860 381.15 2857.17 ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
86. rps6 ENSDARG00000019778 381.15 2857.17 ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
87. si:ch211-207e19.11 si:ch211-207e19.11 381.15 2857.17
88. si:ch211-226o13.2 381.15 2857.17 si:ch211-226o13.2
89. sox21b ENSDARG00000008540 381.15 2857.17 SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
90. tex2 ENSDARG00000078186 381.15 2857.17 testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
91. tmem223 ENSDARG00000069494 381.15 2857.17 transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
92. tnnt3a ENSDARG00000030270 381.15 2857.17 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
93. tnw 381.15 2857.17 tenascin W, transcript variant X2
94. tpm3 ENSDARG00000005162 381.15 2857.17 tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
95. zgc:113413 zgc:113413 381.15 2857.17
96. zgc:153129 zgc:153129 381.15 2857.17
97. zgc:161979_1 zgc:161979_1 381.15 2857.17
98. zgc:66286 zgc:66286 381.15 2857.17
99. AC024175.17 AC024175.17 190.57 1428.55
100. AL929434.1 AL929434.1 190.57 1428.55
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA